RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 OR5D18Q8NGL1 313 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 OR13C3Q8NGS6 347 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 KIR2DL5BQ8NHK3 375 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 CT45A3Q8NHU0 189 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 GHSRQ92847 366 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 C17orf77Q96MU5 243 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 CLCC1Q96S66 551 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 PHB2Q99623 299 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 TTTY10Q9BZA0 68 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 METTL9Q9H1A3 318 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 FBXL15Q9H469 300 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 COA4Q9NYJ1 87 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 PIPOXQ9P0Z9 390 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 ABRACLQ9P1F3 81 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 ABCD2Q9UBJ2 740 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 METTL1Q9UBP6 276 aaKnown RBP4.3□□□□□ -1.72
USP49-205ENST00000448078 ST3GAL6Q9Y274 331 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 EXOSC1Q9Y3B2 195 aaKnown RBP4.3□□□□□ -1.72
USP49-205ENST00000448078 ALMS1Q8TCU4 4167 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 TRAV25A0A0B4J276 109 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 ZNF320A2RRD8 509 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 OR5H14A6NHG9 310 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 RAB29O14966 203 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 CA11O75493 328 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 SRSF10O75494 262 aaKnown RBP4.29□□□□□ -1.72
USP49-205ENST00000448078 NDUFA3O95167 84 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 IFNA21P01568 189 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 IFNA17P01571 189 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 MT-ND4P03905 459 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 ISG15P05161 165 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 P0DMU3 169 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 FAM231AP0DMU4 169 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 FAM231CP0DMU5 169 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 FOLR2P14207 255 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 SLC2A5P22732 501 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 VHLP40337 213 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 CBX3Q13185 183 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 SLC25A30Q5SVS4 291 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 ZNF691Q5VV52 312 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 LAMTOR1Q6IAA8 161 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 OR4A47Q6IF82 309 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 GID4Q8IVV7 300 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 GVQW1Q8N7I0 195 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 MAPKAPK5-AS1Q8N8E1 139 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 BBS1Q8NFJ9 593 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 OR13C9Q8NGT0 318 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 OR52N1Q8NH53 320 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 GRPEL2Q8TAA5 225 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 TNFAIP8L1Q8WVP5 186 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 DNAJC9Q8WXX5 260 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 GALMQ96C23 342 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 ADAT3Q96EY9 351 aaPredicted RBP4.29□□□□□ -1.72
USP49-205ENST00000448078 PELI1Q96FA3 418 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 RARRES2Q99969 163 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 FAM192AQ9GZU8 254 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 WARS2Q9UGM6 360 aaKnown RBP4.29□□□□□ -1.72
USP49-205ENST00000448078 GNG8Q9UK08 70 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 FRAS1Q86XX4 4008 aa4.29□□□□□ -1.72
USP49-205ENST00000448078 IGKV1-9A0A0C4DH69 117 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 IGKV1-12A0A0C4DH73 117 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 FAM223BA6NKX1 122 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 C15orf65H3BRN8 121 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 FCN1O00602 326 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 MAGEB4O15481 346 aaPredicted RBP4.28□□□□□ -1.72
USP49-205ENST00000448078 GGCTO75223 188 aaKnown RBP4.28□□□□□ -1.72
USP49-205ENST00000448078 CST1P01037 141 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 IFNA10P01566 189 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 IGKV1D-12P01611 117 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 HBZP02008 142 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 VPREB1P12018 145 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 RAB3AP20336 220 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 CBLN1P23435 193 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 MFAP4P55083 255 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 PPP1R8Q12972 351 aaKnown RBP4.28□□□□□ -1.72
USP49-205ENST00000448078 MPV17LQ2QL34 196 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 DEFB135Q30KP9 77 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 MORN2Q502X0 79 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 FFAR4Q5NUL3 377 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 SYT6Q5T7P8 510 aaPredicted RBP4.28□□□□□ -1.72
USP49-205ENST00000448078 FAM71F2Q6NXP2 309 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 ZNF554Q86TJ5 538 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 DHFR2Q86XF0 187 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 FAM223AQ8IWN6 122 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 OR10H4Q8NGA5 316 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 OR1L6Q8NGR2 347 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 OR13C5Q8NGS8 318 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 OR4A5Q8NH83 315 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 PLPPR1Q8TBJ4 325 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 FCAMRQ8WWV6 532 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 MARC2Q969Z3 335 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 LGALS12Q96DT0 336 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 NIPSNAP1Q9BPW8 284 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 SULT4A1Q9BR01 284 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 SRSF8Q9BRL6 282 aaKnown RBP4.28□□□□□ -1.72
USP49-205ENST00000448078 FAM103A1Q9BTL3 118 aaKnown RBP4.28□□□□□ -1.72
USP49-205ENST00000448078 HRH4Q9H3N8 390 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 RIBC2Q9H4K1 309 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 WASHC3Q9Y3C0 194 aa4.28□□□□□ -1.72
USP49-205ENST00000448078 SNTNA6NMZ2 147 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 MPTX1A8MV57 137 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms