RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 FAM71E2Q8N5Q1 922 aa13.99□□□□□ -0.17
CCDC188-201ENST00000439765 OR8H1Q8NGG4 311 aa13.99□□□□□ -0.17
CCDC188-201ENST00000439765 CHPT1Q8WUD6 406 aa13.99□□□□□ -0.17
CCDC188-201ENST00000439765 RASL11BQ9BPW5 248 aa13.99□□□□□ -0.17
CCDC188-201ENST00000439765 SLC2A9Q9NRM0 540 aa13.99□□□□□ -0.17
CCDC188-201ENST00000439765 LIN7CQ9NUP9 197 aaKnown RBP13.99□□□□□ -0.17
CCDC188-201ENST00000439765 WASHC3Q9Y3C0 194 aa13.99□□□□□ -0.17
CCDC188-201ENST00000439765 TSPAN15O95858 294 aa13.98□□□□□ -0.17
CCDC188-201ENST00000439765 CD28P10747 220 aa13.98□□□□□ -0.17
CCDC188-201ENST00000439765 RND3P61587 244 aa13.98□□□□□ -0.17
CCDC188-201ENST00000439765 EIF4EBP1Q13541 118 aaPredicted RBP13.98□□□□□ -0.17
CCDC188-201ENST00000439765 C2orf68Q2NKX9 166 aa13.98□□□□□ -0.17
CCDC188-201ENST00000439765 TRIM16LQ309B1 348 aa13.98□□□□□ -0.17
CCDC188-201ENST00000439765 SLC35E3Q7Z769 313 aa13.98□□□□□ -0.17
CCDC188-201ENST00000439765 TMED4Q7Z7H5 227 aa13.98□□□□□ -0.17
CCDC188-201ENST00000439765 CENPSQ8N2Z9 138 aa13.98□□□□□ -0.17
CCDC188-201ENST00000439765 ZNF383Q8NA42 475 aa13.98□□□□□ -0.17
CCDC188-201ENST00000439765 ADAD2Q8NCV1 583 aaKnown RBP13.98□□□□□ -0.17
CCDC188-201ENST00000439765 WIPF2Q8TF74 440 aaPredicted RBP13.98□□□□□ -0.17
CCDC188-201ENST00000439765 NOL4LQ96MY1 436 aaPredicted RBP13.98□□□□□ -0.17
CCDC188-201ENST00000439765 MARVELD1Q9BSK0 173 aa13.98□□□□□ -0.17
CCDC188-201ENST00000439765 LINC00527Q9UJ94 153 aa13.98□□□□□ -0.17
CCDC188-201ENST00000439765 NBR2O15453 112 aa13.97□□□□□ -0.17
CCDC188-201ENST00000439765 TNFSF12O43508 249 aa13.97□□□□□ -0.17
CCDC188-201ENST00000439765 PGLYRP1O75594 196 aaPredicted RBP13.97□□□□□ -0.17
CCDC188-201ENST00000439765 S100GP29377 79 aa13.97□□□□□ -0.17
CCDC188-201ENST00000439765 C10orf99Q6UWK7 81 aa13.97□□□□□ -0.17
CCDC188-201ENST00000439765 ZNF66Q6ZN08 573 aa13.97□□□□□ -0.17
CCDC188-201ENST00000439765 CENPVQ7Z7K6 275 aaPredicted RBP13.97□□□□□ -0.17
CCDC188-201ENST00000439765 SLC25A42Q86VD7 318 aa13.97□□□□□ -0.17
CCDC188-201ENST00000439765 CCDC71LQ8N9Z2 235 aa13.97□□□□□ -0.17
CCDC188-201ENST00000439765 MINDY2Q8NBR6 621 aa13.97□□□□□ -0.17
CCDC188-201ENST00000439765 OR5AN1Q8NGI8 311 aa13.97□□□□□ -0.17
CCDC188-201ENST00000439765 TMEM230Q96A57 120 aa13.97□□□□□ -0.17
CCDC188-201ENST00000439765 GPHA2Q96T91 129 aa13.97□□□□□ -0.17
CCDC188-201ENST00000439765 HSPB9Q9BQS6 159 aa13.97□□□□□ -0.17
CCDC188-201ENST00000439765 LINC01548A6NM66 108 aa13.96□□□□□ -0.17
CCDC188-201ENST00000439765 INMT-MINDY4F8WBC2 141 aa13.96□□□□□ -0.17
CCDC188-201ENST00000439765 MPPED1O15442 326 aa13.96□□□□□ -0.17
CCDC188-201ENST00000439765 IGHG2P01859 326 aa13.96□□□□□ -0.17
CCDC188-201ENST00000439765 APOA2P02652 100 aa13.96□□□□□ -0.17
CCDC188-201ENST00000439765 AKR1C4P17516 323 aa13.96□□□□□ -0.17
CCDC188-201ENST00000439765 DUTP33316 252 aaKnown RBP13.96□□□□□ -0.17
CCDC188-201ENST00000439765 MECP2P51608 486 aaKnown RBP13.96□□□□□ -0.17
CCDC188-201ENST00000439765 DHODHQ02127 395 aa13.96□□□□□ -0.17
CCDC188-201ENST00000439765 OR5AU1Q8NGC0 362 aa13.96□□□□□ -0.17
CCDC188-201ENST00000439765 HSD17B10Q99714 261 aaKnown RBP13.96□□□□□ -0.17
CCDC188-201ENST00000439765 ALX4Q9H161 411 aaPredicted RBP13.96□□□□□ -0.17
CCDC188-201ENST00000439765 PRKDCP78527 4128 aaKnown RBP13.96□□□□□ -0.18
CCDC188-201ENST00000439765 IGKV1-16P04430 117 aa13.95□□□□□ -0.18
CCDC188-201ENST00000439765 ANXA7P20073 488 aaKnown RBP13.95□□□□□ -0.18
CCDC188-201ENST00000439765 MC5RP33032 325 aa13.95□□□□□ -0.18
CCDC188-201ENST00000439765 RAB25P57735 213 aa13.95□□□□□ -0.18
CCDC188-201ENST00000439765 TAS2R31P59538 309 aa13.95□□□□□ -0.18
CCDC188-201ENST00000439765 RPL30P62888 115 aaKnown RBP13.95□□□□□ -0.18
CCDC188-201ENST00000439765 TMEM128Q5BJH2 165 aa13.95□□□□□ -0.18
CCDC188-201ENST00000439765 TBC1D26Q86UD7 250 aa13.95□□□□□ -0.18
CCDC188-201ENST00000439765 FOXRED2Q8IWF2 684 aa13.95□□□□□ -0.18
CCDC188-201ENST00000439765 CITED2Q99967 270 aaPredicted RBP13.95□□□□□ -0.18
CCDC188-201ENST00000439765 KIAA1456Q9P272 454 aa13.95□□□□□ -0.18
CCDC188-201ENST00000439765 CRYM-AS1A6NIL9 109 aa13.94□□□□□ -0.18
CCDC188-201ENST00000439765 LINC00473A8K010 186 aa13.94□□□□□ -0.18
CCDC188-201ENST00000439765 THBS3P49746 956 aa13.94□□□□□ -0.18
CCDC188-201ENST00000439765 UBE2MP61081 183 aaKnown RBP13.94□□□□□ -0.18
CCDC188-201ENST00000439765 ZNF329Q86UD4 541 aa13.94□□□□□ -0.18
CCDC188-201ENST00000439765 PDPNQ86YL7 162 aa13.94□□□□□ -0.18
CCDC188-201ENST00000439765 ADTRPQ96IZ2 230 aa13.94□□□□□ -0.18
CCDC188-201ENST00000439765 NAA60Q9H7X0 242 aa13.94□□□□□ -0.18
CCDC188-201ENST00000439765 SLC35D1Q9NTN3 355 aa13.94□□□□□ -0.18
CCDC188-201ENST00000439765 TEX13DA0A0J9YY54 714 aaPredicted RBP13.93□□□□□ -0.18
CCDC188-201ENST00000439765 PSMB11A5LHX3 300 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 NDUFA3O95167 84 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 OR4E1P0C645 316 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 F2RP25116 425 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 CATR1Q13166 79 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 PLGLAQ15195 96 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 C5orf64Q2M2E5 130 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 NSUN5P1Q3KNT7 163 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 KHDC1LQ5JSQ8 128 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 KCTD9Q7L273 389 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 SGPP2Q8IWX5 399 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 FBXL15Q9H469 300 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 A0A1W2PRX2 142 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 AP4M1O00189 453 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 DHFRP00374 187 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 IL5P05113 134 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 SUPT4H1P63272 117 aaKnown RBP13.93□□□□□ -0.18
CCDC188-201ENST00000439765 TCTEX1D4Q5JR98 221 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 STPG2Q8N412 459 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 NPBQ8NG41 125 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 OR4X2Q8NGF9 303 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 OR51H1Q8NH63 302 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 TCTEX1D2Q8WW35 142 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 DDB2Q92466 427 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 KCNIP3Q9Y2W7 256 aa13.93□□□□□ -0.18
CCDC188-201ENST00000439765 C3orf85A0A1B0GTC6 90 aa13.92□□□□□ -0.18
CCDC188-201ENST00000439765 RRHO14718 337 aa13.92□□□□□ -0.18
CCDC188-201ENST00000439765 HLA-DRB1P01911 266 aa13.92□□□□□ -0.18
CCDC188-201ENST00000439765 RPS16P62249 146 aaKnown RBP13.92□□□□□ -0.18
CCDC188-201ENST00000439765 TAGLNQ01995 201 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms