RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 TMEM147Q9BVK8 224 aa9.64□□□□□ -0.87
SMAD3-202ENST00000439724 SCRT1Q9BWW7 348 aa9.64□□□□□ -0.87
SMAD3-202ENST00000439724 WDR61Q9GZS3 305 aaKnown RBP9.64□□□□□ -0.87
SMAD3-202ENST00000439724 MS4A7Q9GZW8 240 aaPredicted RBP9.64□□□□□ -0.87
SMAD3-202ENST00000439724 CBLN4Q9NTU7 201 aa9.64□□□□□ -0.87
SMAD3-202ENST00000439724 A0A1B0GW64 132 aa9.63□□□□□ -0.87
SMAD3-202ENST00000439724 C15orf61A6NNL5 157 aa9.63□□□□□ -0.87
SMAD3-202ENST00000439724 FAM157AC9JC47 383 aa9.63□□□□□ -0.87
SMAD3-202ENST00000439724 IFNA17P01571 189 aa9.63□□□□□ -0.87
SMAD3-202ENST00000439724 AGAP20933 346 aa9.63□□□□□ -0.87
SMAD3-202ENST00000439724 GNB2P62879 340 aa9.63□□□□□ -0.87
SMAD3-202ENST00000439724 SERF2P84101 59 aa9.63□□□□□ -0.87
SMAD3-202ENST00000439724 TAGLNQ01995 201 aaKnown RBP9.63□□□□□ -0.87
SMAD3-202ENST00000439724 SP5Q6BEB4 398 aaPredicted RBP9.63□□□□□ -0.87
SMAD3-202ENST00000439724 OR8G2PQ6IF36 304 aa9.63□□□□□ -0.87
SMAD3-202ENST00000439724 OR4A47Q6IF82 309 aa9.63□□□□□ -0.87
SMAD3-202ENST00000439724 C11orf71Q6IPW1 123 aa9.63□□□□□ -0.87
SMAD3-202ENST00000439724 VKORC1L1Q8N0U8 176 aa9.63□□□□□ -0.87
SMAD3-202ENST00000439724 PUSL1Q8N0Z8 303 aaKnown RBP9.63□□□□□ -0.87
SMAD3-202ENST00000439724 SVBPQ8N300 66 aa9.63□□□□□ -0.87
SMAD3-202ENST00000439724 OR10P1Q8NGE3 313 aa9.63□□□□□ -0.87
SMAD3-202ENST00000439724 RHOVQ96L33 236 aa9.63□□□□□ -0.87
SMAD3-202ENST00000439724 CLCC1Q96S66 551 aa9.63□□□□□ -0.87
SMAD3-202ENST00000439724 RAB1BQ9H0U4 201 aa9.63□□□□□ -0.87
SMAD3-202ENST00000439724 SLC35D1Q9NTN3 355 aa9.63□□□□□ -0.87
SMAD3-202ENST00000439724 FOXA2Q9Y261 457 aaPredicted RBP9.63□□□□□ -0.87
SMAD3-202ENST00000439724 TIMM9Q9Y5J7 89 aa9.63□□□□□ -0.87
SMAD3-202ENST00000439724 TRAV3A0A0B4J244 114 aa9.62□□□□□ -0.87
SMAD3-202ENST00000439724 UBE2L5PA0A1B0GUS4 154 aa9.62□□□□□ -0.87
SMAD3-202ENST00000439724 C15orf62A8K5M9 175 aa9.62□□□□□ -0.87
SMAD3-202ENST00000439724 F8W036 122 aa9.62□□□□□ -0.87
SMAD3-202ENST00000439724 GPR37O15354 613 aa9.62□□□□□ -0.87
SMAD3-202ENST00000439724 IL6RP08887 468 aaPredicted RBP9.62□□□□□ -0.87
SMAD3-202ENST00000439724 H2AFB1P0C5Y9 115 aa9.62□□□□□ -0.87
SMAD3-202ENST00000439724 VDAC2P45880 294 aaPredicted RBP9.62□□□□□ -0.87
SMAD3-202ENST00000439724 ZNF137PP52743 207 aa9.62□□□□□ -0.87
SMAD3-202ENST00000439724 ERVFRD-1P60508 538 aa9.62□□□□□ -0.87
SMAD3-202ENST00000439724 RPP30P78346 268 aaKnown RBP9.62□□□□□ -0.87
SMAD3-202ENST00000439724 DEFA5Q01523 94 aa9.62□□□□□ -0.87
SMAD3-202ENST00000439724 PEA15Q15121 130 aa9.62□□□□□ -0.87
SMAD3-202ENST00000439724 GUK1Q16774 197 aa9.62□□□□□ -0.87
SMAD3-202ENST00000439724 VWC2Q2TAL6 325 aa9.62□□□□□ -0.87
SMAD3-202ENST00000439724 SPSB3Q6PJ21 355 aa9.62□□□□□ -0.87
SMAD3-202ENST00000439724 CENPVQ7Z7K6 275 aaPredicted RBP9.62□□□□□ -0.87
SMAD3-202ENST00000439724 SUN5Q8TC36 379 aa9.62□□□□□ -0.87
SMAD3-202ENST00000439724 TAF15Q92804 592 aaKnown RBP eCLIP9.62□□□□□ -0.87
SMAD3-202ENST00000439724 RSG1Q9BU20 258 aa9.62□□□□□ -0.87
SMAD3-202ENST00000439724 ZNRD1Q9P1U0 126 aa9.62□□□□□ -0.87
SMAD3-202ENST00000439724 RALYQ9UKM9 306 aaKnown RBP9.62□□□□□ -0.87
SMAD3-202ENST00000439724 TCF19Q9Y242 345 aa9.62□□□□□ -0.87
SMAD3-202ENST00000439724 FBXO7Q9Y3I1 522 aa9.62□□□□□ -0.87
SMAD3-202ENST00000439724 ANKHD1Q8IWZ3 2542 aaKnown RBP9.62□□□□□ -0.87
SMAD3-202ENST00000439724 ATRXP46100 2492 aa9.62□□□□□ -0.87
SMAD3-202ENST00000439724 TRAV1-1A0A0B4J248 108 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 LYNX1G3V0Z9 82 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 J3QR06 171 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 HBE1P02100 147 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 SFTA3P0C7M3 94 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 LYNX1P0DP58 116 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 TLE4Q04727 773 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 SPINK9Q5DT21 86 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 ATRAIDQ6UW56 229 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 ZNF841Q6ZN19 808 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 DTX2Q86UW9 622 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 OR13D1Q8NGV5 346 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 OR9G1Q8NH87 305 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 NEU4Q8WWR8 484 aaPredicted RBP9.61□□□□□ -0.87
SMAD3-202ENST00000439724 ITLN2Q8WWU7 325 aaPredicted RBP9.61□□□□□ -0.87
SMAD3-202ENST00000439724 TMEM186Q96B77 213 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 AIFM2Q9BRQ8 373 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 PBDC1Q9BVG4 233 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 MRPL20Q9BYC9 149 aaKnown RBP9.61□□□□□ -0.87
SMAD3-202ENST00000439724 TMEM14BQ9NUH8 114 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 KIAA1456Q9P272 454 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 NCOR2Q9Y618 2525 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 LAMA5O15230 3695 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 TET2Q6N021 2002 aaPredicted RBP9.61□□□□□ -0.87
SMAD3-202ENST00000439724 DOCK11Q5JSL3 2073 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 MED19A0JLT2 244 aaPredicted RBP9.61□□□□□ -0.87
SMAD3-202ENST00000439724 C9JQL5 133 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 APOA2P02652 100 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 IGHV1-8P0DP01 117 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 HSPE1P61604 102 aaKnown RBP9.61□□□□□ -0.87
SMAD3-202ENST00000439724 GUCA2BQ16661 112 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 C11orf42Q8N5U0 333 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 OR5AN1Q8NGI8 311 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 C8orf46Q8TAG6 207 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 OSR1Q8TAX0 266 aaPredicted RBP9.61□□□□□ -0.87
SMAD3-202ENST00000439724 ST6GALNAC6Q969X2 333 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 NKX6-2Q9C056 277 aaPredicted RBP9.61□□□□□ -0.87
SMAD3-202ENST00000439724 SMDT1Q9H4I9 107 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 BET1LQ9NYM9 111 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 PRNDQ9UKY0 176 aa9.61□□□□□ -0.87
SMAD3-202ENST00000439724 H0YJW9 148 aa9.6□□□□□ -0.87
SMAD3-202ENST00000439724 UPK2O00526 184 aa9.6□□□□□ -0.87
SMAD3-202ENST00000439724 RBP4P02753 201 aa9.6□□□□□ -0.87
SMAD3-202ENST00000439724 MDKP21741 143 aaPredicted RBP9.6□□□□□ -0.87
SMAD3-202ENST00000439724 GNLYP22749 145 aa9.6□□□□□ -0.87
SMAD3-202ENST00000439724 UQCRFS1P47985 274 aa9.6□□□□□ -0.87
SMAD3-202ENST00000439724 RAB2AP61019 212 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms