RNA–Protein interactions for RNA: ENST00000439512.5

TOM1-207, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-207ENST00000439512 SOX15O60248 233 aa12.87□□□□□ -0.35
TOM1-207ENST00000439512 GNRHRP30968 328 aa12.87□□□□□ -0.35
TOM1-207ENST00000439512 RCVRNP35243 200 aa12.87□□□□□ -0.35
TOM1-207ENST00000439512 MYCNOSP40205 109 aa12.87□□□□□ -0.35
TOM1-207ENST00000439512 SSBP2P81877 361 aaPredicted RBP12.87□□□□□ -0.35
TOM1-207ENST00000439512 KIAA0141Q14154 515 aaPredicted RBP12.87□□□□□ -0.35
TOM1-207ENST00000439512 PRSS8Q16651 343 aa12.87□□□□□ -0.35
TOM1-207ENST00000439512 ZNF818PQ6ZRF7 136 aa12.87□□□□□ -0.35
TOM1-207ENST00000439512 LAX1Q8IWV1 398 aa12.87□□□□□ -0.35
TOM1-207ENST00000439512 VKORC1L1Q8N0U8 176 aa12.87□□□□□ -0.35
TOM1-207ENST00000439512 TCTEX1D1Q8N7M0 179 aa12.87□□□□□ -0.35
TOM1-207ENST00000439512 OR52I2Q8NH67 350 aa12.87□□□□□ -0.35
TOM1-207ENST00000439512 OR4S2Q8NH73 311 aa12.87□□□□□ -0.35
TOM1-207ENST00000439512 MOB3AQ96BX8 217 aa12.87□□□□□ -0.35
TOM1-207ENST00000439512 CCDC59Q9P031 241 aaKnown RBP12.87□□□□□ -0.35
TOM1-207ENST00000439512 KLK11Q9UBX7 282 aa12.87□□□□□ -0.35
TOM1-207ENST00000439512 PRKDCP78527 4128 aaKnown RBP12.86□□□□□ -0.35
TOM1-207ENST00000439512 CCDC160A6NGH7 325 aa12.86□□□□□ -0.35
TOM1-207ENST00000439512 CCL24O00175 119 aa12.86□□□□□ -0.35
TOM1-207ENST00000439512 TPPPO94811 219 aa12.86□□□□□ -0.35
TOM1-207ENST00000439512 SAA1P0DJI8 122 aaPredicted RBP12.86□□□□□ -0.35
TOM1-207ENST00000439512 IGLL1P15814 213 aa12.86□□□□□ -0.35
TOM1-207ENST00000439512 MRGPRG-AS1Q2M3A8 158 aa12.86□□□□□ -0.35
TOM1-207ENST00000439512 DEFB136Q30KP8 78 aa12.86□□□□□ -0.35
TOM1-207ENST00000439512 ETV3LQ6ZN32 361 aa12.86□□□□□ -0.35
TOM1-207ENST00000439512 MRPL41Q8IXM3 137 aaKnown RBP12.86□□□□□ -0.35
TOM1-207ENST00000439512 SPAG16Q8N0X2 631 aa12.86□□□□□ -0.35
TOM1-207ENST00000439512 ZNF491Q8N8L2 437 aa12.86□□□□□ -0.35
TOM1-207ENST00000439512 OR5T1Q8NG75 326 aa12.86□□□□□ -0.35
TOM1-207ENST00000439512 C15orf40Q8WUR7 153 aa12.86□□□□□ -0.35
TOM1-207ENST00000439512 FCAMRQ8WWV6 532 aa12.86□□□□□ -0.35
TOM1-207ENST00000439512 RAX2Q96IS3 184 aa12.86□□□□□ -0.35
TOM1-207ENST00000439512 UBE2E2Q96LR5 201 aa12.86□□□□□ -0.35
TOM1-207ENST00000439512 MS4A10Q96PG2 267 aa12.86□□□□□ -0.35
TOM1-207ENST00000439512 OR5B12Q96R08 314 aa12.86□□□□□ -0.35
TOM1-207ENST00000439512 MSGN1A6NI15 193 aa12.85□□□□□ -0.35
TOM1-207ENST00000439512 M0QYG6 137 aa12.85□□□□□ -0.35
TOM1-207ENST00000439512 CD40LGP29965 261 aa12.85□□□□□ -0.35
TOM1-207ENST00000439512 KIR2DS2P43631 304 aa12.85□□□□□ -0.35
TOM1-207ENST00000439512 CATR1Q13166 79 aa12.85□□□□□ -0.35
TOM1-207ENST00000439512 TNXAQ16473 311 aa12.85□□□□□ -0.35
TOM1-207ENST00000439512 SAMD5Q5TGI4 173 aa12.85□□□□□ -0.35
TOM1-207ENST00000439512 LINC00482Q8N8I6 264 aa12.85□□□□□ -0.35
TOM1-207ENST00000439512 OR5M8Q8NGP6 311 aa12.85□□□□□ -0.35
TOM1-207ENST00000439512 OR51H1Q8NH63 302 aa12.85□□□□□ -0.35
TOM1-207ENST00000439512 MYOZ3Q8TDC0 251 aa12.85□□□□□ -0.35
TOM1-207ENST00000439512 BORCS5Q969J3 196 aa12.85□□□□□ -0.35
TOM1-207ENST00000439512 DIRAS2Q96HU8 199 aa12.85□□□□□ -0.35
TOM1-207ENST00000439512 C6orf62Q9GZU0 229 aaPredicted RBP12.85□□□□□ -0.35
TOM1-207ENST00000439512 GNB4Q9HAV0 340 aa12.85□□□□□ -0.35
TOM1-207ENST00000439512 ZNF355PQ9NSJ1 428 aa12.85□□□□□ -0.35
TOM1-207ENST00000439512 VSIG4Q9Y279 399 aa12.85□□□□□ -0.35
TOM1-207ENST00000439512 WIPF1O43516 503 aa12.84□□□□□ -0.35
TOM1-207ENST00000439512 RAMP3O60896 148 aa12.84□□□□□ -0.35
TOM1-207ENST00000439512 ACTL6BO94805 426 aa12.84□□□□□ -0.35
TOM1-207ENST00000439512 OR2A4O95047 310 aa12.84□□□□□ -0.35
TOM1-207ENST00000439512 HRASP01112 189 aa12.84□□□□□ -0.35
TOM1-207ENST00000439512 RAB25P57735 213 aa12.84□□□□□ -0.35
TOM1-207ENST00000439512 AADACL3Q5VUY0 350 aa12.84□□□□□ -0.35
TOM1-207ENST00000439512 C4orf3Q8WVX3 66 aa12.84□□□□□ -0.35
TOM1-207ENST00000439512 OR2A7Q96R45 310 aa12.84□□□□□ -0.35
TOM1-207ENST00000439512 P2RX4Q99571 388 aa12.84□□□□□ -0.35
TOM1-207ENST00000439512 PHB2Q99623 299 aa12.84□□□□□ -0.35
TOM1-207ENST00000439512 SLIRPQ9GZT3 109 aaKnown RBP12.84□□□□□ -0.35
TOM1-207ENST00000439512 ZNF430Q9H8G1 570 aaPredicted RBP12.84□□□□□ -0.35
TOM1-207ENST00000439512 MTFP1Q9UDX5 166 aa12.84□□□□□ -0.35
TOM1-207ENST00000439512 PGLYRP1O75594 196 aaPredicted RBP12.83□□□□□ -0.36
TOM1-207ENST00000439512 IFNA6P05013 189 aa12.83□□□□□ -0.36
TOM1-207ENST00000439512 APELAP0DMC3 54 aa12.83□□□□□ -0.36
TOM1-207ENST00000439512 BEAN1Q3B7T3 259 aa12.83□□□□□ -0.36
TOM1-207ENST00000439512 KPRPQ5T749 579 aaPredicted RBP12.83□□□□□ -0.36
TOM1-207ENST00000439512 PYHIN1Q6K0P9 492 aa12.83□□□□□ -0.36
TOM1-207ENST00000439512 SSX9Q7RTT3 188 aa12.83□□□□□ -0.36
TOM1-207ENST00000439512 MMD2Q8IY49 270 aa12.83□□□□□ -0.36
TOM1-207ENST00000439512 CMTM1Q8IZ96 169 aa12.83□□□□□ -0.36
TOM1-207ENST00000439512 POC5Q8NA72 575 aa12.83□□□□□ -0.36
TOM1-207ENST00000439512 MCFD2Q8NI22 146 aa12.83□□□□□ -0.36
TOM1-207ENST00000439512 RHOVQ96L33 236 aa12.83□□□□□ -0.36
TOM1-207ENST00000439512 GABARAPH6UMI1 98 aa12.82□□□□□ -0.36
TOM1-207ENST00000439512 GPR31O00270 319 aa12.82□□□□□ -0.36
TOM1-207ENST00000439512 RBFOX2O43251 390 aaKnown RBP eCLIP12.82□□□□□ -0.36
TOM1-207ENST00000439512 CREBL2O60519 120 aaPredicted RBP12.82□□□□□ -0.36
TOM1-207ENST00000439512 TRGV3P03979 118 aa12.82□□□□□ -0.36
TOM1-207ENST00000439512 CD3DP04234 171 aa12.82□□□□□ -0.36
TOM1-207ENST00000439512 TPPP2P59282 170 aa12.82□□□□□ -0.36
TOM1-207ENST00000439512 DGCR2P98153 550 aa12.82□□□□□ -0.36
TOM1-207ENST00000439512 RNASE10Q5GAN6 216 aaKnown RBP12.82□□□□□ -0.36
TOM1-207ENST00000439512 VAX1Q5SQQ9 334 aa12.82□□□□□ -0.36
TOM1-207ENST00000439512 ASPHD1Q5U4P2 390 aa12.82□□□□□ -0.36
TOM1-207ENST00000439512 LPCAT3Q6P1A2 487 aa12.82□□□□□ -0.36
TOM1-207ENST00000439512 OR11H1Q8NG94 326 aa12.82□□□□□ -0.36
TOM1-207ENST00000439512 OR1N2Q8NGR9 330 aa12.82□□□□□ -0.36
TOM1-207ENST00000439512 VSTM2AQ8TAG5 236 aa12.82□□□□□ -0.36
TOM1-207ENST00000439512 SRSF12Q8WXF0 261 aaKnown RBP12.82□□□□□ -0.36
TOM1-207ENST00000439512 RCC1LQ96I51 464 aaKnown RBP12.82□□□□□ -0.36
TOM1-207ENST00000439512 TMEM68Q96MH6 324 aa12.82□□□□□ -0.36
TOM1-207ENST00000439512 AIFM2Q9BRQ8 373 aa12.82□□□□□ -0.36
TOM1-207ENST00000439512 TINAGL1Q9GZM7 467 aaPredicted RBP12.82□□□□□ -0.36
TOM1-207ENST00000439512 FXYD6Q9H0Q3 95 aa12.82□□□□□ -0.36
TOM1-207ENST00000439512 I3L521 148 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms