RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 A0A1B0GWB2 263 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 C8orf88P0DMB2 117 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 SFTPCP11686 197 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 ADIPOQQ15848 244 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 FAM131CQ96AQ9 280 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 SCNM1Q9BWG6 230 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 COA4Q9NYJ1 87 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 NCOR1O75376 2440 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 A0A1B0GTI1 187 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 ZNF883P0CG24 379 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 CKAP5Q14008 2032 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 BIVMQ86UB2 503 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 SPSB2Q99619 263 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 HSPB7Q9UBY9 170 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 LCTP09848 1927 aa12.85□□□□□ -0.35
TSC2-206ENST00000439117 DICER1Q9UPY3 1922 aaKnown RBP12.85□□□□□ -0.35
TSC2-206ENST00000439117 COLCA2A8K830 154 aa12.85□□□□□ -0.35
TSC2-206ENST00000439117 F8VVB4 439 aa12.85□□□□□ -0.35
TSC2-206ENST00000439117 F8VWA3 439 aa12.85□□□□□ -0.35
TSC2-206ENST00000439117 PPIHO43447 177 aaKnown RBP12.85□□□□□ -0.35
TSC2-206ENST00000439117 SCTP09683 121 aa12.85□□□□□ -0.35
TSC2-206ENST00000439117 CRYBB3P26998 211 aa12.85□□□□□ -0.35
TSC2-206ENST00000439117 INO80CQ6PI98 192 aaPredicted RBP12.85□□□□□ -0.35
TSC2-206ENST00000439117 F11RQ9Y624 299 aaKnown RBP12.85□□□□□ -0.35
TSC2-206ENST00000439117 CCDC88CQ9P219 2028 aa12.85□□□□□ -0.35
TSC2-206ENST00000439117 RAMP1O60894 148 aa12.85□□□□□ -0.35
TSC2-206ENST00000439117 IGLV3-21P80748 117 aaPredicted RBP12.85□□□□□ -0.35
TSC2-206ENST00000439117 TMEM177Q53S58 311 aa12.85□□□□□ -0.35
TSC2-206ENST00000439117 HEPN1Q6WQI6 88 aa12.85□□□□□ -0.35
TSC2-206ENST00000439117 C1QL4Q86Z23 238 aa12.85□□□□□ -0.35
TSC2-206ENST00000439117 C3orf80F5H4A9 247 aa12.85□□□□□ -0.35
TSC2-206ENST00000439117 UNC119Q13432 240 aa12.85□□□□□ -0.35
TSC2-206ENST00000439117 LINC01590Q5TEZ4 76 aa12.85□□□□□ -0.35
TSC2-206ENST00000439117 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.85□□□□□ -0.35
TSC2-206ENST00000439117 PGPA6NDG6 321 aa12.85□□□□□ -0.35
TSC2-206ENST00000439117 SLC25A17O43808 307 aa12.85□□□□□ -0.35
TSC2-206ENST00000439117 NUBP1P53384 320 aa12.85□□□□□ -0.35
TSC2-206ENST00000439117 TTC9CQ8N5M4 171 aa12.85□□□□□ -0.35
TSC2-206ENST00000439117 JKAMPQ9P055 326 aa12.85□□□□□ -0.35
TSC2-206ENST00000439117 RALGAPA2Q2PPJ7 1873 aa12.84□□□□□ -0.35
TSC2-206ENST00000439117 FHL5Q5TD97 284 aa12.84□□□□□ -0.35
TSC2-206ENST00000439117 C5orf30Q96GV9 206 aa12.84□□□□□ -0.35
TSC2-206ENST00000439117 PGLYRP4Q96LB8 373 aa12.84□□□□□ -0.35
TSC2-206ENST00000439117 HIST1H2BLQ99880 126 aa12.84□□□□□ -0.35
TSC2-206ENST00000439117 C2orf88Q9BSF0 95 aa12.84□□□□□ -0.35
TSC2-206ENST00000439117 RAB1BQ9H0U4 201 aa12.84□□□□□ -0.35
TSC2-206ENST00000439117 HEXA-AS1Q9H8Q6 139 aa12.84□□□□□ -0.35
TSC2-206ENST00000439117 OR4A8P0C604 315 aa12.84□□□□□ -0.35
TSC2-206ENST00000439117 ST6GALNAC3Q8NDV1 305 aa12.84□□□□□ -0.35
TSC2-206ENST00000439117 SLC17A3O00476 420 aa12.84□□□□□ -0.35
TSC2-206ENST00000439117 COX6A1P12074 109 aa12.84□□□□□ -0.35
TSC2-206ENST00000439117 RPS20P60866 119 aaKnown RBP12.84□□□□□ -0.35
TSC2-206ENST00000439117 HBBP68871 147 aa12.84□□□□□ -0.35
TSC2-206ENST00000439117 PRR7Q8TB68 274 aa12.84□□□□□ -0.35
TSC2-206ENST00000439117 MGPP08493 103 aa12.84□□□□□ -0.35
TSC2-206ENST00000439117 CSRP2Q16527 193 aa12.84□□□□□ -0.35
TSC2-206ENST00000439117 LDLRAD2Q5SZI1 272 aa12.84□□□□□ -0.35
TSC2-206ENST00000439117 CLDND2Q8NHS1 167 aa12.84□□□□□ -0.35
TSC2-206ENST00000439117 C16orf97H3BN30 126 aa12.83□□□□□ -0.36
TSC2-206ENST00000439117 GFRA3O60609 400 aa12.83□□□□□ -0.36
TSC2-206ENST00000439117 CLDN14O95500 239 aa12.83□□□□□ -0.36
TSC2-206ENST00000439117 NUDT11Q96G61 164 aa12.83□□□□□ -0.36
TSC2-206ENST00000439117 KCNS1Q96KK3 526 aa12.83□□□□□ -0.36
TSC2-206ENST00000439117 Q96M66 194 aa12.83□□□□□ -0.36
TSC2-206ENST00000439117 TINAGQ9UJW2 476 aa12.83□□□□□ -0.36
TSC2-206ENST00000439117 OTOFQ9HC10 1997 aa12.83□□□□□ -0.36
TSC2-206ENST00000439117 CEACAM18A8MTB9 384 aa12.83□□□□□ -0.36
TSC2-206ENST00000439117 AGFG2O95081 481 aa12.83□□□□□ -0.36
TSC2-206ENST00000439117 PCOLCEQ15113 449 aa12.83□□□□□ -0.36
TSC2-206ENST00000439117 CEACAM21Q3KPI0 293 aa12.83□□□□□ -0.36
TSC2-206ENST00000439117 C1QTNF9BB2RNN3 333 aa12.83□□□□□ -0.36
TSC2-206ENST00000439117 H7C2G1 150 aa12.83□□□□□ -0.36
TSC2-206ENST00000439117 RBFOX2O43251 390 aaKnown RBP eCLIP12.83□□□□□ -0.362e-7■■■■□ 26.2
TSC2-206ENST00000439117 TIAF1O95411 115 aa12.83□□□□□ -0.36
TSC2-206ENST00000439117 KHDC1LQ5JSQ8 128 aa12.83□□□□□ -0.36
TSC2-206ENST00000439117 ZNF324BQ6AW86 544 aaPredicted RBP12.83□□□□□ -0.36
TSC2-206ENST00000439117 HIST3H2BBQ8N257 126 aa12.83□□□□□ -0.36
TSC2-206ENST00000439117 ZNF645Q8N7E2 425 aa12.83□□□□□ -0.36
TSC2-206ENST00000439117 RAB1CQ92928 201 aa12.83□□□□□ -0.36
TSC2-206ENST00000439117 ZNF414Q96IQ9 312 aa12.83□□□□□ -0.36
TSC2-206ENST00000439117 OR11H12B2RN74 326 aa12.82□□□□□ -0.36
TSC2-206ENST00000439117 KRTCAP3Q53RY4 240 aa12.82□□□□□ -0.36
TSC2-206ENST00000439117 OR11H1Q8NG94 326 aa12.82□□□□□ -0.36
TSC2-206ENST00000439117 OR11H2Q8NH07 326 aa12.82□□□□□ -0.36
TSC2-206ENST00000439117 KCNK17Q96T54 332 aa12.82□□□□□ -0.36
TSC2-206ENST00000439117 CENPWQ5EE01 88 aa12.82□□□□□ -0.36
TSC2-206ENST00000439117 SLC25A40Q8TBP6 338 aa12.82□□□□□ -0.36
TSC2-206ENST00000439117 ONECUT1Q9UBC0 465 aa12.82□□□□□ -0.36
TSC2-206ENST00000439117 A0A0G2JMZ2 1700 aa12.82□□□□□ -0.36
TSC2-206ENST00000439117 LRRC37A2A6NM11 1700 aa12.82□□□□□ -0.36
TSC2-206ENST00000439117 SH2D7A6NKC9 451 aaPredicted RBP12.82□□□□□ -0.36
TSC2-206ENST00000439117 GCHFRP30047 84 aa12.82□□□□□ -0.36
TSC2-206ENST00000439117 RPL31P62899 125 aaKnown RBP12.82□□□□□ -0.36
TSC2-206ENST00000439117 NRN1Q9NPD7 142 aa12.82□□□□□ -0.36
TSC2-206ENST00000439117 ICE1Q9Y2F5 2266 aa12.82□□□□□ -0.36
TSC2-206ENST00000439117 ZNF324O75467 553 aaPredicted RBP12.82□□□□□ -0.36
TSC2-206ENST00000439117 IL11P20809 199 aa12.82□□□□□ -0.36
TSC2-206ENST00000439117 SIGMAR1Q99720 223 aa12.82□□□□□ -0.36
TSC2-206ENST00000439117 A0A1W2PRS3 328 aa12.81□□□□□ -0.36
TSC2-206ENST00000439117 IGKV3-11P04433 115 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms