RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 PARP11Q9NR21 331 aa2.7□□□□□ -1.98
HMGB1P12-201ENST00000438594 CYSLTR1Q9Y271 337 aa2.7□□□□□ -1.98
HMGB1P12-201ENST00000438594 POLR1AO95602 1720 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P12-201ENST00000438594 CDC42BPAQ5VT25 1732 aa2.7□□□□□ -1.98
HMGB1P12-201ENST00000438594 TTC37Q6PGP7 1564 aa2.7□□□□□ -1.98
HMGB1P12-201ENST00000438594 MAST1Q9Y2H9 1570 aa2.7□□□□□ -1.98
HMGB1P12-201ENST00000438594 ADGBQ8N7X0 1667 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 ITSN2Q9NZM3 1697 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 MYOM3Q5VTT5 1437 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 ARAP3Q8WWN8 1544 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 MYH10P35580 1976 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 PREX2Q70Z35 1606 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 RAPGEF6Q8TEU7 1601 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 IGHV4-30-2A0A087WSY4 118 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 TRAV38-1A0A0B4J264 116 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 LOC100130705A0A1B0GUX0 176 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 CLDN25C9JDP6 229 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 PRAC2D3DTV9 90 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 M0R1X1 148 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 CCL25O15444 150 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 PGLYRP1O75594 196 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 FSTL3O95633 263 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 OPN1SWP03999 348 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 HLA-DQB2P05538 268 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 SMIM17P0DL12 118 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 LPAR6P43657 344 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 LINC00313P59037 77 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 PPP1CAP62136 330 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 RPL23P62829 140 aaKnown RBP2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 HBA1P69905 142 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 EGFEM1PQ0D2K5 195 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 ADIGQ0VDE8 80 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 FABP9Q0Z7S8 132 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 DHRS2Q13268 280 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 CST6Q15828 149 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 ZNF239Q16600 458 aaKnown RBP2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 GUCA2BQ16661 112 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 KRTAP24-1Q3LI83 254 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 SCGB2B2Q4G0G5 96 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 UBE2NLQ5JXB2 153 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 NCMAPQ5T1S8 102 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 WDR59Q6PJI9 974 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 ZNF773Q6PK81 442 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 TCTE3Q8IZS6 198 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 C8orf59Q8N0T1 100 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 OR8I2Q8N0Y5 310 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 C4orf33Q8N1A6 199 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 DRAM1Q8N682 238 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 TMEM252Q8N6L7 170 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 NUP37Q8NFH4 326 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 OR51T1Q8NGJ9 327 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 OR52P1PQ8NH57 321 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 TERB2Q8NHR7 220 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 LMX1AQ8TE12 382 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 ZNF418Q8TF45 676 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 ERMAPQ96PL5 475 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 NMNAT3Q96T66 252 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 ANAPC13Q9BS18 74 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 PRADC1Q9BSG0 188 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 ZBP1Q9H171 429 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 CXorf21Q9HAI6 301 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 DPM3Q9P2X0 92 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 RPUSD1Q9UJJ7 312 aaKnown RBP2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 FIS1Q9Y3D6 152 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 AMMECR1Q9Y4X0 333 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 VIRMAQ69YN4 1812 aaKnown RBP2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 NCOA2Q15596 1464 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 ABCC10Q5T3U5 1492 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 TEX14Q8IWB6 1497 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 ARHGEF5Q12774 1597 aa2.69□□□□□ -1.98
HMGB1P12-201ENST00000438594 OVOS2A0A0G2JMS6 1433 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 TECPR2O15040 1411 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 CHD2O14647 1828 aaKnown RBP2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 LRRK1Q38SD2 2015 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 LOC102724200A0A096LPH7 203 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 TRAV5A0A0B4J249 113 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 LOC107984640A0A0U1RRK4 108 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 A0A1B0GUV1 79 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 TMEM269A0A1B0GVZ9 245 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 DHRS12A0PJE2 317 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 CD300LBA8K4G0 201 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 MPTX1A8MV57 137 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 SMIM1B2RUZ4 78 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 M0R381 172 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 LGALS9O00182 355 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 PIRO00625 290 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 TNFSF13O75888 250 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 APOMO95445 188 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 FABP3P05413 133 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 CHTF8P0CG12 524 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 PPIBP23284 216 aaKnown RBP2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 IL3RAP26951 378 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 CCR2P41597 374 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 UBE2NP61088 152 aaKnown RBP2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 RPS11P62280 158 aaKnown RBP eCLIP2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 KIAA0040Q15053 153 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 PRR4Q16378 134 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 LINC00303Q3SY05 128 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 LDLRAD2Q5SZI1 272 aa2.68□□□□□ -1.98
HMGB1P12-201ENST00000438594 C9orf66Q5T8R8 295 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms