RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 LGALS3P17931 250 aaKnown RBP1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 MED21Q13503 144 aa1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 LRRC26Q2I0M4 334 aa1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 ARHGAP31Q2M1Z3 1444 aa1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 SPATA31B1PQ5VZV4 182 aa1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 CDC42BPGQ6DT37 1551 aa1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 SCGB1D4Q6XE38 83 aa1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 OR5C1Q8NGR4 320 aa1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 SMIM19Q96E16 107 aa1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 ARL5BQ96KC2 179 aa1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 NSRP1Q9H0G5 558 aaKnown RBP1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 MS4A6AQ9H2W1 248 aa1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 PIEZO2Q9H5I5 2752 aa1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 SPANXB1Q9NS25 103 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 DNAJC12Q9UKB3 198 aa1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 VPREB3Q9UKI3 123 aa1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 FIS1Q9Y3D6 152 aa1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 SNX10Q9Y5X0 201 aa1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 AKAP11Q9UKA4 1901 aa1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 RIF1Q5UIP0 2472 aaKnown RBP1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 CCDC88AQ3V6T2 1871 aa1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 TRPM7Q96QT4 1865 aa1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 C2CD3Q4AC94 2353 aa1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 CEP250Q9BV73 2442 aa1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 CASKIN1Q8WXD9 1431 aa1.67□□□□□ -2.14
TRAPPC13-204ENST00000438419 F5H768 121 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 H3BSA7 217 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 AZIN1O14977 448 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 BIRC5O15392 142 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 HBZP02008 142 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 OR13C7P0DN81 318 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 CDC34P49427 236 aaPredicted RBP1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 GZMMP51124 257 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 TNFRSF9Q07011 255 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 MESTQ5EB52 335 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 NATD1Q8N6N6 113 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 CD200R1Q8TD46 325 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 CYGBQ8WWM9 190 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 MROQ9BYG7 248 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 SLC22A4Q9H015 551 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 LRRC19Q9H756 370 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 UBQLN4Q9NRR5 601 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 SPTAN1Q13813 2472 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 PRXQ9BXM0 1461 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 MBD5Q9P267 1494 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 CNOT1A5YKK6 2376 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 SPTBN2O15020 2390 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 COL4A5P29400 1685 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 GVINP1Q7Z2Y8 2422 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 TENM4Q6N022 2769 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 LOC102725191A0A1B0GVB3 256 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 G3V3Q6 166 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 C3orf84H3BNL1 204 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 STK16O75716 305 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 CRTAPO75718 401 aaPredicted RBP1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 LINC00614P0C842 121 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 COX5BP10606 129 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 IFNGR2P38484 337 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 AKR1C2P52895 323 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 H2BFSP57053 126 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 DAD1P61803 113 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 SLC35A2P78381 396 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 CDKL4Q5MAI5 379 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 SMARCD3Q6STE5 483 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 Q6ZRU5 148 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 FAM19A5Q7Z5A7 132 aaPredicted RBP1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 TMEM156Q8N614 296 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 ZFAND2AQ8N6M9 145 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 OR10P1Q8NGE3 313 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 OR8K1Q8NGG5 319 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 OR2V1Q8NHB1 315 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 ERMNQ8TAM6 284 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 SLC37A2Q8TED4 501 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 ACY3Q96HD9 319 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 ABHD14BQ96IU4 210 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 KCTD7Q96MP8 289 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 MED28Q9H204 178 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 PARVAQ9NVD7 372 aa1.66□□□□□ -2.14
TRAPPC13-204ENST00000438419 CRYBG1Q9Y4K1 1723 aa1.65□□□□□ -2.14
TRAPPC13-204ENST00000438419 KALRNO60229 2985 aa1.65□□□□□ -2.14
TRAPPC13-204ENST00000438419 FAM186AA6NE01 2351 aa1.65□□□□□ -2.14
TRAPPC13-204ENST00000438419 SPEGQ15772 3267 aa1.65□□□□□ -2.15
TRAPPC13-204ENST00000438419 WNK3Q9BYP7 1800 aa1.65□□□□□ -2.15
TRAPPC13-204ENST00000438419 ATG2BQ96BY7 2078 aa1.65□□□□□ -2.15
TRAPPC13-204ENST00000438419 NAIPQ13075 1403 aa1.65□□□□□ -2.15
TRAPPC13-204ENST00000438419 UBR5O95071 2799 aaPredicted RBP1.65□□□□□ -2.15
TRAPPC13-204ENST00000438419 CCDC141Q6ZP82 1450 aa1.65□□□□□ -2.15
TRAPPC13-204ENST00000438419 ZNF73O43830 326 aaPredicted RBP1.65□□□□□ -2.15
TRAPPC13-204ENST00000438419 NIPSNAP2O75323 286 aa1.65□□□□□ -2.15
TRAPPC13-204ENST00000438419 DEXIO95424 95 aa1.65□□□□□ -2.15
TRAPPC13-204ENST00000438419 OCM2P0CE71 109 aa1.65□□□□□ -2.15
TRAPPC13-204ENST00000438419 CBR1P16152 277 aa1.65□□□□□ -2.15
TRAPPC13-204ENST00000438419 CD79BP40259 229 aa1.65□□□□□ -2.15
TRAPPC13-204ENST00000438419 MAGEA2P43356 314 aa1.65□□□□□ -2.15
TRAPPC13-204ENST00000438419 BLVRAP53004 296 aa1.65□□□□□ -2.15
TRAPPC13-204ENST00000438419 PSG4Q00888 419 aa1.65□□□□□ -2.15
TRAPPC13-204ENST00000438419 MGAT3Q09327 533 aa1.65□□□□□ -2.15
TRAPPC13-204ENST00000438419 SLC36A2Q495M3 483 aa1.65□□□□□ -2.15
TRAPPC13-204ENST00000438419 ATP5L2Q7Z4Y8 100 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms