RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 ATP5G2Q06055 141 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 PJVKQ0ZLH3 352 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 MLLT11Q13015 90 aaPredicted RBP5.93□□□□□ -1.46
VPS50-204ENST00000438395 EXOSC2Q13868 293 aaKnown RBP5.93□□□□□ -1.46
VPS50-204ENST00000438395 KLF5Q13887 457 aaPredicted RBP5.93□□□□□ -1.46
VPS50-204ENST00000438395 ARL6IP1Q15041 203 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 IGSF11Q5DX21 431 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 FAM209BQ5JX69 171 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 HES5Q5TA89 166 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 FAM223AQ8IWN6 122 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 CABLES2Q9BTV7 478 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 SDHAF2Q9NX18 166 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 SLC2A8Q9NY64 477 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 BLOC1S6Q9UL45 172 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 PRELID3BQ9Y3B1 194 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 RYR2Q92736 4967 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 TRBV6-7A0A0A0MS04 114 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 TMEM272A0A1B0GTI8 110 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 MSGN1A6NI15 193 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 A8MZ25 164 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 IGLV2-23P01705 113 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 HIST1H1DP16402 221 aaKnown RBP5.92□□□□□ -1.46
VPS50-204ENST00000438395 PI3P19957 117 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 MAP2K4P45985 399 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 TMEM50BP56557 158 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 CD81P60033 236 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 IRF3Q14653 427 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 PRSS8Q16651 343 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 GUCA2BQ16661 112 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 HAGHQ16775 308 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 C2orf76Q3KRA6 126 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 TMEM177Q53S58 311 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 PLAC9Q5JTB6 97 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 ZNF343Q6P1L6 599 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 TMEM91Q6ZNR0 172 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 KCTD9Q7L273 389 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 SLC25A42Q86VD7 318 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 Q8N1Y9 231 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 TEX45Q8NA69 505 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 OR2K2Q8NGT1 345 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 OR10R2Q8NGX6 335 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 OSR1Q8TAX0 266 aaPredicted RBP5.92□□□□□ -1.46
VPS50-204ENST00000438395 SRSF12Q8WXF0 261 aaKnown RBP5.92□□□□□ -1.46
VPS50-204ENST00000438395 MAFIPQ8WZ33 124 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 MGLLQ99685 303 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 VCX3BQ9H321 246 aa5.92□□□□□ -1.46
VPS50-204ENST00000438395 IFITM5A6NNB3 132 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 FOXI3A8MTJ6 420 aaPredicted RBP5.91□□□□□ -1.46
VPS50-204ENST00000438395 PROP1O75360 226 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 SLC22A5O76082 557 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 BRI3O95415 125 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 DHFRP00374 187 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 TRBV12-3P01733 135 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 GSTT2P0CG29 244 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 GSTT2BP0CG30 244 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 CD37P11049 281 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 GNB3P16520 340 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 HSPA13P48723 471 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 AQP4P55087 323 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 FABP5Q01469 135 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 DYRK1AQ13627 763 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 IDO2Q6ZQW0 420 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 ZNF367Q7RTV3 350 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 PRSS48Q7RTY5 328 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 LAX1Q8IWV1 398 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 MMD2Q8IY49 270 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 NECAP1Q8NC96 275 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 ADAD2Q8NCV1 583 aaKnown RBP5.91□□□□□ -1.46
VPS50-204ENST00000438395 GFI1Q99684 422 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 ATG5Q9H1Y0 275 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 PLEKHA3Q9HB20 300 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 AKIP1Q9NQ31 210 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 SIGLEC8Q9NYZ4 499 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 ZNF230Q9UIE0 474 aaPredicted RBP5.91□□□□□ -1.46
VPS50-204ENST00000438395 CEPT1Q9Y6K0 416 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 TNCP24821 2201 aa5.91□□□□□ -1.46
VPS50-204ENST00000438395 TRAV1-2A0A0B4J238 106 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 J3QRK9 145 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 MFNGO00587 321 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 FCGR3BO75015 233 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 SCGNO76038 276 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 PRH1P02810 166 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 CRYGBP07316 175 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 CSN3P07498 182 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 CTXN2P0C2S0 81 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 SAA1P0DJI8 122 aaPredicted RBP5.9□□□□□ -1.46
VPS50-204ENST00000438395 RAB3BP20337 219 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 DTYMKP23919 212 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 DUTP33316 252 aaKnown RBP5.9□□□□□ -1.46
VPS50-204ENST00000438395 CDK10Q15131 360 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 TBCEQ15813 527 aaPredicted RBP5.9□□□□□ -1.46
VPS50-204ENST00000438395 C15orf32Q32M92 178 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 OR2B11Q5JQS5 317 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 ADAMTSL5Q6ZMM2 481 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 SLC16A13Q7RTY0 426 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 H1FOOQ8IZA3 346 aaPredicted RBP5.9□□□□□ -1.46
VPS50-204ENST00000438395 ZNF645Q8N7E2 425 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 OR4S2Q8NH73 311 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 VSTM2AQ8TAG5 236 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 TCTEX1D2Q8WW35 142 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms