RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 ASPHD1Q5U4P2 390 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 PDPNQ86YL7 162 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 MINDY2Q8NBR6 621 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 SNAPC3Q92966 411 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 CLCC1Q96S66 551 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 GINS4Q9BRT9 223 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 FAM103A1Q9BTL3 118 aaKnown RBP6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 FUNDC2Q9BWH2 189 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 AUNIPQ9H7T9 357 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 ZFP57Q9NU63 452 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 AURKAIP1Q9NWT8 199 aaPredicted RBP6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 KIAA1456Q9P272 454 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 METTL1Q9UBP6 276 aaKnown RBP6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 SPATA2Q9UM82 520 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 NUBP2Q9Y5Y2 271 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 CCL24O00175 119 aa6.63□□□□□ -1.35
HERPUD2-206ENST00000438224 SCGNO76038 276 aa6.63□□□□□ -1.35
HERPUD2-206ENST00000438224 CA2P00918 260 aa6.63□□□□□ -1.35
HERPUD2-206ENST00000438224 APOA2P02652 100 aa6.63□□□□□ -1.35
HERPUD2-206ENST00000438224 HOXD3P31249 432 aaPredicted RBP6.63□□□□□ -1.35
HERPUD2-206ENST00000438224 DUTP33316 252 aaKnown RBP6.63□□□□□ -1.35
HERPUD2-206ENST00000438224 MYCNOSP40205 109 aa6.63□□□□□ -1.35
HERPUD2-206ENST00000438224 VBP1P61758 197 aa6.63□□□□□ -1.35
HERPUD2-206ENST00000438224 GNB1P62873 340 aa6.63□□□□□ -1.35
HERPUD2-206ENST00000438224 EIF4EBP1Q13541 118 aaPredicted RBP6.63□□□□□ -1.35
HERPUD2-206ENST00000438224 ARL6IP1Q15041 203 aa6.63□□□□□ -1.35
HERPUD2-206ENST00000438224 TIMM50Q3ZCQ8 353 aa6.63□□□□□ -1.35
HERPUD2-206ENST00000438224 XP32Q5T750 250 aa6.63□□□□□ -1.35
HERPUD2-206ENST00000438224 ZNF660Q6AZW8 331 aaPredicted RBP6.63□□□□□ -1.35
HERPUD2-206ENST00000438224 CNIH2Q6PI25 160 aa6.63□□□□□ -1.35
HERPUD2-206ENST00000438224 ZNF491Q8N8L2 437 aa6.63□□□□□ -1.35
HERPUD2-206ENST00000438224 OR13F1Q8NGS4 319 aa6.63□□□□□ -1.35
HERPUD2-206ENST00000438224 GPHA2Q96T91 129 aa6.63□□□□□ -1.35
HERPUD2-206ENST00000438224 DCSTAMPQ9H295 470 aa6.63□□□□□ -1.35
HERPUD2-206ENST00000438224 ANXA10Q9UJ72 324 aa6.63□□□□□ -1.35
HERPUD2-206ENST00000438224 OR2W1Q9Y3N9 320 aa6.63□□□□□ -1.35
HERPUD2-206ENST00000438224 A3GALT2U3KPV4 340 aa6.63□□□□□ -1.35
HERPUD2-206ENST00000438224 A0A1W2PN81 502 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 MEIS3P1A6NDR6 274 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 I3L521 148 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 K7EIL1 84 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 SPDEFO95238 335 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 CRYZL1O95825 349 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 HLA-DQB1P01920 261 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 EIF4EP06730 217 aaKnown RBP6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 OR5H8P0DN80 308 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 CHRNA7P36544 502 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 BRWD1-AS2P59051 145 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 PITPNAQ00169 270 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 FHL3Q13643 280 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 PLGLAQ15195 96 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 PPP1R27Q86WC6 154 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 HOGA1Q86XE5 327 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 SAMD12Q8N8I0 201 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 LFNGQ8NES3 379 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 BEST4Q8NFU0 473 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 C4orf3Q8WVX3 66 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 FLYWCH2Q96CP2 140 aaKnown RBP6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 HARBI1Q96MB7 349 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 OR5B12Q96R08 314 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 TSNAXQ99598 290 aaKnown RBP6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 RNF5Q99942 180 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 GON7Q9BXV9 100 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 ALX4Q9H161 411 aaPredicted RBP6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 VCX3AQ9NNX9 186 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 NECAP2Q9NVZ3 263 aa6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 FOXA2Q9Y261 457 aaPredicted RBP6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 RBM7Q9Y580 266 aaKnown RBP6.62□□□□□ -1.35
HERPUD2-206ENST00000438224 A0A0A6YYH2 397 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 WI2-2373I1.2A0A1W2PRP0 233 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 GAGE10A6NGK3 116 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 A6NJ64 397 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 XRCC3O43542 346 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 AADACP22760 399 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 SLC6A1P30531 599 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 RAB9AP51151 201 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 LUMP51884 338 aaPredicted RBP6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 TAS2R20P59543 309 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 RUNX1Q01196 453 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 DEFA5Q01523 94 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 EGFEM1PQ0D2K5 195 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 FXYD3Q14802 87 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 CTF1Q16619 201 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 OR2B11Q5JQS5 317 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 UBE2NLQ5JXB2 153 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 UNQ5815/PRO19632Q6UWF5 114 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 ZNF562Q6V9R5 426 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 IDO2Q6ZQW0 420 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 ZNF645Q8N7E2 425 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 NUDT10Q8NFP7 164 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 GRPEL2Q8TAA5 225 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 ARPC1AQ92747 370 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 SLC25A46Q96AG3 418 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 NUDT11Q96G61 164 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 UBE2E2Q96LR5 201 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 ANAPC10Q9UM13 185 aa6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 RBMX2Q9Y388 322 aaKnown RBP6.61□□□□□ -1.35
HERPUD2-206ENST00000438224 FCGR3BO75015 233 aa6.6□□□□□ -1.35
HERPUD2-206ENST00000438224 RBMXL2O75526 392 aaKnown RBP6.6□□□□□ -1.35
HERPUD2-206ENST00000438224 GABARAPO95166 117 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms