RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 PDLIM3Q53GG5 364 aaPredicted RBP13.86□□□□□ -0.19
NCSTN-208ENST00000438008 SNX29P2Q8IUI4 249 aa13.86□□□□□ -0.19
NCSTN-208ENST00000438008 GRPEL2Q8TAA5 225 aa13.86□□□□□ -0.19
NCSTN-208ENST00000438008 DCUN1D5Q9BTE7 237 aa13.86□□□□□ -0.19
NCSTN-208ENST00000438008 NOTCH3Q9UM47 2321 aa13.86□□□□□ -0.19
NCSTN-208ENST00000438008 I3L521 148 aa13.85□□□□□ -0.19
NCSTN-208ENST00000438008 SAA1P0DJI8 122 aaPredicted RBP13.85□□□□□ -0.19
NCSTN-208ENST00000438008 FXYD4P59646 89 aa13.85□□□□□ -0.19
NCSTN-208ENST00000438008 HERV-K104P61576 105 aa13.85□□□□□ -0.19
NCSTN-208ENST00000438008 GNB1P62873 340 aa13.85□□□□□ -0.19
NCSTN-208ENST00000438008 DEFB136Q30KP8 78 aa13.85□□□□□ -0.19
NCSTN-208ENST00000438008 OR2B11Q5JQS5 317 aa13.85□□□□□ -0.19
NCSTN-208ENST00000438008 BORCS5Q969J3 196 aa13.85□□□□□ -0.19
NCSTN-208ENST00000438008 MOB3AQ96BX8 217 aa13.85□□□□□ -0.19
NCSTN-208ENST00000438008 DUX3Q96PT4 197 aa13.85□□□□□ -0.19
NCSTN-208ENST00000438008 ZNF2Q9BSG1 426 aaPredicted RBP13.85□□□□□ -0.19
NCSTN-208ENST00000438008 GNB4Q9HAV0 340 aa13.85□□□□□ -0.19
NCSTN-208ENST00000438008 RBFOX2O43251 390 aaKnown RBP eCLIP13.84□□□□□ -0.19
NCSTN-208ENST00000438008 TNFSF12O43508 249 aa13.84□□□□□ -0.19
NCSTN-208ENST00000438008 CREBL2O60519 120 aaPredicted RBP13.84□□□□□ -0.19
NCSTN-208ENST00000438008 HLA-DMAP28067 261 aa13.84□□□□□ -0.19
NCSTN-208ENST00000438008 CD40LGP29965 261 aa13.84□□□□□ -0.19
NCSTN-208ENST00000438008 GNRHRP30968 328 aa13.84□□□□□ -0.19
NCSTN-208ENST00000438008 RCVRNP35243 200 aa13.84□□□□□ -0.19
NCSTN-208ENST00000438008 HRH1P35367 487 aa13.84□□□□□ -0.19
NCSTN-208ENST00000438008 FHL3Q13643 280 aa13.84□□□□□ -0.19
NCSTN-208ENST00000438008 IDO2Q6ZQW0 420 aa13.84□□□□□ -0.19
NCSTN-208ENST00000438008 ZNF818PQ6ZRF7 136 aa13.84□□□□□ -0.19
NCSTN-208ENST00000438008 OR6F1Q8NGZ6 308 aa13.84□□□□□ -0.19
NCSTN-208ENST00000438008 C15orf40Q8WUR7 153 aa13.84□□□□□ -0.19
NCSTN-208ENST00000438008 GPHA2Q96T91 129 aa13.84□□□□□ -0.19
NCSTN-208ENST00000438008 MCRIP2Q9BUT9 160 aaKnown RBP13.84□□□□□ -0.19
NCSTN-208ENST00000438008 GPR61Q9BZJ8 451 aa13.84□□□□□ -0.19
NCSTN-208ENST00000438008 SLA2Q9H6Q3 261 aa13.84□□□□□ -0.19
NCSTN-208ENST00000438008 EXTL2Q9UBQ6 330 aa13.84□□□□□ -0.19
NCSTN-208ENST00000438008 H3BUA1 57 aa13.83□□□□□ -0.2
NCSTN-208ENST00000438008 BRI3O95415 125 aa13.83□□□□□ -0.2
NCSTN-208ENST00000438008 CATR1Q13166 79 aa13.83□□□□□ -0.2
NCSTN-208ENST00000438008 ASPHD1Q5U4P2 390 aa13.83□□□□□ -0.2
NCSTN-208ENST00000438008 TMEM17Q86X19 198 aa13.83□□□□□ -0.2
NCSTN-208ENST00000438008 MMD2Q8IY49 270 aa13.83□□□□□ -0.2
NCSTN-208ENST00000438008 VSTM2AQ8TAG5 236 aa13.83□□□□□ -0.2
NCSTN-208ENST00000438008 DYNC2LI1Q8TCX1 351 aa13.83□□□□□ -0.2
NCSTN-208ENST00000438008 MIXL1Q9H2W2 232 aa13.83□□□□□ -0.2
NCSTN-208ENST00000438008 ZNF430Q9H8G1 570 aaPredicted RBP13.83□□□□□ -0.2
NCSTN-208ENST00000438008 CCDC59Q9P031 241 aaKnown RBP13.83□□□□□ -0.2
NCSTN-208ENST00000438008 OR2A4O95047 310 aa13.82□□□□□ -0.2
NCSTN-208ENST00000438008 HRASP01112 189 aa13.82□□□□□ -0.2
NCSTN-208ENST00000438008 TNXAQ16473 311 aa13.82□□□□□ -0.2
NCSTN-208ENST00000438008 FOXB2Q5VYV0 432 aa13.82□□□□□ -0.2
NCSTN-208ENST00000438008 REC114Q7Z4M0 266 aa13.82□□□□□ -0.2
NCSTN-208ENST00000438008 SPAG16Q8N0X2 631 aa13.82□□□□□ -0.2
NCSTN-208ENST00000438008 PUSL1Q8N0Z8 303 aaKnown RBP13.82□□□□□ -0.2
NCSTN-208ENST00000438008 POC5Q8NA72 575 aa13.82□□□□□ -0.2
NCSTN-208ENST00000438008 OR11H1Q8NG94 326 aa13.82□□□□□ -0.2
NCSTN-208ENST00000438008 CASTOR1Q8WTX7 329 aa13.82□□□□□ -0.2
NCSTN-208ENST00000438008 OR2A7Q96R45 310 aa13.82□□□□□ -0.2
NCSTN-208ENST00000438008 ABHD1Q96SE0 405 aa13.82□□□□□ -0.2
NCSTN-208ENST00000438008 DNAH3Q8TD57 4116 aa13.82□□□□□ -0.2
NCSTN-208ENST00000438008 MSGN1A6NI15 193 aa13.81□□□□□ -0.2
NCSTN-208ENST00000438008 CTDSP2O14595 271 aa13.81□□□□□ -0.2
NCSTN-208ENST00000438008 RAMP3O60896 148 aa13.81□□□□□ -0.2
NCSTN-208ENST00000438008 VAX1Q5SQQ9 334 aa13.81□□□□□ -0.2
NCSTN-208ENST00000438008 VKORC1L1Q8N0U8 176 aa13.81□□□□□ -0.2
NCSTN-208ENST00000438008 OR5T1Q8NG75 326 aa13.81□□□□□ -0.2
NCSTN-208ENST00000438008 OR1N2Q8NGR9 330 aa13.81□□□□□ -0.2
NCSTN-208ENST00000438008 TMEM167AQ8TBQ9 72 aa13.81□□□□□ -0.2
NCSTN-208ENST00000438008 CD300LFQ8TDQ1 290 aa13.81□□□□□ -0.2
NCSTN-208ENST00000438008 SRSF12Q8WXF0 261 aaKnown RBP13.81□□□□□ -0.2
NCSTN-208ENST00000438008 ISOC1Q96CN7 298 aa13.81□□□□□ -0.2
NCSTN-208ENST00000438008 RHOVQ96L33 236 aa13.81□□□□□ -0.2
NCSTN-208ENST00000438008 AIFM2Q9BRQ8 373 aa13.81□□□□□ -0.2
NCSTN-208ENST00000438008 SCOCQ9UIL1 159 aa13.81□□□□□ -0.2
NCSTN-208ENST00000438008 H3BMQ9 156 aa13.8□□□□□ -0.2
NCSTN-208ENST00000438008 RGS5O15539 181 aa13.8□□□□□ -0.2
NCSTN-208ENST00000438008 NOL3O60936 208 aaKnown RBP13.8□□□□□ -0.2
NCSTN-208ENST00000438008 PGLYRP1O75594 196 aaPredicted RBP13.8□□□□□ -0.2
NCSTN-208ENST00000438008 ACTL6BO94805 426 aa13.8□□□□□ -0.2
NCSTN-208ENST00000438008 KBTBD11O94819 623 aa13.8□□□□□ -0.2
NCSTN-208ENST00000438008 HPRT1P00492 218 aa13.8□□□□□ -0.2
NCSTN-208ENST00000438008 LGALS1P09382 135 aaKnown RBP13.8□□□□□ -0.2
NCSTN-208ENST00000438008 OR8U8P0C7N1 319 aa13.8□□□□□ -0.2
NCSTN-208ENST00000438008 TPPP2P59282 170 aa13.8□□□□□ -0.2
NCSTN-208ENST00000438008 TSPAN5P62079 268 aa13.8□□□□□ -0.2
NCSTN-208ENST00000438008 ZNF616Q08AN1 781 aa13.8□□□□□ -0.2
NCSTN-208ENST00000438008 POU2AF1Q16633 256 aa13.8□□□□□ -0.2
NCSTN-208ENST00000438008 LAX1Q8IWV1 398 aa13.8□□□□□ -0.2
NCSTN-208ENST00000438008 OR52I2Q8NH67 350 aa13.8□□□□□ -0.2
NCSTN-208ENST00000438008 MS4A10Q96PG2 267 aa13.8□□□□□ -0.2
NCSTN-208ENST00000438008 OR5B12Q96R08 314 aa13.8□□□□□ -0.2
NCSTN-208ENST00000438008 FXYD6Q9H0Q3 95 aa13.8□□□□□ -0.2
NCSTN-208ENST00000438008 KLK11Q9UBX7 282 aa13.8□□□□□ -0.2
NCSTN-208ENST00000438008 MTFP1Q9UDX5 166 aa13.8□□□□□ -0.2
NCSTN-208ENST00000438008 TRGV3P03979 118 aa13.79□□□□□ -0.2
NCSTN-208ENST00000438008 MAS1LP35410 378 aa13.79□□□□□ -0.2
NCSTN-208ENST00000438008 RAB25P57735 213 aa13.79□□□□□ -0.2
NCSTN-208ENST00000438008 TAS2R31P59538 309 aa13.79□□□□□ -0.2
NCSTN-208ENST00000438008 EGFEM1PQ0D2K5 195 aa13.79□□□□□ -0.2
NCSTN-208ENST00000438008 AADACL3Q5VUY0 350 aa13.79□□□□□ -0.2
NCSTN-208ENST00000438008 LPCAT3Q6P1A2 487 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms