RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 LYPD2Q6UXB3 125 aa21.1■□□□□ 0.97
CPNE1-216ENST00000437340 OR4A16Q8NH70 328 aa21.1■□□□□ 0.97
CPNE1-216ENST00000437340 QTRT1Q9BXR0 403 aaKnown RBP21.1■□□□□ 0.97
CPNE1-216ENST00000437340 ARFGEF3Q5TH69 2177 aa21.1■□□□□ 0.97
CPNE1-216ENST00000437340 ANKHD1Q8IWZ3 2542 aaKnown RBP21.1■□□□□ 0.97
CPNE1-216ENST00000437340 A0A1B0GW64 132 aa21.09■□□□□ 0.97
CPNE1-216ENST00000437340 FAM157AC9JC47 383 aa21.09■□□□□ 0.97
CPNE1-216ENST00000437340 ATRAIDQ6UW56 229 aa21.09■□□□□ 0.97
CPNE1-216ENST00000437340 ZNF383Q8NA42 475 aa21.09■□□□□ 0.97
CPNE1-216ENST00000437340 ZDHHC16Q969W1 377 aa21.09■□□□□ 0.97
CPNE1-216ENST00000437340 PINX1Q96BK5 328 aaKnown RBP21.09■□□□□ 0.97
CPNE1-216ENST00000437340 PBDC1Q9BVG4 233 aa21.09■□□□□ 0.97
CPNE1-216ENST00000437340 DVL1O14640 695 aa21.08■□□□□ 0.97
CPNE1-216ENST00000437340 GUK1Q16774 197 aa21.08■□□□□ 0.97
CPNE1-216ENST00000437340 ZNF429Q86V71 674 aa21.08■□□□□ 0.97
CPNE1-216ENST00000437340 SCRT1Q9BWW7 348 aa21.08■□□□□ 0.97
CPNE1-216ENST00000437340 NKX6-2Q9C056 277 aaPredicted RBP21.08■□□□□ 0.97
CPNE1-216ENST00000437340 WDR61Q9GZS3 305 aaKnown RBP21.08■□□□□ 0.97
CPNE1-216ENST00000437340 TMEM140Q9NV12 185 aa21.08■□□□□ 0.97
CPNE1-216ENST00000437340 CTSZQ9UBR2 303 aa21.08■□□□□ 0.97
CPNE1-216ENST00000437340 TMA7Q9Y2S6 64 aaKnown RBP21.08■□□□□ 0.97
CPNE1-216ENST00000437340 PMS2P5A8MQ11 134 aa21.08■□□□□ 0.96
CPNE1-216ENST00000437340 H2AFB1P0C5Y9 115 aa21.08■□□□□ 0.96
CPNE1-216ENST00000437340 SFTA3P0C7M3 94 aa21.08■□□□□ 0.96
CPNE1-216ENST00000437340 PPOXP50336 477 aa21.08■□□□□ 0.96
CPNE1-216ENST00000437340 SERF2P84101 59 aa21.08■□□□□ 0.96
CPNE1-216ENST00000437340 RELBQ01201 579 aa21.08■□□□□ 0.96
CPNE1-216ENST00000437340 TLE4Q04727 773 aa21.08■□□□□ 0.96
CPNE1-216ENST00000437340 TFF3Q07654 80 aa21.08■□□□□ 0.96
CPNE1-216ENST00000437340 SSX9Q7RTT3 188 aa21.08■□□□□ 0.96
CPNE1-216ENST00000437340 IFNA17P01571 189 aa21.07■□□□□ 0.96
CPNE1-216ENST00000437340 POU2AF1Q16633 256 aa21.07■□□□□ 0.96
CPNE1-216ENST00000437340 OR8G2PQ6IF36 304 aa21.07■□□□□ 0.96
CPNE1-216ENST00000437340 C8orf31Q8N9H6 132 aa21.07■□□□□ 0.96
CPNE1-216ENST00000437340 OR10P1Q8NGE3 313 aa21.07■□□□□ 0.96
CPNE1-216ENST00000437340 H1FXQ92522 213 aaKnown RBP21.07■□□□□ 0.96
CPNE1-216ENST00000437340 FBXO7Q9Y3I1 522 aa21.07■□□□□ 0.96
CPNE1-216ENST00000437340 GNB2P62879 340 aa21.06■□□□□ 0.96
CPNE1-216ENST00000437340 SP5Q6BEB4 398 aaPredicted RBP21.06■□□□□ 0.96
CPNE1-216ENST00000437340 ZNF843Q8N446 348 aa21.06■□□□□ 0.96
CPNE1-216ENST00000437340 TMEM147Q9BVK8 224 aa21.06■□□□□ 0.96
CPNE1-216ENST00000437340 SMDT1Q9H4I9 107 aa21.06■□□□□ 0.96
CPNE1-216ENST00000437340 TIMM9Q9Y5J7 89 aa21.06■□□□□ 0.96
CPNE1-216ENST00000437340 CCL3L1P16619 93 aa21.05■□□□□ 0.96
CPNE1-216ENST00000437340 OR2B8PP59922 312 aa21.05■□□□□ 0.96
CPNE1-216ENST00000437340 RPP30P78346 268 aaKnown RBP21.05■□□□□ 0.96
CPNE1-216ENST00000437340 DHRS7BQ6IAN0 325 aaPredicted RBP21.05■□□□□ 0.96
CPNE1-216ENST00000437340 ZNF833PQ6ZTB9 187 aa21.05■□□□□ 0.96
CPNE1-216ENST00000437340 ITLN2Q8WWU7 325 aaPredicted RBP21.05■□□□□ 0.96
CPNE1-216ENST00000437340 TAF15Q92804 592 aaKnown RBP eCLIP21.05■□□□□ 0.961e-6■□□□□ 9.7
CPNE1-216ENST00000437340 HRASP01112 189 aa21.05■□□□□ 0.96
CPNE1-216ENST00000437340 HBE1P02100 147 aa21.05■□□□□ 0.96
CPNE1-216ENST00000437340 CT45A6P0DMU7 189 aa21.05■□□□□ 0.96
CPNE1-216ENST00000437340 CT45A5P0DMU8 189 aa21.05■□□□□ 0.96
CPNE1-216ENST00000437340 CT45A7P0DMV0 189 aa21.05■□□□□ 0.96
CPNE1-216ENST00000437340 GUCA2BQ16661 112 aa21.05■□□□□ 0.96
CPNE1-216ENST00000437340 SPSB3Q6PJ21 355 aa21.05■□□□□ 0.96
CPNE1-216ENST00000437340 VKORC1L1Q8N0U8 176 aa21.05■□□□□ 0.96
CPNE1-216ENST00000437340 PUSL1Q8N0Z8 303 aaKnown RBP21.05■□□□□ 0.96
CPNE1-216ENST00000437340 LINC00311Q8N616 119 aa21.05■□□□□ 0.96
CPNE1-216ENST00000437340 RHOVQ96L33 236 aa21.05■□□□□ 0.96
CPNE1-216ENST00000437340 CLCC1Q96S66 551 aa21.05■□□□□ 0.96
CPNE1-216ENST00000437340 RSG1Q9BU20 258 aa21.05■□□□□ 0.96
CPNE1-216ENST00000437340 TRBV23-1A0A0A0MS06 115 aa21.04■□□□□ 0.96
CPNE1-216ENST00000437340 C9JQL5 133 aa21.04■□□□□ 0.96
CPNE1-216ENST00000437340 SNAPINO95295 136 aa21.04■□□□□ 0.96
CPNE1-216ENST00000437340 ARG1P05089 322 aa21.04■□□□□ 0.96
CPNE1-216ENST00000437340 CENPVQ7Z7K6 275 aaPredicted RBP21.04■□□□□ 0.96
CPNE1-216ENST00000437340 SREK1IP1Q8N9Q2 155 aaPredicted RBP21.04■□□□□ 0.96
CPNE1-216ENST00000437340 ZNF596Q8TC21 504 aa21.04■□□□□ 0.96
CPNE1-216ENST00000437340 EIF5A2Q9GZV4 153 aaKnown RBP21.04■□□□□ 0.96
CPNE1-216ENST00000437340 C15orf61A6NNL5 157 aa21.03■□□□□ 0.96
CPNE1-216ENST00000437340 RAB2AP61019 212 aa21.03■□□□□ 0.96
CPNE1-216ENST00000437340 TAGLNQ01995 201 aaKnown RBP21.03■□□□□ 0.96
CPNE1-216ENST00000437340 RTL8BQ17RB0 113 aa21.03■□□□□ 0.96
CPNE1-216ENST00000437340 VWC2Q2TAL6 325 aa21.03■□□□□ 0.96
CPNE1-216ENST00000437340 TMEM155Q4W5P6 130 aa21.03■□□□□ 0.96
CPNE1-216ENST00000437340 TRAV1-1A0A0B4J248 108 aa21.02■□□□□ 0.96
CPNE1-216ENST00000437340 DLX6P56179 175 aa21.02■□□□□ 0.96
CPNE1-216ENST00000437340 OR4A47Q6IF82 309 aa21.02■□□□□ 0.96
CPNE1-216ENST00000437340 FAM71F2Q6NXP2 309 aa21.02■□□□□ 0.96
CPNE1-216ENST00000437340 AIFM2Q9BRQ8 373 aa21.02■□□□□ 0.96
CPNE1-216ENST00000437340 KIAA1456Q9P272 454 aa21.02■□□□□ 0.96
CPNE1-216ENST00000437340 FOXA2Q9Y261 457 aaPredicted RBP21.02■□□□□ 0.96
CPNE1-216ENST00000437340 KPTNQ9Y664 436 aa21.02■□□□□ 0.96
CPNE1-216ENST00000437340 UBE2L5PA0A1B0GUS4 154 aa21.02■□□□□ 0.96
CPNE1-216ENST00000437340 C15orf62A8K5M9 175 aa21.02■□□□□ 0.96
CPNE1-216ENST00000437340 VDAC2P45880 294 aaPredicted RBP21.02■□□□□ 0.96
CPNE1-216ENST00000437340 SPINK9Q5DT21 86 aa21.02■□□□□ 0.96
CPNE1-216ENST00000437340 RBMXL1Q96E39 390 aaKnown RBP21.02■□□□□ 0.96
CPNE1-216ENST00000437340 SLC35D1Q9NTN3 355 aa21.02■□□□□ 0.96
CPNE1-216ENST00000437340 A0A087X0M5 115 aa21.01■□□□□ 0.95
CPNE1-216ENST00000437340 TRAV3A0A0B4J244 114 aa21.01■□□□□ 0.95
CPNE1-216ENST00000437340 A0A1B0GX30 115 aa21.01■□□□□ 0.95
CPNE1-216ENST00000437340 GPR37O15354 613 aa21.01■□□□□ 0.95
CPNE1-216ENST00000437340 ERVFRD-1P60508 538 aa21.01■□□□□ 0.95
CPNE1-216ENST00000437340 AGAP20933 346 aa21■□□□□ 0.95
CPNE1-216ENST00000437340 COL8A2P25067 703 aa21■□□□□ 0.95
CPNE1-216ENST00000437340 TMEM14BQ9NUH8 114 aa21■□□□□ 0.95
CPNE1-216ENST00000437340 SPTBN1Q01082 2364 aaKnown RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms