RNA–Protein interactions for RNA: ENST00000437034.6

CAST-209, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 3,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-209ENST00000437034 S1PR3Q99500 378 aa4.45□□□□□ -1.7
CAST-209ENST00000437034 TMEM106BQ9NUM4 274 aa4.45□□□□□ -1.7
CAST-209ENST00000437034 DYSFO75923 2080 aa4.45□□□□□ -1.7
CAST-209ENST00000437034 PLXNA1Q9UIW2 1896 aa4.45□□□□□ -1.7
CAST-209ENST00000437034 MGAMO43451 1857 aa4.45□□□□□ -1.7
CAST-209ENST00000437034 GRIFINA4D1Z8 144 aa4.45□□□□□ -1.7
CAST-209ENST00000437034 NAP1L6A6NFF2 107 aa4.45□□□□□ -1.7
CAST-209ENST00000437034 FGF10O15520 208 aaPredicted RBP4.45□□□□□ -1.7
CAST-209ENST00000437034 TYROBPO43914 113 aa4.45□□□□□ -1.7
CAST-209ENST00000437034 TIAF1O95411 115 aa4.45□□□□□ -1.7
CAST-209ENST00000437034 LGALS1P09382 135 aaKnown RBP4.45□□□□□ -1.7
CAST-209ENST00000437034 ZNF37AP17032 561 aaPredicted RBP4.45□□□□□ -1.7
CAST-209ENST00000437034 PFN2P35080 140 aa4.45□□□□□ -1.7
CAST-209ENST00000437034 HERV-K104P61576 105 aa4.45□□□□□ -1.7
CAST-209ENST00000437034 PPP1CBP62140 327 aa4.45□□□□□ -1.7
CAST-209ENST00000437034 IGFL2Q6UWQ7 119 aa4.45□□□□□ -1.7
CAST-209ENST00000437034 TMEM150AQ86TG1 271 aa4.45□□□□□ -1.7
CAST-209ENST00000437034 TM2D1Q9BX74 207 aa4.45□□□□□ -1.7
CAST-209ENST00000437034 REEP1Q9H902 201 aa4.45□□□□□ -1.7
CAST-209ENST00000437034 RARRES3Q9UL19 164 aa4.45□□□□□ -1.7
CAST-209ENST00000437034 SPCS1Q9Y6A9 102 aa4.45□□□□□ -1.7
CAST-209ENST00000437034 TMED7-TICAM2A0A0A6YYA0 188 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 GGTLC3B5MD39 225 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 GABARAPH6UMI1 98 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 CTSEP14091 401 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 SDC2P34741 201 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 C17orf64Q86WR6 236 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 ANKRD29Q8N6D5 301 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 OR11H6Q8NGC7 330 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 BRK1Q8WUW1 75 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 TWIST2Q8WVJ9 160 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 RTN4IP1Q8WWV3 396 aaPredicted RBP4.44□□□□□ -1.7
CAST-209ENST00000437034 EMC6Q9BV81 110 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 ISG20L2Q9H9L3 353 aaKnown RBP4.44□□□□□ -1.7
CAST-209ENST00000437034 PCTPQ9UKL6 214 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 U3KQE9 123 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 COL4A4P53420 1690 aaPredicted RBP4.44□□□□□ -1.7
CAST-209ENST00000437034 TCRBV3S1A0A5B6 114 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 J3QQQ9 107 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 PMS2P2O95744 297 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 CD58P19256 250 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 ADMP35318 185 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 SLC35A1P78382 337 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 ANKRD34AQ69YU3 496 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 SPSB3Q6PJ21 355 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 CEACAM19Q7Z692 300 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 LINC00482Q8N8I6 264 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 FAM213BQ8TBF2 198 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 ADAT3Q96EY9 351 aaPredicted RBP4.44□□□□□ -1.7
CAST-209ENST00000437034 BMFQ96LC9 184 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 ZNF670Q9BS34 389 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 SSBP3Q9BWW4 388 aaPredicted RBP4.44□□□□□ -1.7
CAST-209ENST00000437034 GNB1LQ9BYB4 327 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 GLIPR2Q9H4G4 154 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 BANF2Q9H503 90 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 COMMD9Q9P000 198 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 hCG_1818297A0A087WSY0 165 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 ZC3H12DA2A288 527 aaKnown RBP4.44□□□□□ -1.7
CAST-209ENST00000437034 A8MT66 165 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 H7C1H1 209 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 CRLF1O75462 422 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 MRPL3P09001 348 aaKnown RBP4.44□□□□□ -1.7
CAST-209ENST00000437034 SCTP09683 121 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 LINC00032P0C843 101 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 ZNF93P35789 620 aaPredicted RBP4.44□□□□□ -1.7
CAST-209ENST00000437034 GSG1Q2KHT4 349 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 MPV17L2Q567V2 206 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 SFRP4Q6FHJ7 346 aaPredicted RBP4.44□□□□□ -1.7
CAST-209ENST00000437034 SLC35E4Q6ICL7 350 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 ZNF534Q76KX8 674 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 ANKRD37Q7Z713 158 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 SGPP2Q8IWX5 399 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 GAPTQ8N292 157 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 PGBD5Q8N414 524 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 ZNF114Q8NC26 417 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 MRPL24Q96A35 216 aaKnown RBP4.44□□□□□ -1.7
CAST-209ENST00000437034 Q96M66 194 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 PARLQ9H300 379 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 NRN1Q9NPD7 142 aa4.44□□□□□ -1.7
CAST-209ENST00000437034 COL11A1P12107 1806 aaPredicted RBP4.43□□□□□ -1.7
CAST-209ENST00000437034 TRAV5A0A0B4J249 113 aa4.43□□□□□ -1.7
CAST-209ENST00000437034 F6UB75 175 aa4.43□□□□□ -1.7
CAST-209ENST00000437034 M0R1B8 84 aa4.43□□□□□ -1.7
CAST-209ENST00000437034 ZNF593O00488 134 aaPredicted RBP4.43□□□□□ -1.7
CAST-209ENST00000437034 EDIL3O43854 480 aa4.43□□□□□ -1.7
CAST-209ENST00000437034 C1RP00736 705 aa4.43□□□□□ -1.7
CAST-209ENST00000437034 GTF3C1Q12789 2109 aa4.43□□□□□ -1.7
CAST-209ENST00000437034 ZNF672Q499Z4 452 aaPredicted RBP4.43□□□□□ -1.7
CAST-209ENST00000437034 DOCK8Q8NF50 2099 aa4.43□□□□□ -1.7
CAST-209ENST00000437034 LINC01587Q99440 93 aa4.43□□□□□ -1.7
CAST-209ENST00000437034 AGMATQ9BSE5 352 aa4.43□□□□□ -1.7
CAST-209ENST00000437034 Q9H8V8 135 aa4.43□□□□□ -1.7
CAST-209ENST00000437034 OR5V1Q9UGF6 321 aa4.43□□□□□ -1.7
CAST-209ENST00000437034 RPUSD1Q9UJJ7 312 aaKnown RBP4.43□□□□□ -1.7
CAST-209ENST00000437034 MUC21A0A140T8X8 626 aa4.43□□□□□ -1.7
CAST-209ENST00000437034 ZNF727A8MUV8 499 aa4.43□□□□□ -1.7
CAST-209ENST00000437034 DPM2O94777 84 aa4.43□□□□□ -1.7
CAST-209ENST00000437034 HLA-DQA2P01906 255 aa4.43□□□□□ -1.7
CAST-209ENST00000437034 TPT1P13693 172 aaKnown RBP4.43□□□□□ -1.7
CAST-209ENST00000437034 PPIBP23284 216 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms