RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 NUFIP2Q7Z417 695 aaKnown RBP10.4□□□□□ -0.74
TMEM116-202ENST00000437003 BAGE3Q86Y29 109 aa10.4□□□□□ -0.74
TMEM116-202ENST00000437003 BAGE2Q86Y30 109 aa10.4□□□□□ -0.74
TMEM116-202ENST00000437003 MKXQ8IYA7 352 aa10.4□□□□□ -0.74
TMEM116-202ENST00000437003 OR1L1Q8NH94 360 aa10.4□□□□□ -0.74
TMEM116-202ENST00000437003 TMEM45BQ96B21 275 aa10.4□□□□□ -0.74
TMEM116-202ENST00000437003 CIB3Q96Q77 187 aaPredicted RBP10.4□□□□□ -0.74
TMEM116-202ENST00000437003 RNF114Q9Y508 228 aa10.4□□□□□ -0.74
TMEM116-202ENST00000437003 GPR179Q6PRD1 2367 aa10.4□□□□□ -0.74
TMEM116-202ENST00000437003 MLNRO43193 412 aa10.4□□□□□ -0.74
TMEM116-202ENST00000437003 COX5AP20674 150 aa10.4□□□□□ -0.74
TMEM116-202ENST00000437003 UBE2NP61088 152 aaKnown RBP10.4□□□□□ -0.74
TMEM116-202ENST00000437003 SPATA46Q5T0L3 261 aa10.4□□□□□ -0.74
TMEM116-202ENST00000437003 ABHD17BQ5VST6 288 aa10.4□□□□□ -0.74
TMEM116-202ENST00000437003 Q6ZVH6 145 aa10.4□□□□□ -0.74
TMEM116-202ENST00000437003 OR2M7Q8NG81 312 aa10.4□□□□□ -0.74
TMEM116-202ENST00000437003 LSM10Q969L4 123 aaKnown RBP10.4□□□□□ -0.74
TMEM116-202ENST00000437003 FAM173AQ9BQD7 235 aa10.4□□□□□ -0.74
TMEM116-202ENST00000437003 GAL3ST2Q9H3Q3 398 aa10.4□□□□□ -0.74
TMEM116-202ENST00000437003 LOC400499M0QZD8 3231 aa10.4□□□□□ -0.75
TMEM116-202ENST00000437003 PCSK5Q92824 1860 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 TRAV38-1A0A0B4J264 116 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 TRAV34A0A0B4J273 112 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 NEURL1O76050 574 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 KRASP01116 189 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 IGLV2-14P01704 120 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 FRMD6-AS1P0C7T7 363 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 CRISP2P16562 243 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 MSMO1Q15800 293 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 NRN1LQ496H8 165 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 SHISA2Q6UWI4 295 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 COLCA1Q6ZS62 124 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 S100A7AQ86SG5 101 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 NUDT10Q8NFP7 164 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 OR5AU1Q8NGC0 362 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 RNASE8Q8TDE3 154 aaKnown RBP10.39□□□□□ -0.75
TMEM116-202ENST00000437003 NANOS1Q8WY41 292 aaKnown RBP10.39□□□□□ -0.75
TMEM116-202ENST00000437003 SFRP2Q96HF1 295 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 ZNF479Q96JC4 524 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 B4GALT7Q9UBV7 327 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 ZFP30Q9Y2G7 519 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 IGKV3D-15A0A087WSY6 115 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 MDFIC2A0A1B0GVS7 189 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 MAGEA5P43359 124 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 LHX2P50458 406 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 ZXDAP98168 799 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 CEACAM21Q3KPI0 293 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 TMEM14EPQ6UXP3 125 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 BTF3L4Q96K17 158 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 ZNF703Q9H7S9 590 aaPredicted RBP10.39□□□□□ -0.75
TMEM116-202ENST00000437003 MED13Q9UHV7 2174 aa10.39□□□□□ -0.75
TMEM116-202ENST00000437003 AQP7O14520 342 aa10.38□□□□□ -0.75
TMEM116-202ENST00000437003 KITLGP21583 273 aa10.38□□□□□ -0.75
TMEM116-202ENST00000437003 TRAT1Q6PIZ9 186 aa10.38□□□□□ -0.75
TMEM116-202ENST00000437003 LINC00696Q6ZRV3 163 aa10.38□□□□□ -0.75
TMEM116-202ENST00000437003 FGFRL1Q8N441 504 aa10.38□□□□□ -0.75
TMEM116-202ENST00000437003 STPG4Q8N801 248 aa10.38□□□□□ -0.75
TMEM116-202ENST00000437003 ZDHHC16Q969W1 377 aa10.38□□□□□ -0.75
TMEM116-202ENST00000437003 SLC35E1Q96K37 410 aa10.38□□□□□ -0.75
TMEM116-202ENST00000437003 TIMM9Q9Y5J7 89 aa10.38□□□□□ -0.75
TMEM116-202ENST00000437003 TRBV20OR9-2A0A075B6H5 130 aa10.38□□□□□ -0.75
TMEM116-202ENST00000437003 F6UZH7 168 aa10.38□□□□□ -0.75
TMEM116-202ENST00000437003 SLC17A3O00476 420 aa10.38□□□□□ -0.75
TMEM116-202ENST00000437003 SYNGR4O95473 234 aa10.38□□□□□ -0.75
TMEM116-202ENST00000437003 CLDN18P56856 261 aa10.38□□□□□ -0.75
TMEM116-202ENST00000437003 ZNF90Q03938 601 aa10.38□□□□□ -0.75
TMEM116-202ENST00000437003 GUCD1Q96NT3 240 aa10.38□□□□□ -0.75
TMEM116-202ENST00000437003 NPCDR1Q9BY65 106 aa10.38□□□□□ -0.75
TMEM116-202ENST00000437003 MRPL18Q9H0U6 180 aaKnown RBP10.38□□□□□ -0.75
TMEM116-202ENST00000437003 C9orf172C9J069 976 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 SIRPB1O00241 398 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 RHBDL1O75783 438 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 G6PCP35575 357 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 RANP62826 216 aaKnown RBP10.37□□□□□ -0.75
TMEM116-202ENST00000437003 PAFAH1B2P68402 229 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 ZNF816Q0VGE8 651 aaPredicted RBP10.37□□□□□ -0.75
TMEM116-202ENST00000437003 FOXL1Q12952 345 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 FBXW9Q5XUX1 488 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 APOBEC3DQ96AK3 386 aaPredicted RBP10.37□□□□□ -0.75
TMEM116-202ENST00000437003 TMEM147Q9BVK8 224 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 LINC00470Q9BZP3 86 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 FBXL7Q9UJT9 491 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 C20orf202A1L168 122 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 FAM90A10PA6NDY2 464 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 FAM90A18PA6NE21 464 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 FAM90A16PA6NEW6 464 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 FAM90A20PA6NIJ5 464 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 FAM90A8PA6NJQ4 464 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 FAM90A7PA6NKC0 464 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 FAM90A22PA8MWA6 464 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 FAM90A12PA8MX19 464 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 FAM90A5PA8MXJ8 464 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 FAM90A23PA8MXZ1 464 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 SH2D1BO14796 132 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 SPINK4O60575 86 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 ZG16O60844 167 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 RAMP3O60896 148 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 RBMXL2O75526 392 aaKnown RBP10.37□□□□□ -0.75
TMEM116-202ENST00000437003 FAM90A15PP0C7V4 464 aa10.37□□□□□ -0.75
TMEM116-202ENST00000437003 FAM90A13PP0C7W8 464 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms