RNA–Protein interactions for RNA: ENST00000436282.1

TOP3B-206, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 2,890 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-206ENST00000436282 TRAV38-1A0A0B4J264 116 aa12.48□□□□□ -0.41
TOP3B-206ENST00000436282 A6NNC1 897 aa12.48□□□□□ -0.41
TOP3B-206ENST00000436282 MT-CO3P00414 261 aa12.48□□□□□ -0.41
TOP3B-206ENST00000436282 CD59P13987 128 aa12.48□□□□□ -0.41
TOP3B-206ENST00000436282 TMEM183BQ1AE95 376 aa12.48□□□□□ -0.41
TOP3B-206ENST00000436282 ATP1A1-AS1Q5TC04 95 aa12.48□□□□□ -0.41
TOP3B-206ENST00000436282 APH1AQ96BI3 265 aa12.48□□□□□ -0.41
TOP3B-206ENST00000436282 R4GN57 208 aa12.48□□□□□ -0.41
TOP3B-206ENST00000436282 TRBV20OR9-2A0A075B6H5 130 aa12.48□□□□□ -0.41
TOP3B-206ENST00000436282 ERVK11-1P61568 191 aa12.48□□□□□ -0.41
TOP3B-206ENST00000436282 GCSAMLQ5JQS6 135 aa12.48□□□□□ -0.41
TOP3B-206ENST00000436282 ZNF808Q8N4W9 903 aaPredicted RBP12.48□□□□□ -0.41
TOP3B-206ENST00000436282 RTL8AQ9BWD3 113 aa12.48□□□□□ -0.41
TOP3B-206ENST00000436282 TRAV9-1A0A075B6T8 112 aa12.48□□□□□ -0.41
TOP3B-206ENST00000436282 A0A1W2PPV4 95 aa12.48□□□□□ -0.41
TOP3B-206ENST00000436282 C17orf98A8MV24 154 aa12.48□□□□□ -0.41
TOP3B-206ENST00000436282 TNFSF15O95150 251 aa12.48□□□□□ -0.41
TOP3B-206ENST00000436282 CD33P20138 364 aa12.48□□□□□ -0.41
TOP3B-206ENST00000436282 TIMP3P35625 211 aa12.48□□□□□ -0.41
TOP3B-206ENST00000436282 LINC00310P59036 64 aa12.48□□□□□ -0.41
TOP3B-206ENST00000436282 TRIP6Q15654 476 aaKnown RBP12.48□□□□□ -0.41
TOP3B-206ENST00000436282 H2BFWTQ7Z2G1 175 aa12.48□□□□□ -0.41
TOP3B-206ENST00000436282 OR10G8Q8NGN5 311 aa12.48□□□□□ -0.41
TOP3B-206ENST00000436282 DEFB127Q9H1M4 99 aa12.48□□□□□ -0.41
TOP3B-206ENST00000436282 KCNIP1Q9NZI2 227 aa12.48□□□□□ -0.41
TOP3B-206ENST00000436282 FRYQ5TBA9 3013 aa12.47□□□□□ -0.41
TOP3B-206ENST00000436282 MED12LQ86YW9 2145 aa12.47□□□□□ -0.41
TOP3B-206ENST00000436282 NPSP0C0P6 89 aa12.47□□□□□ -0.41
TOP3B-206ENST00000436282 LINC00614P0C842 121 aa12.47□□□□□ -0.41
TOP3B-206ENST00000436282 BRWD1-AS2P59051 145 aa12.47□□□□□ -0.41
TOP3B-206ENST00000436282 TDRG1Q3Y452 100 aa12.47□□□□□ -0.41
TOP3B-206ENST00000436282 WDR86Q86TI4 376 aa12.47□□□□□ -0.41
TOP3B-206ENST00000436282 PATZ1Q9HBE1 687 aaKnown RBP12.47□□□□□ -0.41
TOP3B-206ENST00000436282 POLDIP2Q9Y2S7 368 aa12.47□□□□□ -0.41
TOP3B-206ENST00000436282 C15orf62A8K5M9 175 aa12.47□□□□□ -0.41
TOP3B-206ENST00000436282 SH2D1BO14796 132 aa12.47□□□□□ -0.41
TOP3B-206ENST00000436282 RBMXL2O75526 392 aaKnown RBP12.47□□□□□ -0.41
TOP3B-206ENST00000436282 CD1BP29016 333 aa12.47□□□□□ -0.41
TOP3B-206ENST00000436282 BRS3P32247 399 aa12.47□□□□□ -0.41
TOP3B-206ENST00000436282 MEOX1P50221 254 aa12.47□□□□□ -0.41
TOP3B-206ENST00000436282 ZNF146Q15072 292 aa12.47□□□□□ -0.41
TOP3B-206ENST00000436282 SPINK9Q5DT21 86 aa12.47□□□□□ -0.41
TOP3B-206ENST00000436282 GALMQ96C23 342 aa12.47□□□□□ -0.41
TOP3B-206ENST00000436282 GMPPAQ96IJ6 420 aaPredicted RBP12.47□□□□□ -0.41
TOP3B-206ENST00000436282 M0R296 226 aa12.46□□□□□ -0.41
TOP3B-206ENST00000436282 CDX4O14627 284 aaPredicted RBP12.46□□□□□ -0.41
TOP3B-206ENST00000436282 SERF1AO75920 110 aa12.46□□□□□ -0.41
TOP3B-206ENST00000436282 CRISP2P16562 243 aa12.46□□□□□ -0.41
TOP3B-206ENST00000436282 EDDM3BP56851 147 aa12.46□□□□□ -0.41
TOP3B-206ENST00000436282 TCTEX1D1Q8N7M0 179 aa12.46□□□□□ -0.41
TOP3B-206ENST00000436282 SCCPDHQ8NBX0 429 aa12.46□□□□□ -0.41
TOP3B-206ENST00000436282 HSPB9Q9BQS6 159 aa12.46□□□□□ -0.41
TOP3B-206ENST00000436282 VAMP8Q9BV40 100 aa12.46□□□□□ -0.41
TOP3B-206ENST00000436282 C21orf140B9A014 251 aa12.46□□□□□ -0.42
TOP3B-206ENST00000436282 CBLN1P23435 193 aa12.46□□□□□ -0.42
TOP3B-206ENST00000436282 TAAR6Q96RI8 345 aa12.46□□□□□ -0.42
TOP3B-206ENST00000436282 LPAR2Q9HBW0 351 aa12.46□□□□□ -0.42
TOP3B-206ENST00000436282 NXPH2O95156 264 aa12.45□□□□□ -0.42
TOP3B-206ENST00000436282 ZNF90Q03938 601 aa12.45□□□□□ -0.42
TOP3B-206ENST00000436282 HES3Q5TGS1 186 aa12.45□□□□□ -0.42
TOP3B-206ENST00000436282 MRPL18Q9H0U6 180 aaKnown RBP12.45□□□□□ -0.42
TOP3B-206ENST00000436282 IL36BQ9NZH7 164 aa12.45□□□□□ -0.42
TOP3B-206ENST00000436282 PAM16Q9Y3D7 125 aa12.45□□□□□ -0.42
TOP3B-206ENST00000436282 TMEM30CPA0ZSE6 113 aa12.45□□□□□ -0.42
TOP3B-206ENST00000436282 C12orf77C9JDV5 145 aa12.45□□□□□ -0.42
TOP3B-206ENST00000436282 ARL14EPLP0DKL9 152 aa12.45□□□□□ -0.42
TOP3B-206ENST00000436282 CDKN1AP38936 164 aa12.45□□□□□ -0.42
TOP3B-206ENST00000436282 TNFSF10P50591 281 aa12.45□□□□□ -0.42
TOP3B-206ENST00000436282 SPATA46Q5T0L3 261 aa12.45□□□□□ -0.42
TOP3B-206ENST00000436282 LRP11Q86VZ4 500 aa12.45□□□□□ -0.42
TOP3B-206ENST00000436282 OR5AU1Q8NGC0 362 aa12.45□□□□□ -0.42
TOP3B-206ENST00000436282 OCC1Q8TAD7 63 aa12.45□□□□□ -0.42
TOP3B-206ENST00000436282 QTRT1Q9BXR0 403 aaKnown RBP12.45□□□□□ -0.42
TOP3B-206ENST00000436282 GTF3C1Q12789 2109 aa12.45□□□□□ -0.42
TOP3B-206ENST00000436282 EP300Q09472 2414 aaPredicted RBP12.45□□□□□ -0.42
TOP3B-206ENST00000436282 COL27A1Q8IZC6 1860 aaPredicted RBP12.45□□□□□ -0.42
TOP3B-206ENST00000436282 SCO2A0A1W2PP80 73 aa12.44□□□□□ -0.42
TOP3B-206ENST00000436282 MPDU1O75352 247 aa12.44□□□□□ -0.42
TOP3B-206ENST00000436282 SP1P08047 785 aa12.44□□□□□ -0.42
TOP3B-206ENST00000436282 OR52L2PQ8NGH6 319 aa12.44□□□□□ -0.42
TOP3B-206ENST00000436282 OR2J1Q9GZK6 312 aa12.44□□□□□ -0.42
TOP3B-206ENST00000436282 CBY1Q9Y3M2 126 aa12.44□□□□□ -0.42
TOP3B-206ENST00000436282 PCNX2A6NKB5 2137 aa12.44□□□□□ -0.42
TOP3B-206ENST00000436282 USF3Q68DE3 2245 aa12.44□□□□□ -0.42
TOP3B-206ENST00000436282 STAG3L2P0CL84 134 aa12.44□□□□□ -0.42
TOP3B-206ENST00000436282 STAG3L3P0CL85 134 aa12.44□□□□□ -0.42
TOP3B-206ENST00000436282 OPRK1P41145 380 aa12.44□□□□□ -0.42
TOP3B-206ENST00000436282 VN1R17PQ8TDU5 208 aa12.44□□□□□ -0.42
TOP3B-206ENST00000436282 CACNA1HO95180 2353 aa12.44□□□□□ -0.42
TOP3B-206ENST00000436282 WISP2O76076 250 aa12.44□□□□□ -0.42
TOP3B-206ENST00000436282 CXorf1O96002 111 aa12.44□□□□□ -0.42
TOP3B-206ENST00000436282 HNF1AP20823 631 aa12.44□□□□□ -0.42
TOP3B-206ENST00000436282 ARSJQ5FYB0 599 aaPredicted RBP12.44□□□□□ -0.42
TOP3B-206ENST00000436282 FAM53AQ6NSI3 398 aaPredicted RBP12.44□□□□□ -0.42
TOP3B-206ENST00000436282 TMPRSS7Q7RTY8 843 aa12.44□□□□□ -0.42
TOP3B-206ENST00000436282 TTC28Q96AY4 2481 aa12.43□□□□□ -0.42
TOP3B-206ENST00000436282 IL6RP08887 468 aaPredicted RBP12.43□□□□□ -0.42
TOP3B-206ENST00000436282 THBS3P49746 956 aa12.43□□□□□ -0.42
TOP3B-206ENST00000436282 Q0VG73 95 aa12.43□□□□□ -0.42
TOP3B-206ENST00000436282 NINJ1Q92982 152 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms