RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 RSPO1Q2MKA7 263 aaPredicted RBP6.33□□□□□ -1.4
CPSF6-202ENST00000435070 Q8N976 141 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 TMEM178AQ8NBL3 297 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 OCC1Q8TAD7 63 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 ZNF837Q96EG3 531 aaPredicted RBP6.33□□□□□ -1.4
CPSF6-202ENST00000435070 TIMD4Q96H15 378 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 ZNF318Q5VUA4 2279 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 DEGS1O15121 323 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 SLC25A47Q6Q0C1 308 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 GJC3Q8NFK1 279 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 OR13H1Q8NG92 308 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 GPR27Q9NS67 375 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 GNG12Q9UBI6 72 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 YLPM1P49750 1951 aaKnown RBP6.33□□□□□ -1.4
CPSF6-202ENST00000435070 NCBP2LA6PVI3 153 aaKnown RBP6.33□□□□□ -1.4
CPSF6-202ENST00000435070 TOMM40O96008 361 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 MPV17L2Q567V2 206 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 RDH5Q92781 318 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 HSPB7Q9UBY9 170 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 A0A1W2PN81 502 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 IGHV3-9P01782 118 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 BMI1P35226 326 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 MRPL54Q6P161 138 aaKnown RBP6.33□□□□□ -1.4
CPSF6-202ENST00000435070 C6orf15Q6UXA7 325 aaPredicted RBP6.33□□□□□ -1.4
CPSF6-202ENST00000435070 ZNF430Q9H8G1 570 aaPredicted RBP6.33□□□□□ -1.4
CPSF6-202ENST00000435070 OBP2AQ9NY56 170 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 BLACEA4D250 179 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 HYAL1Q12794 435 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 PLPPR5Q32ZL2 321 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 ASPHD1Q5U4P2 390 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 C16orf54Q6UWD8 224 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 APOBEC3DQ96AK3 386 aaPredicted RBP6.33□□□□□ -1.4
CPSF6-202ENST00000435070 OR1L1Q8NH94 360 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 KLRC4-KLRK1H3BQV0 150 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 M0R1X1 148 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 VENTXO95231 258 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 PPBPP02775 128 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 COX5AP20674 150 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 FUT6P51993 359 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 FOXL1Q12952 345 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 PRDX4Q13162 271 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 AP5S1Q9NUS5 200 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 TRGV8A0A0C4DH27 118 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 IGHV5-51A0A0C4DH38 117 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 SCO2A0A1W2PP80 73 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 SRIP30626 198 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 STUMQ69YW2 141 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 ABHD14BQ96IU4 210 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 IGKV1-6A0A0C4DH72 117 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 CD99P14209 185 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 G6PCP35575 357 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 YPEL3P61236 119 aaPredicted RBP6.32□□□□□ -1.4
CPSF6-202ENST00000435070 TMEM108Q6UXF1 575 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 OR10X1Q8NGY0 326 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 CLEC7AQ9BXN2 247 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 TRIOO75962 3097 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 FAM181BA6NEQ2 426 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 ZNF83P51522 516 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 FXYD3Q14802 87 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 ABHD3Q8WU67 409 aa6.32□□□□□ -1.4
CPSF6-202ENST00000435070 TRAV30A0A087WSZ9 112 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 A0A1W2PS18 150 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 IGKV1-39P01597 117 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 IGKV1D-39P04432 117 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 TCTAP57738 103 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 TMEM211Q6ICI0 200 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 SPSB1Q96BD6 273 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 VWCEQ96DN2 955 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 A0A1W2PQD3 144 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 H0Y980 276 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 MLNRO43193 412 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 IGKV1-5P01602 117 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 COL9A1P20849 921 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 MRPS21P82921 87 aaKnown RBP6.31□□□□□ -1.4
CPSF6-202ENST00000435070 NHLH1Q02575 133 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 C17orf67Q0P5P2 114 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 TMEM196Q5HYL7 178 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 NIT1Q86X76 327 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 TUSC5Q8IXB3 177 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 SEPSECSQ9HD40 501 aaKnown RBP6.31□□□□□ -1.4
CPSF6-202ENST00000435070 ZNF815PA8K554 130 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 PRRX1P54821 245 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 ADIPOQQ15848 244 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 CLUHP3Q96NS8 147 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 PCDH15Q96QU1 1955 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 A0A0U1RQV5 110 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 ARR3P36575 388 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 CATR1Q13166 79 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 GMPPAQ96IJ6 420 aaPredicted RBP6.31□□□□□ -1.4
CPSF6-202ENST00000435070 VPS13AQ96RL7 3174 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 IGHV3-64DA0A0J9YX35 117 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 OR5AL1P0C617 328 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 TIMP3P35625 211 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 SAMD13Q5VXD3 122 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 NAA38Q9BRA0 125 aaKnown RBP6.31□□□□□ -1.4
CPSF6-202ENST00000435070 CRIM1Q9NZV1 1036 aa6.31□□□□□ -1.4
CPSF6-202ENST00000435070 PDE6DO43924 150 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 CLDN14O95500 239 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 CA2P00918 260 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 IGLL1P15814 213 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms