RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 PAGE4O60829 102 aa11.34□□□□□ -0.59
COL6A3-207ENST00000433762 CGAP01215 116 aa11.34□□□□□ -0.59
COL6A3-207ENST00000433762 VWA1Q6PCB0 445 aa11.34□□□□□ -0.59
COL6A3-207ENST00000433762 GCSAMQ8N6F7 178 aa11.34□□□□□ -0.59
COL6A3-207ENST00000433762 ZNF383Q8NA42 475 aa11.34□□□□□ -0.59
COL6A3-207ENST00000433762 OR4A16Q8NH70 328 aa11.34□□□□□ -0.59
COL6A3-207ENST00000433762 HIST1H2BLQ99880 126 aa11.34□□□□□ -0.59
COL6A3-207ENST00000433762 QTRT1Q9BXR0 403 aaKnown RBP11.34□□□□□ -0.59
COL6A3-207ENST00000433762 PRDM13Q9H4Q3 707 aa11.34□□□□□ -0.59
COL6A3-207ENST00000433762 METRNQ9UJH8 293 aa11.34□□□□□ -0.59
COL6A3-207ENST00000433762 PROCRQ9UNN8 238 aa11.34□□□□□ -0.59
COL6A3-207ENST00000433762 AGFG2O95081 481 aa11.34□□□□□ -0.59
COL6A3-207ENST00000433762 OR9G9P0C7N8 305 aa11.34□□□□□ -0.59
COL6A3-207ENST00000433762 NBL1P41271 181 aa11.34□□□□□ -0.59
COL6A3-207ENST00000433762 PRAMEF5Q5TYX0 476 aa11.34□□□□□ -0.59
COL6A3-207ENST00000433762 IGF2-ASQ6U949 168 aa11.34□□□□□ -0.59
COL6A3-207ENST00000433762 BHLHA15Q7RTS1 189 aaPredicted RBP11.34□□□□□ -0.59
COL6A3-207ENST00000433762 OR2T10Q8NGZ9 312 aa11.34□□□□□ -0.59
COL6A3-207ENST00000433762 OR1P1Q8NH06 330 aa11.34□□□□□ -0.59
COL6A3-207ENST00000433762 PACRGQ96M98 296 aaPredicted RBP11.34□□□□□ -0.59
COL6A3-207ENST00000433762 SLC25A15Q9Y619 301 aa11.34□□□□□ -0.59
COL6A3-207ENST00000433762 ARL2-SNX15V9GYD0 113 aa11.34□□□□□ -0.59
COL6A3-207ENST00000433762 OTOGLQ3ZCN5 2332 aa11.34□□□□□ -0.59
COL6A3-207ENST00000433762 PROP1O75360 226 aa11.33□□□□□ -0.6
COL6A3-207ENST00000433762 IGHV3-13P01766 116 aa11.33□□□□□ -0.6
COL6A3-207ENST00000433762 LOXL3P58215 753 aa11.33□□□□□ -0.6
COL6A3-207ENST00000433762 SSX2Q16385 188 aa11.33□□□□□ -0.6
COL6A3-207ENST00000433762 ACTL10Q5JWF8 245 aa11.33□□□□□ -0.6
COL6A3-207ENST00000433762 FAM180AQ6UWF9 173 aa11.33□□□□□ -0.6
COL6A3-207ENST00000433762 DDB2Q92466 427 aa11.33□□□□□ -0.6
COL6A3-207ENST00000433762 ADTRPQ96IZ2 230 aa11.33□□□□□ -0.6
COL6A3-207ENST00000433762 UFSP2Q9NUQ7 469 aa11.33□□□□□ -0.6
COL6A3-207ENST00000433762 GNG12Q9UBI6 72 aa11.33□□□□□ -0.6
COL6A3-207ENST00000433762 FAM186AA6NE01 2351 aa11.33□□□□□ -0.6
COL6A3-207ENST00000433762 IGKV1D-17A0A075B6S4 117 aa11.33□□□□□ -0.6
COL6A3-207ENST00000433762 MBD3L4A6NDZ8 208 aaPredicted RBP11.33□□□□□ -0.6
COL6A3-207ENST00000433762 MBD3L3A6NE82 208 aaPredicted RBP11.33□□□□□ -0.6
COL6A3-207ENST00000433762 MBD3L5A6NJ08 208 aaPredicted RBP11.33□□□□□ -0.6
COL6A3-207ENST00000433762 TNFSF13O75888 250 aa11.33□□□□□ -0.6
COL6A3-207ENST00000433762 CGB3P0DN86 165 aa11.33□□□□□ -0.6
COL6A3-207ENST00000433762 CGB7P0DN87 165 aa11.33□□□□□ -0.6
COL6A3-207ENST00000433762 GATA4P43694 442 aa11.33□□□□□ -0.6
COL6A3-207ENST00000433762 FABP6P51161 128 aa11.33□□□□□ -0.6
COL6A3-207ENST00000433762 ATP5IP56385 69 aaPredicted RBP11.33□□□□□ -0.6
COL6A3-207ENST00000433762 PKIAP61925 76 aa11.33□□□□□ -0.6
COL6A3-207ENST00000433762 RELBQ01201 579 aa11.33□□□□□ -0.6
COL6A3-207ENST00000433762 JOSD1Q15040 202 aaPredicted RBP11.33□□□□□ -0.6
COL6A3-207ENST00000433762 TRIP6Q15654 476 aaKnown RBP11.33□□□□□ -0.6
COL6A3-207ENST00000433762 GFI1BQ5VTD9 330 aa11.33□□□□□ -0.6
COL6A3-207ENST00000433762 PIP4P1Q86T03 277 aa11.33□□□□□ -0.6
COL6A3-207ENST00000433762 OR4S2Q8NH73 311 aa11.33□□□□□ -0.6
COL6A3-207ENST00000433762 MBD3L2Q8NHZ7 208 aaPredicted RBP11.33□□□□□ -0.6
COL6A3-207ENST00000433762 MSL2Q9HCI7 577 aa11.33□□□□□ -0.6
COL6A3-207ENST00000433762 TRAV9-1A0A075B6T8 112 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 A0A1W2PPV4 95 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 CXorf1O96002 111 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 STAG3L2P0CL84 134 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 STAG3L3P0CL85 134 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 FABP4P15090 132 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 PAX1P15863 534 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 POU2AF1Q16633 256 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 TREML4Q6UXN2 200 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 FDCSPQ8NFU4 85 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 S1PR3Q99500 378 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 SFXN3Q9BWM7 321 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 IFI27L2Q9H2X8 130 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 DKK4Q9UBT3 224 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 DOCK11Q5JSL3 2073 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 IGHV3-43A0A0B4J1X8 118 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 IGHV3-64DA0A0J9YX35 117 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 GFRA3O60609 400 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 FCGR3BO75015 233 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 LHBP01229 141 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 IGHV3-43DP0DP04 118 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 TLE1Q04724 770 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 FOXL1Q12952 345 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 FAM53AQ6NSI3 398 aaPredicted RBP11.32□□□□□ -0.6
COL6A3-207ENST00000433762 LINC01551Q86U37 167 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 FAM222BQ8WU58 562 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 STARD4Q96DR4 205 aa11.32□□□□□ -0.6
COL6A3-207ENST00000433762 LSM4Q9Y4Z0 139 aaKnown RBP11.32□□□□□ -0.6
COL6A3-207ENST00000433762 PCNX2A6NKB5 2137 aa11.31□□□□□ -0.6
COL6A3-207ENST00000433762 CEACAM4O75871 244 aa11.31□□□□□ -0.6
COL6A3-207ENST00000433762 GCGP01275 180 aa11.31□□□□□ -0.6
COL6A3-207ENST00000433762 RFESDQ8TAC1 157 aa11.31□□□□□ -0.6
COL6A3-207ENST00000433762 FOXA2Q9Y261 457 aaPredicted RBP11.31□□□□□ -0.6
COL6A3-207ENST00000433762 LY96Q9Y6Y9 160 aa11.31□□□□□ -0.6
COL6A3-207ENST00000433762 CUL9Q8IWT3 2517 aa11.31□□□□□ -0.6
COL6A3-207ENST00000433762 DIDO1Q9BTC0 2240 aaKnown RBP11.31□□□□□ -0.6
COL6A3-207ENST00000433762 CACNA1DQ01668 2161 aa11.31□□□□□ -0.6
COL6A3-207ENST00000433762 C15orf61A6NNL5 157 aa11.31□□□□□ -0.6
COL6A3-207ENST00000433762 TSTD3H0UI37 97 aa11.31□□□□□ -0.6
COL6A3-207ENST00000433762 M0R1X1 148 aa11.31□□□□□ -0.6
COL6A3-207ENST00000433762 EGR1P18146 543 aa11.31□□□□□ -0.6
COL6A3-207ENST00000433762 GLRXP35754 106 aa11.31□□□□□ -0.6
COL6A3-207ENST00000433762 THBS3P49746 956 aa11.31□□□□□ -0.6
COL6A3-207ENST00000433762 CCL11P51671 97 aa11.31□□□□□ -0.6
COL6A3-207ENST00000433762 TIMM23BQ5SRD1 257 aa11.31□□□□□ -0.6
COL6A3-207ENST00000433762 TMEM144Q7Z5S9 345 aa11.31□□□□□ -0.6
COL6A3-207ENST00000433762 CORO2AQ92828 525 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms