RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 RASL11BQ9BPW5 248 aa8.79□□□□□ -1
CHD4-202ENST00000430771 TMEM222Q9H0R3 208 aa8.79□□□□□ -1
CHD4-202ENST00000430771 FLVCR2Q9UPI3 526 aa8.79□□□□□ -1
CHD4-202ENST00000430771 SETD2Q9BYW2 2564 aaPredicted RBP8.78□□□□□ -1
CHD4-202ENST00000430771 MARCH11A6NNE9 402 aa8.78□□□□□ -1
CHD4-202ENST00000430771 RRHO14718 337 aa8.78□□□□□ -1
CHD4-202ENST00000430771 PRAF2O60831 178 aa8.78□□□□□ -1
CHD4-202ENST00000430771 SFT2D2O95562 160 aa8.78□□□□□ -1
CHD4-202ENST00000430771 CRYBA1P05813 215 aa8.78□□□□□ -1
CHD4-202ENST00000430771 OR4E1P0C645 316 aa8.78□□□□□ -1
CHD4-202ENST00000430771 SAA1P0DJI8 122 aaPredicted RBP8.78□□□□□ -1
CHD4-202ENST00000430771 VSIG10L2P0DP72 767 aa8.78□□□□□ -1
CHD4-202ENST00000430771 ANXA7P20073 488 aaKnown RBP8.78□□□□□ -1
CHD4-202ENST00000430771 LPAR6P43657 344 aa8.78□□□□□ -1
CHD4-202ENST00000430771 MECP2P51608 486 aaKnown RBP8.78□□□□□ -1
CHD4-202ENST00000430771 RAG2P55895 527 aa8.78□□□□□ -1
CHD4-202ENST00000430771 UBE2KP61086 200 aa8.78□□□□□ -1
CHD4-202ENST00000430771 POU2AF1Q16633 256 aa8.78□□□□□ -1
CHD4-202ENST00000430771 FBLN7Q53RD9 439 aa8.78□□□□□ -1
CHD4-202ENST00000430771 CCBE1Q6UXH8 406 aaPredicted RBP8.78□□□□□ -1
CHD4-202ENST00000430771 LYG2Q86SG7 212 aa8.78□□□□□ -1
CHD4-202ENST00000430771 FAM71E2Q8N5Q1 922 aa8.78□□□□□ -1
CHD4-202ENST00000430771 C5orf56Q8N8D9 126 aa8.78□□□□□ -1
CHD4-202ENST00000430771 MINDY2Q8NBR6 621 aa8.78□□□□□ -1
CHD4-202ENST00000430771 DMBX1Q8NFW5 382 aa8.78□□□□□ -1
CHD4-202ENST00000430771 RNASE11Q8TAA1 199 aaKnown RBP8.78□□□□□ -1
CHD4-202ENST00000430771 IL22RA2Q969J5 263 aa8.78□□□□□ -1
CHD4-202ENST00000430771 ALX4Q9H161 411 aaPredicted RBP8.78□□□□□ -1
CHD4-202ENST00000430771 METTL1Q9UBP6 276 aaKnown RBP8.78□□□□□ -1
CHD4-202ENST00000430771 NIPBLQ6KC79 2804 aaeCLIP8.77□□□□□ -1
CHD4-202ENST00000430771 DUXBA0A1W2PPF3 345 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 INMT-MINDY4F8WBC2 141 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 SLC25A17O43808 307 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 KBTBD11O94819 623 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 DHFRP00374 187 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 IGLV2-23P01705 113 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 CNTFRP26992 372 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 RAB25P57735 213 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 BRWD1-AS2P59051 145 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 SUPT4H1P63272 117 aaKnown RBP8.77□□□□□ -1.01
CHD4-202ENST00000430771 DHRS2Q13268 280 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 TMEM187Q14656 261 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 PSG5Q15238 335 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 C5orf64Q2M2E5 130 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 SP6Q3SY56 376 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 ZNF585BQ52M93 769 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 ZNF695Q8IW36 515 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 LGI3Q8N145 548 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 Q8N9W7 124 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 TEX45Q8NA69 505 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 OR4A5Q8NH83 315 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 COQ8AQ8NI60 647 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 CASTOR1Q8WTX7 329 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 RBPMSQ93062 196 aaKnown RBP8.77□□□□□ -1.01
CHD4-202ENST00000430771 RHOVQ96L33 236 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 FBXL15Q9H469 300 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 GPN1Q9HCN4 374 aaPredicted RBP8.77□□□□□ -1.01
CHD4-202ENST00000430771 TMEM140Q9NV12 185 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 BET1LQ9NYM9 111 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 ZFHX3Q15911 3703 aa8.77□□□□□ -1.01
CHD4-202ENST00000430771 C9orf170A2RU37 121 aa8.76□□□□□ -1.01
CHD4-202ENST00000430771 FAM181BA6NEQ2 426 aa8.76□□□□□ -1.01
CHD4-202ENST00000430771 KCNAB3O43448 404 aa8.76□□□□□ -1.01
CHD4-202ENST00000430771 OR2A4O95047 310 aa8.76□□□□□ -1.01
CHD4-202ENST00000430771 CDS2O95674 445 aa8.76□□□□□ -1.01
CHD4-202ENST00000430771 HLA-DRB1P01911 266 aa8.76□□□□□ -1.01
CHD4-202ENST00000430771 F2RL1P55085 397 aa8.76□□□□□ -1.01
CHD4-202ENST00000430771 ARSJQ5FYB0 599 aaPredicted RBP8.76□□□□□ -1.01
CHD4-202ENST00000430771 TMEM268Q5VZI3 342 aa8.76□□□□□ -1.01
CHD4-202ENST00000430771 OR4A47Q6IF82 309 aa8.76□□□□□ -1.01
CHD4-202ENST00000430771 SSX9Q7RTT3 188 aa8.76□□□□□ -1.01
CHD4-202ENST00000430771 FAM219AQ8IW50 185 aa8.76□□□□□ -1.01
CHD4-202ENST00000430771 MMD2Q8IY49 270 aa8.76□□□□□ -1.01
CHD4-202ENST00000430771 PUSL1Q8N0Z8 303 aaKnown RBP8.76□□□□□ -1.01
CHD4-202ENST00000430771 CADM3Q8N126 398 aa8.76□□□□□ -1.01
CHD4-202ENST00000430771 GLYATL2Q8WU03 294 aa8.76□□□□□ -1.01
CHD4-202ENST00000430771 RRNAD1Q96FB5 475 aaKnown RBP8.76□□□□□ -1.01
CHD4-202ENST00000430771 TMEM56Q96MV1 263 aa8.76□□□□□ -1.01
CHD4-202ENST00000430771 OR2A7Q96R45 310 aa8.76□□□□□ -1.01
CHD4-202ENST00000430771 PHB2Q99623 299 aa8.76□□□□□ -1.01
CHD4-202ENST00000430771 MARVELD1Q9BSK0 173 aa8.76□□□□□ -1.01
CHD4-202ENST00000430771 PRSS22Q9GZN4 317 aa8.76□□□□□ -1.01
CHD4-202ENST00000430771 BEX1Q9HBH7 125 aa8.76□□□□□ -1.01
CHD4-202ENST00000430771 TMEM56-RWDD3S4R434 201 aa8.76□□□□□ -1.01
CHD4-202ENST00000430771 NF1P21359 2839 aa8.76□□□□□ -1.01
CHD4-202ENST00000430771 A0A0B4J2A0 478 aa8.75□□□□□ -1.01
CHD4-202ENST00000430771 SRRM4A7MD48 611 aaKnown RBP8.75□□□□□ -1.01
CHD4-202ENST00000430771 ACTL6BO94805 426 aa8.75□□□□□ -1.01
CHD4-202ENST00000430771 DUS4LO95620 317 aaKnown RBP8.75□□□□□ -1.01
CHD4-202ENST00000430771 CA2P00918 260 aa8.75□□□□□ -1.01
CHD4-202ENST00000430771 KRASP01116 189 aa8.75□□□□□ -1.01
CHD4-202ENST00000430771 IL5P05113 134 aa8.75□□□□□ -1.01
CHD4-202ENST00000430771 FGF2P09038 288 aa8.75□□□□□ -1.01
CHD4-202ENST00000430771 G6PCP35575 357 aa8.75□□□□□ -1.01
CHD4-202ENST00000430771 C9orf152Q5JTZ5 239 aa8.75□□□□□ -1.01
CHD4-202ENST00000430771 LIN54Q6MZP7 749 aa8.75□□□□□ -1.01
CHD4-202ENST00000430771 H2BFWTQ7Z2G1 175 aa8.75□□□□□ -1.01
CHD4-202ENST00000430771 PPP1R27Q86WC6 154 aa8.75□□□□□ -1.01
CHD4-202ENST00000430771 VKORC1L1Q8N0U8 176 aa8.75□□□□□ -1.01
CHD4-202ENST00000430771 SLC35G3Q8N808 338 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms