RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 DEFA4P12838 97 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 GZMHP20718 246 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 BSPH1Q075Z2 132 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 TFF3Q07654 80 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 MSMO1Q15800 293 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 ACSM6Q6P461 480 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 GFRALQ6UXV0 394 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 ZFP82Q8N141 532 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 CYB561D1Q8N8Q1 229 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 SCGB1C1Q8TD33 95 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 DTD1Q8TEA8 209 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 TAF15Q92804 592 aaKnown RBP eCLIP11.51□□□□□ -0.575e-6■□□□□ 8.5
RBM39-212ENST00000429968 RCC1LQ96I51 464 aaKnown RBP11.51□□□□□ -0.57
RBM39-212ENST00000429968 EAF1Q96JC9 268 aaPredicted RBP11.51□□□□□ -0.57
RBM39-212ENST00000429968 YPEL2Q96QA6 119 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 RNF7Q9UBF6 113 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 A0A1W2PPE2 198 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 PRRG2O14669 202 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 GNG10P50151 68 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 RAB4BP61018 213 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 RAB2AP61019 212 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 HBG1P69891 147 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 HBG2P69892 147 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 CT45A1Q5HYN5 189 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 TRAT1Q6PIZ9 186 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 MRGPRGQ86SM5 289 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 CT45A3Q8NHU0 189 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 C2CD4CQ8TF44 421 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 PUS1Q9Y606 427 aaKnown RBP eCLIP11.51□□□□□ -0.57
RBM39-212ENST00000429968 TNCP24821 2201 aa11.51□□□□□ -0.57
RBM39-212ENST00000429968 A0A1W2PN81 502 aa11.5□□□□□ -0.57
RBM39-212ENST00000429968 HMGB3O15347 200 aaKnown RBP11.5□□□□□ -0.57
RBM39-212ENST00000429968 RAB4AP20338 218 aa11.5□□□□□ -0.57
RBM39-212ENST00000429968 CHRNA7P36544 502 aa11.5□□□□□ -0.57
RBM39-212ENST00000429968 ZNF506Q5JVG8 444 aa11.5□□□□□ -0.57
RBM39-212ENST00000429968 ADAM5Q6NVV9 412 aa11.5□□□□□ -0.57
RBM39-212ENST00000429968 EDARADDQ8WWZ3 215 aa11.5□□□□□ -0.57
RBM39-212ENST00000429968 SDSLQ96GA7 329 aa11.5□□□□□ -0.57
RBM39-212ENST00000429968 CITED2Q99967 270 aaPredicted RBP11.5□□□□□ -0.57
RBM39-212ENST00000429968 HIPK2Q9H2X6 1198 aa11.5□□□□□ -0.57
RBM39-212ENST00000429968 SEBOXQ9HB31 216 aaPredicted RBP11.5□□□□□ -0.57
RBM39-212ENST00000429968 C16orf97H3BN30 126 aa11.5□□□□□ -0.57
RBM39-212ENST00000429968 RBMXL2O75526 392 aaKnown RBP11.5□□□□□ -0.57
RBM39-212ENST00000429968 FAM87AP0C7U9 286 aa11.5□□□□□ -0.57
RBM39-212ENST00000429968 TLE1Q04724 770 aa11.5□□□□□ -0.57
RBM39-212ENST00000429968 TLE4Q04727 773 aa11.5□□□□□ -0.57
RBM39-212ENST00000429968 SOHLH1Q5JUK2 328 aa11.5□□□□□ -0.57
RBM39-212ENST00000429968 RPP25LQ8N5L8 163 aaKnown RBP11.5□□□□□ -0.57
RBM39-212ENST00000429968 NUP37Q8NFH4 326 aa11.5□□□□□ -0.57
RBM39-212ENST00000429968 DDB2Q92466 427 aa11.5□□□□□ -0.57
RBM39-212ENST00000429968 HIST1H2BAQ96A08 127 aa11.5□□□□□ -0.57
RBM39-212ENST00000429968 ZNF251Q9BRH9 671 aa11.5□□□□□ -0.57
RBM39-212ENST00000429968 PSMG3Q9BT73 122 aaPredicted RBP11.5□□□□□ -0.57
RBM39-212ENST00000429968 SMCO4Q9NRQ5 59 aa11.5□□□□□ -0.57
RBM39-212ENST00000429968 GNG13Q9P2W3 67 aa11.5□□□□□ -0.57
RBM39-212ENST00000429968 SAA2-SAA4A0A096LPE2 208 aa11.49□□□□□ -0.57
RBM39-212ENST00000429968 LOC102723971A0A1B0GUV8 181 aa11.49□□□□□ -0.57
RBM39-212ENST00000429968 C15orf62A8K5M9 175 aa11.49□□□□□ -0.57
RBM39-212ENST00000429968 OR4A8P0C604 315 aa11.49□□□□□ -0.57
RBM39-212ENST00000429968 SAA2P0DJI9 122 aaPredicted RBP11.49□□□□□ -0.57
RBM39-212ENST00000429968 RPS23P62266 143 aaKnown RBP11.49□□□□□ -0.57
RBM39-212ENST00000429968 ZNF561Q8N587 486 aa11.49□□□□□ -0.57
RBM39-212ENST00000429968 NEUROG1Q92886 237 aa11.49□□□□□ -0.57
RBM39-212ENST00000429968 COL25A1Q9BXS0 654 aaPredicted RBP11.49□□□□□ -0.57
RBM39-212ENST00000429968 GFOD1Q9NXC2 390 aa11.49□□□□□ -0.57
RBM39-212ENST00000429968 JKAMPQ9P055 326 aa11.49□□□□□ -0.57
RBM39-212ENST00000429968 MLXQ9UH92 298 aa11.49□□□□□ -0.57
RBM39-212ENST00000429968 ZNF835Q9Y2P0 537 aa11.49□□□□□ -0.57
RBM39-212ENST00000429968 BTBD17A6NE02 478 aa11.48□□□□□ -0.57
RBM39-212ENST00000429968 ZFP92A6NM28 416 aa11.48□□□□□ -0.57
RBM39-212ENST00000429968 CEBPZOSA8MTT3 80 aa11.48□□□□□ -0.57
RBM39-212ENST00000429968 OR8U8P0C7N1 319 aa11.48□□□□□ -0.57
RBM39-212ENST00000429968 MYOD1P15172 320 aa11.48□□□□□ -0.57
RBM39-212ENST00000429968 G0S2P27469 103 aa11.48□□□□□ -0.57
RBM39-212ENST00000429968 ZNF787Q6DD87 383 aa11.48□□□□□ -0.57
RBM39-212ENST00000429968 DPPA3Q6W0C5 159 aa11.48□□□□□ -0.57
RBM39-212ENST00000429968 ZNF788Q6ZQV5 615 aa11.48□□□□□ -0.57
RBM39-212ENST00000429968 Q8N7P7 452 aa11.48□□□□□ -0.57
RBM39-212ENST00000429968 PPP1R35Q8TAP8 253 aa11.48□□□□□ -0.57
RBM39-212ENST00000429968 TACC2O95359 2948 aa11.48□□□□□ -0.57
RBM39-212ENST00000429968 TRAV1-1A0A0B4J248 108 aa11.48□□□□□ -0.57
RBM39-212ENST00000429968 KBTBD11-OT1A0A1B0GTJ5 212 aa11.48□□□□□ -0.57
RBM39-212ENST00000429968 H3BQ15 152 aa11.48□□□□□ -0.57
RBM39-212ENST00000429968 COL8A2P25067 703 aa11.48□□□□□ -0.57
RBM39-212ENST00000429968 TMEM108Q6UXF1 575 aa11.48□□□□□ -0.57
RBM39-212ENST00000429968 TCTEX1D1Q8N7M0 179 aa11.48□□□□□ -0.57
RBM39-212ENST00000429968 ZNF439Q8NDP4 499 aa11.48□□□□□ -0.57
RBM39-212ENST00000429968 TMEM170AQ8WVE7 144 aa11.48□□□□□ -0.57
RBM39-212ENST00000429968 OR6C3Q9NZP0 311 aa11.48□□□□□ -0.57
RBM39-212ENST00000429968 hCG_1809904A0A1W2PP81 198 aa11.47□□□□□ -0.57
RBM39-212ENST00000429968 A0A1W2PR64 198 aa11.47□□□□□ -0.57
RBM39-212ENST00000429968 A0A1W2PRV1 198 aa11.47□□□□□ -0.57
RBM39-212ENST00000429968 A4D1N5 150 aa11.47□□□□□ -0.57
RBM39-212ENST00000429968 ZNF727A8MUV8 499 aa11.47□□□□□ -0.57
RBM39-212ENST00000429968 K7ENP7 123 aa11.47□□□□□ -0.57
RBM39-212ENST00000429968 TMEM41BQ5BJD5 291 aa11.47□□□□□ -0.57
RBM39-212ENST00000429968 PRAMEF5Q5TYX0 476 aa11.47□□□□□ -0.57
RBM39-212ENST00000429968 KDF1Q8NAX2 398 aaPredicted RBP11.47□□□□□ -0.57
RBM39-212ENST00000429968 MBD3L1Q8WWY6 194 aa11.47□□□□□ -0.57
RBM39-212ENST00000429968 PARD6GQ9BYG4 376 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms