RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 VSTM5A8MXK1 200 aa13.35□□□□□ -0.27
MBD4-203ENST00000429544 EIF3GO75821 320 aaKnown RBP eCLIP13.35□□□□□ -0.27
MBD4-203ENST00000429544 AARDQ4LEZ3 155 aa13.35□□□□□ -0.27
MBD4-203ENST00000429544 CLCC1Q96S66 551 aa13.35□□□□□ -0.27
MBD4-203ENST00000429544 PUS1Q9Y606 427 aaKnown RBP eCLIP13.35□□□□□ -0.27
MBD4-203ENST00000429544 LOC102723971A0A1B0GUV8 181 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 E7EQL1 145 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 TMEM178BH3BS89 294 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 DAOP14920 347 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 PLA2G5P39877 138 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 THBS3P49746 956 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 ERVFRD-1P60508 538 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 SPCS3P61009 180 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 RELBQ01201 579 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 NCMAPQ5T1S8 102 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 C1orf87Q8N0U7 546 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 ZNF383Q8NA42 475 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 KDF1Q8NAX2 398 aaPredicted RBP13.34□□□□□ -0.27
MBD4-203ENST00000429544 MBD3L1Q8WWY6 194 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 CCL17Q92583 94 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 LINC00574Q9H8X3 128 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 DYNLRB1Q9NP97 96 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 ZNRD1Q9P1U0 126 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 RPUSD1Q9UJJ7 312 aaKnown RBP13.34□□□□□ -0.27
MBD4-203ENST00000429544 POLEQ07864 2286 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 PPIAL4EA0A075B759 164 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 PPIAL4DF5H284 164 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 PPIAL4FP0DN26 164 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 ACSM6Q6P461 480 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 CYB561D1Q8N8Q1 229 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 RNASE6Q93091 150 aaKnown RBP13.34□□□□□ -0.27
MBD4-203ENST00000429544 PPIAL4AQ9Y536 164 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 LINC00312Q9Y6C7 94 aa13.34□□□□□ -0.27
MBD4-203ENST00000429544 SMG1Q96Q15 3661 aaKnown RBP13.34□□□□□ -0.27
MBD4-203ENST00000429544 ADGRG4Q8IZF6 3080 aa13.33□□□□□ -0.28
MBD4-203ENST00000429544 ZFP92A6NM28 416 aa13.33□□□□□ -0.28
MBD4-203ENST00000429544 IGKV1D-33P01593 117 aa13.33□□□□□ -0.28
MBD4-203ENST00000429544 IGKV1-33P01594 117 aa13.33□□□□□ -0.28
MBD4-203ENST00000429544 HSPB1P04792 205 aaKnown RBP13.33□□□□□ -0.28
MBD4-203ENST00000429544 IGF2RP11717 2491 aa13.33□□□□□ -0.28
MBD4-203ENST00000429544 MAP1LC3B2A6NCE7 125 aa13.33□□□□□ -0.28
MBD4-203ENST00000429544 FCN3O75636 299 aa13.33□□□□□ -0.28
MBD4-203ENST00000429544 UCNP55089 124 aa13.33□□□□□ -0.28
MBD4-203ENST00000429544 GNB2P62879 340 aa13.33□□□□□ -0.28
MBD4-203ENST00000429544 RPL31P62899 125 aaKnown RBP13.33□□□□□ -0.28
MBD4-203ENST00000429544 KHDC3LQ587J8 217 aa13.33□□□□□ -0.28
MBD4-203ENST00000429544 CENPVQ7Z7K6 275 aaPredicted RBP13.33□□□□□ -0.28
MBD4-203ENST00000429544 MAP1LC3BQ9GZQ8 125 aa13.33□□□□□ -0.28
MBD4-203ENST00000429544 HEYLQ9NQ87 328 aaPredicted RBP13.33□□□□□ -0.28
MBD4-203ENST00000429544 TMEM106BQ9NUM4 274 aa13.33□□□□□ -0.28
MBD4-203ENST00000429544 FAM90A27PA6NNH2 459 aa13.32□□□□□ -0.28
MBD4-203ENST00000429544 COLCA2A8K830 154 aa13.32□□□□□ -0.28
MBD4-203ENST00000429544 IFNA10P01566 189 aa13.32□□□□□ -0.28
MBD4-203ENST00000429544 ARG1P05089 322 aa13.32□□□□□ -0.28
MBD4-203ENST00000429544 CASP6P55212 293 aa13.32□□□□□ -0.28
MBD4-203ENST00000429544 VWC2Q2TAL6 325 aa13.32□□□□□ -0.28
MBD4-203ENST00000429544 TMEM30BQ3MIR4 351 aa13.32□□□□□ -0.28
MBD4-203ENST00000429544 FAM122CQ6P4D5 195 aa13.32□□□□□ -0.28
MBD4-203ENST00000429544 SLC25A48Q6ZT89 311 aaKnown RBP13.32□□□□□ -0.28
MBD4-203ENST00000429544 ADTRPQ96IZ2 230 aa13.32□□□□□ -0.28
MBD4-203ENST00000429544 MLXQ9UH92 298 aa13.32□□□□□ -0.28
MBD4-203ENST00000429544 CCL3L1P16619 93 aa13.32□□□□□ -0.28
MBD4-203ENST00000429544 RHEBQ15382 184 aa13.32□□□□□ -0.28
MBD4-203ENST00000429544 LYPD2Q6UXB3 125 aa13.32□□□□□ -0.28
MBD4-203ENST00000429544 ZCCHC14Q8WYQ9 949 aaKnown RBP13.32□□□□□ -0.28
MBD4-203ENST00000429544 H1FXQ92522 213 aaKnown RBP13.32□□□□□ -0.28
MBD4-203ENST00000429544 RHOVQ96L33 236 aa13.32□□□□□ -0.28
MBD4-203ENST00000429544 NPCDR1Q9BY65 106 aa13.32□□□□□ -0.28
MBD4-203ENST00000429544 GAL3ST2Q9H3Q3 398 aa13.32□□□□□ -0.28
MBD4-203ENST00000429544 UNKLQ9H9P5 680 aaKnown RBP13.32□□□□□ -0.28
MBD4-203ENST00000429544 BCL2P10415 239 aa13.31□□□□□ -0.28
MBD4-203ENST00000429544 VDAC2P45880 294 aaPredicted RBP13.31□□□□□ -0.28
MBD4-203ENST00000429544 FLI1Q01543 452 aaPredicted RBP13.31□□□□□ -0.28
MBD4-203ENST00000429544 FFAR4Q5NUL3 377 aa13.31□□□□□ -0.28
MBD4-203ENST00000429544 ARFGEF3Q5TH69 2177 aa13.31□□□□□ -0.28
MBD4-203ENST00000429544 RPP25LQ8N5L8 163 aaKnown RBP13.31□□□□□ -0.28
MBD4-203ENST00000429544 OR52E5Q8NH55 327 aa13.31□□□□□ -0.28
MBD4-203ENST00000429544 SLC25A22Q9H936 323 aa13.31□□□□□ -0.28
MBD4-203ENST00000429544 TCF19Q9Y242 345 aa13.31□□□□□ -0.28
MBD4-203ENST00000429544 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.31□□□□□ -0.28
MBD4-203ENST00000429544 CD3EP07766 207 aa13.31□□□□□ -0.28
MBD4-203ENST00000429544 HOXA1P49639 335 aaPredicted RBP13.31□□□□□ -0.28
MBD4-203ENST00000429544 MEF2CQ06413 473 aaPredicted RBP13.31□□□□□ -0.28
MBD4-203ENST00000429544 OR4A47Q6IF82 309 aa13.31□□□□□ -0.28
MBD4-203ENST00000429544 C15orf54Q8N8G6 183 aa13.31□□□□□ -0.28
MBD4-203ENST00000429544 ISOC2Q96AB3 205 aa13.31□□□□□ -0.28
MBD4-203ENST00000429544 SLC39A9Q9NUM3 307 aa13.31□□□□□ -0.28
MBD4-203ENST00000429544 KALRNO60229 2985 aa13.3□□□□□ -0.28
MBD4-203ENST00000429544 C15orf61A6NNL5 157 aa13.3□□□□□ -0.28
MBD4-203ENST00000429544 H3BQ15 152 aa13.3□□□□□ -0.28
MBD4-203ENST00000429544 PLAUP00749 431 aa13.3□□□□□ -0.28
MBD4-203ENST00000429544 CRYBA1P05813 215 aa13.3□□□□□ -0.28
MBD4-203ENST00000429544 CA7P43166 264 aa13.3□□□□□ -0.28
MBD4-203ENST00000429544 RPP30P78346 268 aaKnown RBP13.3□□□□□ -0.28
MBD4-203ENST00000429544 AVPI1Q5T686 147 aa13.3□□□□□ -0.28
MBD4-203ENST00000429544 ZNF429Q86V71 674 aa13.3□□□□□ -0.28
MBD4-203ENST00000429544 ZNF709Q8N972 641 aa13.3□□□□□ -0.28
MBD4-203ENST00000429544 LINC01560Q8TB33 94 aa13.3□□□□□ -0.28
MBD4-203ENST00000429544 ZNF714Q96N38 554 aa13.3□□□□□ -0.28
MBD4-203ENST00000429544 CISD1Q9NZ45 108 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms