RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 MARCH11A6NNE9 402 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 PMCHP20382 165 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 FXYD3Q14802 87 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 ZNF497Q6ZNH5 498 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 ERASQ7Z444 233 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 ZNRF1Q8ND25 227 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 OR8G5Q8NG78 346 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 INTS1Q8N201 2190 aaKnown RBP10.44□□□□□ -0.74
CDH3-202ENST00000429102 ABCA4P78363 2273 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 WNK2Q9Y3S1 2297 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 C9orf172C9J069 976 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 TGOLN2O43493 480 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 OR9G9P0C7N8 305 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 CCL11P51671 97 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 CNN1P51911 297 aaKnown RBP10.44□□□□□ -0.74
CDH3-202ENST00000429102 ATOH7Q8N100 152 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 R3HDM4Q96D70 268 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 RYDENQ9NUL5 291 aaKnown RBP10.44□□□□□ -0.74
CDH3-202ENST00000429102 POLDIP2Q9Y2S7 368 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 TMEM30CPA0ZSE6 113 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 FAM90A10PA6NDY2 464 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 FAM90A18PA6NE21 464 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 FAM90A16PA6NEW6 464 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 FAM90A20PA6NIJ5 464 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 FAM90A8PA6NJQ4 464 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 FAM90A7PA6NKC0 464 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 FAM90A22PA8MWA6 464 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 FAM90A12PA8MX19 464 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 FAM90A5PA8MXJ8 464 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 FAM90A23PA8MXZ1 464 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 F6UZH7 168 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 RBFOX2O43251 390 aaKnown RBP eCLIP10.44□□□□□ -0.74
CDH3-202ENST00000429102 FAM90A15PP0C7V4 464 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 FAM90A13PP0C7W8 464 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 FAM90A14PP0C7W9 464 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 FAM90A24PP0C7X0 464 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 HOXC12P31275 282 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 GPR12P47775 334 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 GNG10P50151 68 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 RND2P52198 227 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 SRSF6Q13247 344 aaKnown RBP10.44□□□□□ -0.74
CDH3-202ENST00000429102 OR2Z1Q8NG97 314 aa10.44□□□□□ -0.74
CDH3-202ENST00000429102 LSM10Q969L4 123 aaKnown RBP10.44□□□□□ -0.74
CDH3-202ENST00000429102 NTN3O00634 580 aaPredicted RBP10.43□□□□□ -0.74
CDH3-202ENST00000429102 FOXH1O75593 365 aa10.43□□□□□ -0.74
CDH3-202ENST00000429102 IER3P46695 156 aa10.43□□□□□ -0.74
CDH3-202ENST00000429102 KRTAP27-1Q3LI81 207 aa10.43□□□□□ -0.74
CDH3-202ENST00000429102 FBXW9Q5XUX1 488 aa10.43□□□□□ -0.74
CDH3-202ENST00000429102 SGK494Q96LW2 274 aa10.43□□□□□ -0.74
CDH3-202ENST00000429102 PSMG3Q9BT73 122 aaPredicted RBP10.43□□□□□ -0.74
CDH3-202ENST00000429102 MANBALQ9NQG1 85 aa10.43□□□□□ -0.74
CDH3-202ENST00000429102 F2Z2F3 143 aa10.43□□□□□ -0.74
CDH3-202ENST00000429102 H0Y8G0 127 aa10.43□□□□□ -0.74
CDH3-202ENST00000429102 OR10J4P0C629 311 aa10.43□□□□□ -0.74
CDH3-202ENST00000429102 MGST1P10620 155 aaKnown RBP10.43□□□□□ -0.74
CDH3-202ENST00000429102 CD1BP29016 333 aa10.43□□□□□ -0.74
CDH3-202ENST00000429102 MRPL49Q13405 166 aaKnown RBP10.43□□□□□ -0.74
CDH3-202ENST00000429102 TMEM164Q5U3C3 297 aa10.43□□□□□ -0.74
CDH3-202ENST00000429102 MOB3BQ86TA1 216 aa10.43□□□□□ -0.74
CDH3-202ENST00000429102 KLF14Q8TD94 323 aaPredicted RBP10.43□□□□□ -0.74
CDH3-202ENST00000429102 CTDSP1Q9GZU7 261 aa10.43□□□□□ -0.74
CDH3-202ENST00000429102 ZNRD1Q9P1U0 126 aa10.43□□□□□ -0.74
CDH3-202ENST00000429102 TRAV1-1A0A0B4J248 108 aa10.43□□□□□ -0.74
CDH3-202ENST00000429102 CER1O95813 267 aa10.43□□□□□ -0.74
CDH3-202ENST00000429102 CD82P27701 267 aa10.43□□□□□ -0.74
CDH3-202ENST00000429102 HOXA6P31267 233 aa10.43□□□□□ -0.74
CDH3-202ENST00000429102 CSMD1Q96PZ7 3565 aa10.42□□□□□ -0.74
CDH3-202ENST00000429102 A8MWP6 167 aa10.42□□□□□ -0.74
CDH3-202ENST00000429102 ACOT6Q3I5F7 207 aaPredicted RBP10.42□□□□□ -0.74
CDH3-202ENST00000429102 TMEM14EPQ6UXP3 125 aa10.42□□□□□ -0.74
CDH3-202ENST00000429102 ZNF645Q8N7E2 425 aa10.42□□□□□ -0.74
CDH3-202ENST00000429102 FAM216AQ8WUB2 273 aa10.42□□□□□ -0.74
CDH3-202ENST00000429102 P2RX4Q99571 388 aa10.42□□□□□ -0.74
CDH3-202ENST00000429102 RPH3ALQ9UNE2 315 aa10.42□□□□□ -0.74
CDH3-202ENST00000429102 TRGV5A0A0B4J1U4 118 aa10.42□□□□□ -0.74
CDH3-202ENST00000429102 RNF212BA8MTL3 300 aa10.42□□□□□ -0.74
CDH3-202ENST00000429102 BRWD1-AS2P59051 145 aa10.42□□□□□ -0.74
CDH3-202ENST00000429102 HTD2P86397 168 aa10.42□□□□□ -0.74
CDH3-202ENST00000429102 SAXO1Q8IYX7 474 aa10.42□□□□□ -0.74
CDH3-202ENST00000429102 OR4P4Q8NGL7 312 aa10.42□□□□□ -0.74
CDH3-202ENST00000429102 OR6C3Q9NZP0 311 aa10.42□□□□□ -0.74
CDH3-202ENST00000429102 SMPD2O60906 423 aa10.41□□□□□ -0.74
CDH3-202ENST00000429102 CLDN14O95500 239 aa10.41□□□□□ -0.74
CDH3-202ENST00000429102 IQCJQ1A5X6 159 aa10.41□□□□□ -0.74
CDH3-202ENST00000429102 HLA-DRB5Q30154 266 aa10.41□□□□□ -0.74
CDH3-202ENST00000429102 DBX2Q6ZNG2 339 aa10.41□□□□□ -0.74
CDH3-202ENST00000429102 LRRC29Q8WV35 223 aa10.41□□□□□ -0.74
CDH3-202ENST00000429102 NANOS1Q8WY41 292 aaKnown RBP10.41□□□□□ -0.74
CDH3-202ENST00000429102 STRADBQ9C0K7 418 aa10.41□□□□□ -0.74
CDH3-202ENST00000429102 COL5A1P20908 1838 aaPredicted RBP10.41□□□□□ -0.74
CDH3-202ENST00000429102 TNFSF15O95150 251 aa10.41□□□□□ -0.74
CDH3-202ENST00000429102 ADMP35318 185 aa10.41□□□□□ -0.74
CDH3-202ENST00000429102 MLANAQ16655 118 aa10.41□□□□□ -0.74
CDH3-202ENST00000429102 LINC01551Q86U37 167 aa10.41□□□□□ -0.74
CDH3-202ENST00000429102 OCC1Q8TAD7 63 aa10.41□□□□□ -0.74
CDH3-202ENST00000429102 COQ2Q96H96 371 aa10.41□□□□□ -0.74
CDH3-202ENST00000429102 LRFN3Q9BTN0 628 aa10.41□□□□□ -0.74
CDH3-202ENST00000429102 MS4A5Q9H3V2 200 aa10.41□□□□□ -0.74
CDH3-202ENST00000429102 SPRY3O43610 288 aa10.41□□□□□ -0.74
CDH3-202ENST00000429102 APELAP0DMC3 54 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms