RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 S100A10P60903 97 aa10.27□□□□□ -0.77
HMGB3P4-201ENST00000428776 ID3Q02535 119 aa10.27□□□□□ -0.77
HMGB3P4-201ENST00000428776 LDLRAD2Q5SZI1 272 aa10.27□□□□□ -0.77
HMGB3P4-201ENST00000428776 LHFPL4Q7Z7J7 247 aa10.27□□□□□ -0.77
HMGB3P4-201ENST00000428776 ZNF546Q86UE3 836 aa10.27□□□□□ -0.77
HMGB3P4-201ENST00000428776 MALSU1Q96EH3 234 aa10.27□□□□□ -0.77
HMGB3P4-201ENST00000428776 RHOVQ96L33 236 aa10.27□□□□□ -0.77
HMGB3P4-201ENST00000428776 RNF126Q9BV68 326 aa10.27□□□□□ -0.77
HMGB3P4-201ENST00000428776 C7orf69Q9H7B7 122 aa10.27□□□□□ -0.77
HMGB3P4-201ENST00000428776 POMT1Q9Y6A1 747 aa10.27□□□□□ -0.77
HMGB3P4-201ENST00000428776 TEX15Q9BXT5 2789 aa10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 FXYD6-FXYD2A0A087WZ82 144 aa10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 A0A1W2PRD5 423 aa10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 A0A1W2PRF3 423 aa10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 A0A1W2PRM7 423 aa10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 FAM90A26D6RGX4 464 aa10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 K7EPK0 472 aa10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 NPFFO15130 113 aa10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 SHOXO15266 292 aa10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 TGFAP01135 160 aa10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 IGHV4-31P0DP07 118 aa10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 CD1BP29016 333 aa10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 LGALS7P47929 136 aa10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 HABP2Q14520 560 aaPredicted RBP10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 IZUMO4Q1ZYL8 232 aa10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 TMEM249Q2WGJ8 235 aa10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 CXorf66Q5JRM2 361 aaPredicted RBP10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 FAM71E2Q8N5Q1 922 aa10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 RNF5Q99942 180 aa10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 MS4A7Q9GZW8 240 aaPredicted RBP10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 TMEM140Q9NV12 185 aa10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 MBD2Q9UBB5 411 aa10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 CACFD1Q9UGQ2 172 aa10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 LSM5Q9Y4Y9 91 aaKnown RBP10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 HILPDAQ9Y5L2 63 aa10.26□□□□□ -0.77
HMGB3P4-201ENST00000428776 ZANQ9Y493 2812 aa10.25□□□□□ -0.77
HMGB3P4-201ENST00000428776 IGHV1-69DA0A0B4J2H0 117 aa10.25□□□□□ -0.77
HMGB3P4-201ENST00000428776 H0YIZ8 118 aa10.25□□□□□ -0.77
HMGB3P4-201ENST00000428776 DEDDO75618 318 aa10.25□□□□□ -0.77
HMGB3P4-201ENST00000428776 IGHV1-69P01742 117 aa10.25□□□□□ -0.77
HMGB3P4-201ENST00000428776 IL6RP08887 468 aaPredicted RBP10.25□□□□□ -0.77
HMGB3P4-201ENST00000428776 RPS16P62249 146 aaKnown RBP10.25□□□□□ -0.77
HMGB3P4-201ENST00000428776 SSX2Q16385 188 aa10.25□□□□□ -0.77
HMGB3P4-201ENST00000428776 AARDQ4LEZ3 155 aa10.25□□□□□ -0.77
HMGB3P4-201ENST00000428776 OR4A47Q6IF82 309 aa10.25□□□□□ -0.77
HMGB3P4-201ENST00000428776 SSX9Q7RTT3 188 aa10.25□□□□□ -0.77
HMGB3P4-201ENST00000428776 FOXRED2Q8IWF2 684 aa10.25□□□□□ -0.77
HMGB3P4-201ENST00000428776 VKORC1L1Q8N0U8 176 aa10.25□□□□□ -0.77
HMGB3P4-201ENST00000428776 C9orf62Q8N4C0 152 aa10.25□□□□□ -0.77
HMGB3P4-201ENST00000428776 MAPK1IP1LQ8NDC0 245 aa10.25□□□□□ -0.77
HMGB3P4-201ENST00000428776 WFDC11Q8NEX6 87 aa10.25□□□□□ -0.77
HMGB3P4-201ENST00000428776 OR4A16Q8NH70 328 aa10.25□□□□□ -0.77
HMGB3P4-201ENST00000428776 GRPEL2Q8TAA5 225 aa10.25□□□□□ -0.77
HMGB3P4-201ENST00000428776 VSTM2AQ8TAG5 236 aa10.25□□□□□ -0.77
HMGB3P4-201ENST00000428776 CFHR4Q92496 578 aa10.25□□□□□ -0.77
HMGB3P4-201ENST00000428776 HARBI1Q96MB7 349 aa10.25□□□□□ -0.77
HMGB3P4-201ENST00000428776 OR5AC2Q9NZP5 309 aa10.25□□□□□ -0.77
HMGB3P4-201ENST00000428776 TNFSF18Q9UNG2 199 aa10.25□□□□□ -0.77
HMGB3P4-201ENST00000428776 CSMD2Q7Z408 3487 aa10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 IGHV3-72A0A0B4J1Y9 119 aa10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 SRRM4A7MD48 611 aaKnown RBP10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 E5RGE8 158 aa10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 WRBO00258 174 aa10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 TIMM23O14925 209 aa10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 ARPC5O15511 151 aa10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 MED6O75586 246 aa10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 OR9G9P0C7N8 305 aa10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 PVALBP20472 110 aaPredicted RBP10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 SAA4P35542 130 aa10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 RELBQ01201 579 aa10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 LGALSLQ3ZCW2 172 aaPredicted RBP10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 GPR157Q5UAW9 335 aa10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 CYB5R2Q6BCY4 276 aa10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 LAMTOR1Q6IAA8 161 aa10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 ZNF429Q86V71 674 aa10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 PUSL1Q8N0Z8 303 aaKnown RBP10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 INO80EQ8NBZ0 244 aaPredicted RBP10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 OR4A5Q8NH83 315 aa10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 DCUN1D4Q92564 292 aa10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 AJUBAQ96IF1 538 aa10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 MFFQ9GZY8 342 aa10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 BET1LQ9NYM9 111 aa10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 HSPB7Q9UBY9 170 aa10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 RCL1Q9Y2P8 373 aaKnown RBP10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 NSG2Q9Y328 171 aa10.24□□□□□ -0.77
HMGB3P4-201ENST00000428776 TRAV40A0A0B4J280 105 aa10.23□□□□□ -0.77
HMGB3P4-201ENST00000428776 L7N2F9 121 aa10.23□□□□□ -0.77
HMGB3P4-201ENST00000428776 UPK2O00526 184 aa10.23□□□□□ -0.77
HMGB3P4-201ENST00000428776 SYNGR2O43760 224 aa10.23□□□□□ -0.77
HMGB3P4-201ENST00000428776 RBMXL2O75526 392 aaKnown RBP10.23□□□□□ -0.77
HMGB3P4-201ENST00000428776 VENTXO95231 258 aa10.23□□□□□ -0.77
HMGB3P4-201ENST00000428776 IGLV2-23P01705 113 aa10.23□□□□□ -0.77
HMGB3P4-201ENST00000428776 C4BPBP20851 252 aa10.23□□□□□ -0.77
HMGB3P4-201ENST00000428776 NUP62P37198 522 aaPredicted RBP10.23□□□□□ -0.77
HMGB3P4-201ENST00000428776 UBE2KP61086 200 aa10.23□□□□□ -0.77
HMGB3P4-201ENST00000428776 POLR2GP62487 172 aaKnown RBP eCLIP10.23□□□□□ -0.77
HMGB3P4-201ENST00000428776 TNFRSF9Q07011 255 aa10.23□□□□□ -0.77
HMGB3P4-201ENST00000428776 VMA21Q3ZAQ7 101 aa10.23□□□□□ -0.77
HMGB3P4-201ENST00000428776 ACOT7LQ6ZUV0 252 aa10.23□□□□□ -0.77
HMGB3P4-201ENST00000428776 DYNAPQ8N1N2 210 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms