RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 LHFPL5Q8TAF8 219 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 OSR1Q8TAX0 266 aaPredicted RBP6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 SSMEM1Q8WWF3 244 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 RBPMSQ93062 196 aaKnown RBP6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 IL22RA2Q969J5 263 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 R3HDM4Q96D70 268 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 RRNAD1Q96FB5 475 aaKnown RBP6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 EAF1Q96JC9 268 aaPredicted RBP6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 ZNF48Q96MX3 618 aaPredicted RBP6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 TSNAXQ99598 290 aaKnown RBP6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 MEGF9Q9H1U4 602 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 FAM212BQ9NTI7 297 aaPredicted RBP6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 COMMD9Q9P000 198 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 HIVEP2P31629 2446 aa6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 NCBP2LA6PVI3 153 aaKnown RBP6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 FAM25EA8MYX2 175 aa6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 GOSR2O14653 212 aa6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 NBR2O15453 112 aa6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 HOXA3O43365 443 aaPredicted RBP6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 SLC25A17O43808 307 aa6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 CDS2O95674 445 aa6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 IFNA21P01568 189 aa6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 IGKV1-5P01602 117 aa6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 HOXB5P09067 269 aa6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 SAA1P0DJI8 122 aaPredicted RBP6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 FBLN7Q53RD9 439 aa6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 THOC7Q6I9Y2 204 aaKnown RBP6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 H2BFWTQ7Z2G1 175 aa6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 SELENOHQ8IZQ5 122 aaKnown RBP6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 OR5R1Q8NH85 324 aa6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 RHOVQ96L33 236 aa6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 TMEM56Q96MV1 263 aa6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 AIFM2Q9BRQ8 373 aa6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 MED28Q9H204 178 aa6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 TMEM140Q9NV12 185 aa6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 KIAA1456Q9P272 454 aa6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 MGAT4CQ9UBM8 478 aa6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 METTL1Q9UBP6 276 aaKnown RBP6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 TCF19Q9Y242 345 aa6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 TMEM56-RWDD3S4R434 201 aa6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 YLPM1P49750 1951 aaKnown RBP6.34□□□□□ -1.39
HMGA1P4-201ENST00000428643 WNK2Q9Y3S1 2297 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 ZNF469Q96JG9 3925 aaPredicted RBP6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 SONP18583 2426 aaKnown RBP6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 A0A0B4J2A0 478 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 C13orf42A0A1B0GVH6 325 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 DUXBA0A1W2PPF3 345 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 FAM90A9PA6NNJ1 464 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 CCSO14618 274 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 RBMXL2O75526 392 aaKnown RBP6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 ADAP1O75689 374 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 SPDEFO95238 335 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 IGKV1-39P01597 117 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 IGKV1D-39P04432 117 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 VDAC1P21796 283 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 CNTFRP26992 372 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 IER3P46695 156 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 LGALS7P47929 136 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 OR2B8PP59922 312 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 UBE2KP61086 200 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 PSG5Q15238 335 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 IZUMO4Q1ZYL8 232 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 GGNBP1Q5YKI7 109 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 OR4A47Q6IF82 309 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 Q6YL49 198 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 LYZL2Q7Z4W2 148 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 THNSL2Q86YJ6 484 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 Q8N6K4 173 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 LRTM2Q8N967 370 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 VSTM2AQ8TAG5 236 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 PIFOQ8TCI5 191 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 ZNF418Q8TF45 676 aaPredicted RBP6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 SEC22AQ96IW7 307 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 RITA1Q96K30 269 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 DUX5Q96PT3 197 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 SPIN2AQ99865 258 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 SPIN2BQ9BPZ2 258 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 SLC25A33Q9BSK2 321 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 FBXL15Q9H469 300 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 RAB18Q9NP72 206 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 TPSG1Q9NRR2 321 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 C1RLQ9NZP8 487 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 CACNG5Q9UF02 275 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 SHPKQ9UHJ6 478 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 PITPNC1Q9UKF7 332 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 VPREB3Q9UKI3 123 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 MOB4Q9Y3A3 225 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 DOCK11Q5JSL3 2073 aa6.33□□□□□ -1.4
HMGA1P4-201ENST00000428643 A0A0G2JRQ6 117 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 A0A1B0GVG6 124 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 C5orf51A6NDU8 294 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 A6NDX4 124 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 DNAJC9-AS1A6NH13 148 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 SRRM4A7MD48 611 aaKnown RBP6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 RRHO14718 337 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 CHST1O43916 411 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 CRLF1O75462 422 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 SNAPC5O75971 98 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 KBTBD11O94819 623 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 OR2F2O95006 317 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms