RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 LHX4Q969G2 390 aa7.36□□□□□ -1.23
NR1I3-209ENST00000428574 RPEQ96AT9 228 aa7.36□□□□□ -1.23
NR1I3-209ENST00000428574 FLYWCH2Q96CP2 140 aaKnown RBP7.36□□□□□ -1.23
NR1I3-209ENST00000428574 PHYHIPLQ96FC7 376 aa7.36□□□□□ -1.23
NR1I3-209ENST00000428574 SLC25A31Q9H0C2 315 aa7.36□□□□□ -1.23
NR1I3-209ENST00000428574 NARFLQ9H6Q4 476 aa7.36□□□□□ -1.23
NR1I3-209ENST00000428574 LYRM2Q9NU23 88 aaPredicted RBP7.36□□□□□ -1.23
NR1I3-209ENST00000428574 PRNDQ9UKY0 176 aa7.36□□□□□ -1.23
NR1I3-209ENST00000428574 FOXA2Q9Y261 457 aaPredicted RBP7.36□□□□□ -1.23
NR1I3-209ENST00000428574 RCL1Q9Y2P8 373 aaKnown RBP7.36□□□□□ -1.23
NR1I3-209ENST00000428574 USP9YO00507 2555 aaPredicted RBP7.35□□□□□ -1.23
NR1I3-209ENST00000428574 IGHV1-3A0A0C4DH29 117 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 A0A0G2JRQ6 117 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 A0A1W2PPE3 182 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 KANTRA0A1W2PQU2 76 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 C15orf61A6NNL5 157 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 INS-IGF2F8WCM5 200 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 BCL2L11O43521 198 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 SYNGR2O43760 224 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 IGHV3-7P01780 117 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 HOXB4P17483 251 aaPredicted RBP7.35□□□□□ -1.23
NR1I3-209ENST00000428574 CXCL2P19875 107 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 RPL12P30050 165 aaKnown RBP7.35□□□□□ -1.23
NR1I3-209ENST00000428574 G6PCP35575 357 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 SPCS3P61009 180 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 RPL23AP62750 156 aaKnown RBP7.35□□□□□ -1.23
NR1I3-209ENST00000428574 C1orf229Q6ZS94 237 aaPredicted RBP7.35□□□□□ -1.23
NR1I3-209ENST00000428574 TMUB2Q71RG4 321 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 ZNF767PQ75MW2 155 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 STPG2Q8N412 459 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 PNKDQ8N490 385 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 DMBX1Q8NFW5 382 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 OR5B3Q8NH48 314 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 MALSU1Q96EH3 234 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 SMIM8Q96KF7 97 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 HARBI1Q96MB7 349 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 TSNAXQ99598 290 aaKnown RBP7.35□□□□□ -1.23
NR1I3-209ENST00000428574 MS4A7Q9GZW8 240 aaPredicted RBP7.35□□□□□ -1.23
NR1I3-209ENST00000428574 ARL6Q9H0F7 186 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 TMEM14BQ9NUH8 114 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 OR5AC2Q9NZP5 309 aa7.35□□□□□ -1.23
NR1I3-209ENST00000428574 SPTAN1Q13813 2472 aaKnown RBP7.34□□□□□ -1.23
NR1I3-209ENST00000428574 A0A1W2PPI3 338 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 FAM157AC9JC47 383 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 RNASEK-C17orf49H0YIS7 233 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 SCGB1D2O95969 90 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 ARG1P05089 322 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 MAS1LP35410 378 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 DYNLT3P51808 116 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 LGALS4P56470 323 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 UBE2KP61086 200 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 UBA52P62987 128 aaKnown RBP7.34□□□□□ -1.23
NR1I3-209ENST00000428574 VAMP2P63027 116 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 RELBQ01201 579 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 OPCMLQ14982 345 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 VMA21Q3ZAQ7 101 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 OR2B11Q5JQS5 317 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 CXorf66Q5JRM2 361 aaPredicted RBP7.34□□□□□ -1.23
NR1I3-209ENST00000428574 OR4A47Q6IF82 309 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 Q6ZRM9 215 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 OR2C3Q8N628 320 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 LINC01356Q8N9X3 169 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 TEX45Q8NA69 505 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 OR4A16Q8NH70 328 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 STOML3Q8TAV4 291 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 TMEM167AQ8TBQ9 72 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 TBX15Q96SF7 602 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 ARPC5LQ9BPX5 153 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 SIRT7Q9NRC8 400 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 TMEM140Q9NV12 185 aa7.34□□□□□ -1.23
NR1I3-209ENST00000428574 LSM5Q9Y4Y9 91 aaKnown RBP7.34□□□□□ -1.23
NR1I3-209ENST00000428574 USF3Q68DE3 2245 aa7.33□□□□□ -1.24
NR1I3-209ENST00000428574 H7C2Y5 167 aa7.33□□□□□ -1.24
NR1I3-209ENST00000428574 SHOXO15266 292 aa7.33□□□□□ -1.24
NR1I3-209ENST00000428574 JTBO76095 146 aa7.33□□□□□ -1.24
NR1I3-209ENST00000428574 KBTBD11O94819 623 aa7.33□□□□□ -1.24
NR1I3-209ENST00000428574 IFNA7P01567 189 aa7.33□□□□□ -1.24
NR1I3-209ENST00000428574 IGKV1-16P04430 117 aa7.33□□□□□ -1.24
NR1I3-209ENST00000428574 HKR1P10072 659 aa7.33□□□□□ -1.24
NR1I3-209ENST00000428574 COX7A1P24310 79 aa7.33□□□□□ -1.24
NR1I3-209ENST00000428574 COL8A1P27658 744 aa7.33□□□□□ -1.24
NR1I3-209ENST00000428574 AP2S1P53680 142 aaPredicted RBP7.33□□□□□ -1.24
NR1I3-209ENST00000428574 POLR2GP62487 172 aaKnown RBP eCLIP7.33□□□□□ -1.24
NR1I3-209ENST00000428574 RPP30P78346 268 aaKnown RBP7.33□□□□□ -1.24
NR1I3-209ENST00000428574 EBI3Q14213 229 aa7.33□□□□□ -1.24
NR1I3-209ENST00000428574 STX12Q86Y82 276 aa7.33□□□□□ -1.24
NR1I3-209ENST00000428574 THNSL2Q86YJ6 484 aa7.33□□□□□ -1.24
NR1I3-209ENST00000428574 MRPL41Q8IXM3 137 aaKnown RBP7.33□□□□□ -1.24
NR1I3-209ENST00000428574 TEX29Q8N6K0 151 aa7.33□□□□□ -1.24
NR1I3-209ENST00000428574 OR8H1Q8NGG4 311 aa7.33□□□□□ -1.24
NR1I3-209ENST00000428574 CLCC1Q96S66 551 aa7.33□□□□□ -1.24
NR1I3-209ENST00000428574 SRSF8Q9BRL6 282 aaKnown RBP7.33□□□□□ -1.24
NR1I3-209ENST00000428574 MMP26Q9NRE1 261 aa7.33□□□□□ -1.24
NR1I3-209ENST00000428574 UPK2O00526 184 aa7.32□□□□□ -1.24
NR1I3-209ENST00000428574 CHST1O43916 411 aa7.32□□□□□ -1.24
NR1I3-209ENST00000428574 SSSCA1O60232 199 aa7.32□□□□□ -1.24
NR1I3-209ENST00000428574 TSPAN9O75954 239 aa7.32□□□□□ -1.24
NR1I3-209ENST00000428574 VENTXO95231 258 aa7.32□□□□□ -1.24
NR1I3-209ENST00000428574 SAA1P0DJI8 122 aaPredicted RBP7.32□□□□□ -1.24
NR1I3-209ENST00000428574 BRS3P32247 399 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms