RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 NPBQ8NG41 125 aa12.32□□□□□ -0.44
COL11A1-204ENST00000427239 GLYATL2Q8WU03 294 aa12.32□□□□□ -0.44
COL11A1-204ENST00000427239 M0QZK8 103 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 CDS2O95674 445 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 OR5AC1P0C628 307 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 ANXA7P20073 488 aaKnown RBP12.31□□□□□ -0.44
COL11A1-204ENST00000427239 UCP1P25874 307 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 LPAR6P43657 344 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 SP6Q3SY56 376 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 C4orf46Q504U0 113 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 RITA1Q96K30 269 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 HARBI1Q96MB7 349 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 CHIAQ9BZP6 476 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 ESM1Q9NQ30 184 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 PLSCR3Q9NRY6 295 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 TNFRSF19Q9NS68 423 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 COMMD9Q9P000 198 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 NCBP2LA6PVI3 153 aaKnown RBP12.31□□□□□ -0.44
COL11A1-204ENST00000427239 ATG12O94817 140 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 SPDEFO95238 335 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 NQO2P16083 231 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 VAMP1P23763 118 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 F2RL1P55085 397 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 RPL15P61313 204 aaKnown RBP12.31□□□□□ -0.44
COL11A1-204ENST00000427239 SRPXP78539 464 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 PPP1R1AQ13522 171 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 MMDQ15546 238 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 TMEM219Q86XT9 240 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 RHOVQ96L33 236 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 SLC25A33Q9BSK2 321 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 KIAA1456Q9P272 454 aa12.31□□□□□ -0.44
COL11A1-204ENST00000427239 C9orf170A2RU37 121 aa12.3□□□□□ -0.44
COL11A1-204ENST00000427239 SRRM4A7MD48 611 aaKnown RBP12.3□□□□□ -0.44
COL11A1-204ENST00000427239 INMT-MINDY4F8WBC2 141 aa12.3□□□□□ -0.44
COL11A1-204ENST00000427239 NBR2O15453 112 aa12.3□□□□□ -0.44
COL11A1-204ENST00000427239 FGF16O43320 207 aa12.3□□□□□ -0.44
COL11A1-204ENST00000427239 SFT2D2O95562 160 aa12.3□□□□□ -0.44
COL11A1-204ENST00000427239 DHFRP00374 187 aa12.3□□□□□ -0.44
COL11A1-204ENST00000427239 HLA-AP01891 365 aaKnown RBP12.3□□□□□ -0.44
COL11A1-204ENST00000427239 RNASE1P07998 156 aaKnown RBP12.3□□□□□ -0.44
COL11A1-204ENST00000427239 VSIG10L2P0DP72 767 aa12.3□□□□□ -0.44
COL11A1-204ENST00000427239 TMEM187Q14656 261 aa12.3□□□□□ -0.44
COL11A1-204ENST00000427239 VSTM2AQ8TAG5 236 aa12.3□□□□□ -0.44
COL11A1-204ENST00000427239 RBMXL1Q96E39 390 aaKnown RBP12.3□□□□□ -0.44
COL11A1-204ENST00000427239 TMEM56Q96MV1 263 aa12.3□□□□□ -0.44
COL11A1-204ENST00000427239 DUX5Q96PT3 197 aa12.3□□□□□ -0.44
COL11A1-204ENST00000427239 MOB4Q9Y3A3 225 aa12.3□□□□□ -0.44
COL11A1-204ENST00000427239 TMEM56-RWDD3S4R434 201 aa12.3□□□□□ -0.44
COL11A1-204ENST00000427239 PRAF2O60831 178 aa12.29□□□□□ -0.44
COL11A1-204ENST00000427239 S1PR2O95136 353 aa12.29□□□□□ -0.44
COL11A1-204ENST00000427239 NDUFA3O95167 84 aa12.29□□□□□ -0.44
COL11A1-204ENST00000427239 DUS4LO95620 317 aaKnown RBP12.29□□□□□ -0.44
COL11A1-204ENST00000427239 RAB25P57735 213 aa12.29□□□□□ -0.44
COL11A1-204ENST00000427239 UBE2KP61086 200 aa12.29□□□□□ -0.44
COL11A1-204ENST00000427239 DHRS2Q13268 280 aa12.29□□□□□ -0.44
COL11A1-204ENST00000427239 PSG5Q15238 335 aa12.29□□□□□ -0.44
COL11A1-204ENST00000427239 POU2AF1Q16633 256 aa12.29□□□□□ -0.44
COL11A1-204ENST00000427239 VMA21Q3ZAQ7 101 aa12.29□□□□□ -0.44
COL11A1-204ENST00000427239 FBLN7Q53RD9 439 aa12.29□□□□□ -0.44
COL11A1-204ENST00000427239 LYG2Q86SG7 212 aa12.29□□□□□ -0.44
COL11A1-204ENST00000427239 TEX45Q8NA69 505 aa12.29□□□□□ -0.44
COL11A1-204ENST00000427239 IL22RA2Q969J5 263 aa12.29□□□□□ -0.44
COL11A1-204ENST00000427239 ANKRD34BA5PLL1 514 aa12.28□□□□□ -0.44
COL11A1-204ENST00000427239 MARCH11A6NNE9 402 aa12.28□□□□□ -0.44
COL11A1-204ENST00000427239 RRHO14718 337 aa12.28□□□□□ -0.44
COL11A1-204ENST00000427239 GPR137BO60478 399 aa12.28□□□□□ -0.44
COL11A1-204ENST00000427239 KRASP01116 189 aa12.28□□□□□ -0.44
COL11A1-204ENST00000427239 IGLV2-23P01705 113 aa12.28□□□□□ -0.44
COL11A1-204ENST00000427239 IL5P05113 134 aa12.28□□□□□ -0.44
COL11A1-204ENST00000427239 ERVK-16P61578 105 aa12.28□□□□□ -0.44
COL11A1-204ENST00000427239 UBA52P62987 128 aaKnown RBP12.28□□□□□ -0.44
COL11A1-204ENST00000427239 ZNF695Q8IW36 515 aa12.28□□□□□ -0.44
COL11A1-204ENST00000427239 FAM71E2Q8N5Q1 922 aa12.28□□□□□ -0.44
COL11A1-204ENST00000427239 RBPMSQ93062 196 aaKnown RBP12.28□□□□□ -0.44
COL11A1-204ENST00000427239 R3HDM4Q96D70 268 aa12.28□□□□□ -0.44
COL11A1-204ENST00000427239 BEX1Q9HBH7 125 aa12.28□□□□□ -0.44
COL11A1-204ENST00000427239 TRIM77I1YAP6 450 aa12.28□□□□□ -0.44
COL11A1-204ENST00000427239 SPNP16150 400 aa12.28□□□□□ -0.44
COL11A1-204ENST00000427239 CNTFRP26992 372 aa12.28□□□□□ -0.44
COL11A1-204ENST00000427239 IFITM2Q01629 132 aa12.28□□□□□ -0.44
COL11A1-204ENST00000427239 LGI3Q8N145 548 aa12.28□□□□□ -0.44
COL11A1-204ENST00000427239 LRTM2Q8N967 370 aa12.28□□□□□ -0.44
COL11A1-204ENST00000427239 Q8N9W7 124 aa12.28□□□□□ -0.44
COL11A1-204ENST00000427239 DMBX1Q8NFW5 382 aa12.28□□□□□ -0.44
COL11A1-204ENST00000427239 SEC22AQ96IW7 307 aa12.28□□□□□ -0.44
COL11A1-204ENST00000427239 RASL11BQ9BPW5 248 aa12.28□□□□□ -0.44
COL11A1-204ENST00000427239 GPN1Q9HCN4 374 aaPredicted RBP12.28□□□□□ -0.44
COL11A1-204ENST00000427239 JMJD1CQ15652 2540 aa12.28□□□□□ -0.44
COL11A1-204ENST00000427239 SLC25A17O43808 307 aa12.27□□□□□ -0.45
COL11A1-204ENST00000427239 CHST1O43916 411 aa12.27□□□□□ -0.45
COL11A1-204ENST00000427239 OR2A4O95047 310 aa12.27□□□□□ -0.45
COL11A1-204ENST00000427239 IGKV1-39P01597 117 aa12.27□□□□□ -0.45
COL11A1-204ENST00000427239 IGKV1D-39P04432 117 aa12.27□□□□□ -0.45
COL11A1-204ENST00000427239 PLGLAQ15195 96 aa12.27□□□□□ -0.45
COL11A1-204ENST00000427239 C5orf64Q2M2E5 130 aa12.27□□□□□ -0.45
COL11A1-204ENST00000427239 LIN54Q6MZP7 749 aa12.27□□□□□ -0.45
COL11A1-204ENST00000427239 PPP1R27Q86WC6 154 aa12.27□□□□□ -0.45
COL11A1-204ENST00000427239 VKORC1L1Q8N0U8 176 aa12.27□□□□□ -0.45
COL11A1-204ENST00000427239 C5orf56Q8N8D9 126 aa12.27□□□□□ -0.45
COL11A1-204ENST00000427239 COQ8AQ8NI60 647 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms