RNA–Protein interactions for RNA: ENST00000427118.1

AFF3-208, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-208ENST00000427118 SIRPDQ9H106 197 aa13.06□□□□□ -0.32
AFF3-208ENST00000427118 C19orf12Q9NSK7 152 aa13.06□□□□□ -0.32
AFF3-208ENST00000427118 ONECUT1Q9UBC0 465 aa13.06□□□□□ -0.32
AFF3-208ENST00000427118 FBN3Q75N90 2809 aa13.05□□□□□ -0.32
AFF3-208ENST00000427118 MDFIC2A0A1B0GVS7 189 aa13.05□□□□□ -0.32
AFF3-208ENST00000427118 M0R1W7 72 aa13.05□□□□□ -0.32
AFF3-208ENST00000427118 CFDP00746 253 aaPredicted RBP13.05□□□□□ -0.32
AFF3-208ENST00000427118 HKR1P10072 659 aa13.05□□□□□ -0.32
AFF3-208ENST00000427118 LPAR6P43657 344 aa13.05□□□□□ -0.32
AFF3-208ENST00000427118 LOXL3P58215 753 aa13.05□□□□□ -0.32
AFF3-208ENST00000427118 ID3Q02535 119 aa13.05□□□□□ -0.32
AFF3-208ENST00000427118 EIF4EBP1Q13541 118 aaPredicted RBP13.05□□□□□ -0.32
AFF3-208ENST00000427118 TMEM200BQ69YZ2 307 aa13.05□□□□□ -0.32
AFF3-208ENST00000427118 BRD3OSQ6XYD6 125 aa13.05□□□□□ -0.32
AFF3-208ENST00000427118 SLC7A5P1Q8MH63 180 aa13.05□□□□□ -0.32
AFF3-208ENST00000427118 LRRC20Q8TCA0 184 aa13.05□□□□□ -0.32
AFF3-208ENST00000427118 ADTRPQ96IZ2 230 aa13.05□□□□□ -0.32
AFF3-208ENST00000427118 FAM210AQ96ND0 272 aa13.05□□□□□ -0.32
AFF3-208ENST00000427118 PCGF1Q9BSM1 259 aa13.05□□□□□ -0.32
AFF3-208ENST00000427118 SLC25A32Q9H2D1 315 aa13.05□□□□□ -0.32
AFF3-208ENST00000427118 SDHAF2Q9NX18 166 aa13.05□□□□□ -0.32
AFF3-208ENST00000427118 PRELID3BQ9Y3B1 194 aa13.05□□□□□ -0.32
AFF3-208ENST00000427118 LINC00862A6NCI5 91 aa13.04□□□□□ -0.32
AFF3-208ENST00000427118 FAM90A26D6RGX4 464 aa13.04□□□□□ -0.32
AFF3-208ENST00000427118 ST8SIA5O15466 376 aa13.04□□□□□ -0.32
AFF3-208ENST00000427118 SPDEFO95238 335 aa13.04□□□□□ -0.32
AFF3-208ENST00000427118 ARHGDIBP52566 201 aa13.04□□□□□ -0.32
AFF3-208ENST00000427118 LTC4SQ16873 150 aa13.04□□□□□ -0.32
AFF3-208ENST00000427118 RUSC1-AS1Q66K80 236 aa13.04□□□□□ -0.32
AFF3-208ENST00000427118 GPR146Q96CH1 333 aa13.04□□□□□ -0.32
AFF3-208ENST00000427118 TBX15Q96SF7 602 aa13.04□□□□□ -0.32
AFF3-208ENST00000427118 GPHA2Q96T91 129 aa13.04□□□□□ -0.32
AFF3-208ENST00000427118 AGMATQ9BSE5 352 aa13.04□□□□□ -0.32
AFF3-208ENST00000427118 ABHD14AQ9BUJ0 271 aa13.04□□□□□ -0.32
AFF3-208ENST00000427118 COA4Q9NYJ1 87 aa13.04□□□□□ -0.32
AFF3-208ENST00000427118 CACFD1Q9UGQ2 172 aa13.04□□□□□ -0.32
AFF3-208ENST00000427118 RCL1Q9Y2P8 373 aaKnown RBP13.04□□□□□ -0.32
AFF3-208ENST00000427118 MMP24Q9Y5R2 645 aa13.04□□□□□ -0.32
AFF3-208ENST00000427118 BORCS7-ASMTA0A0B4J1R7 106 aa13.03□□□□□ -0.32
AFF3-208ENST00000427118 hCG_1809904A0A1W2PP81 198 aa13.03□□□□□ -0.32
AFF3-208ENST00000427118 A0A1W2PPE2 198 aa13.03□□□□□ -0.32
AFF3-208ENST00000427118 A0A1W2PR64 198 aa13.03□□□□□ -0.32
AFF3-208ENST00000427118 A0A1W2PRV1 198 aa13.03□□□□□ -0.32
AFF3-208ENST00000427118 RAB29O14966 203 aa13.03□□□□□ -0.32
AFF3-208ENST00000427118 RBFOX2O43251 390 aaKnown RBP eCLIP13.03□□□□□ -0.32
AFF3-208ENST00000427118 JTBO76095 146 aa13.03□□□□□ -0.32
AFF3-208ENST00000427118 GAPDHP04406 335 aaKnown RBP13.03□□□□□ -0.32
AFF3-208ENST00000427118 ZNF585BQ52M93 769 aa13.03□□□□□ -0.32
AFF3-208ENST00000427118 VMO1Q7Z5L0 202 aa13.03□□□□□ -0.32
AFF3-208ENST00000427118 SPAG16Q8N0X2 631 aa13.03□□□□□ -0.32
AFF3-208ENST00000427118 ZNF714Q96N38 554 aa13.03□□□□□ -0.32
AFF3-208ENST00000427118 RAB40CQ96S21 281 aa13.03□□□□□ -0.32
AFF3-208ENST00000427118 MS4A7Q9GZW8 240 aaPredicted RBP13.03□□□□□ -0.32
AFF3-208ENST00000427118 DNAJC9-AS1A6NH13 148 aa13.02□□□□□ -0.33
AFF3-208ENST00000427118 TRIM77I1YAP6 450 aa13.02□□□□□ -0.33
AFF3-208ENST00000427118 PITX3O75364 302 aa13.02□□□□□ -0.33
AFF3-208ENST00000427118 MED6O75586 246 aa13.02□□□□□ -0.33
AFF3-208ENST00000427118 PRTN3P24158 256 aa13.02□□□□□ -0.33
AFF3-208ENST00000427118 DLX1P56177 255 aa13.02□□□□□ -0.33
AFF3-208ENST00000427118 BPIFB3P59826 476 aa13.02□□□□□ -0.33
AFF3-208ENST00000427118 RPL23AP62750 156 aaKnown RBP13.02□□□□□ -0.33
AFF3-208ENST00000427118 PRB3Q04118 309 aaPredicted RBP13.02□□□□□ -0.33
AFF3-208ENST00000427118 ZNF273Q14593 569 aa13.02□□□□□ -0.33
AFF3-208ENST00000427118 BAP18Q8IXM2 172 aa13.02□□□□□ -0.33
AFF3-208ENST00000427118 Q8N7P7 452 aa13.02□□□□□ -0.33
AFF3-208ENST00000427118 TAF15Q92804 592 aaKnown RBP eCLIP13.02□□□□□ -0.33
AFF3-208ENST00000427118 UNKLQ9H9P5 680 aaKnown RBP13.02□□□□□ -0.33
AFF3-208ENST00000427118 MSGN1A6NI15 193 aa13.01□□□□□ -0.33
AFF3-208ENST00000427118 FAM90A9PA6NNJ1 464 aa13.01□□□□□ -0.33
AFF3-208ENST00000427118 C17orf98A8MV24 154 aa13.01□□□□□ -0.33
AFF3-208ENST00000427118 M0R1X1 148 aa13.01□□□□□ -0.33
AFF3-208ENST00000427118 LY86O95711 162 aa13.01□□□□□ -0.33
AFF3-208ENST00000427118 NFYBP25208 207 aa13.01□□□□□ -0.33
AFF3-208ENST00000427118 DUTP33316 252 aaKnown RBP13.01□□□□□ -0.33
AFF3-208ENST00000427118 THBS3P49746 956 aa13.01□□□□□ -0.33
AFF3-208ENST00000427118 ALKAL2Q6UX46 152 aa13.01□□□□□ -0.33
AFF3-208ENST00000427118 HEPN1Q6WQI6 88 aa13.01□□□□□ -0.33
AFF3-208ENST00000427118 C9orf139Q6ZV77 190 aa13.01□□□□□ -0.33
AFF3-208ENST00000427118 PDZD9Q8IXQ8 264 aa13.01□□□□□ -0.33
AFF3-208ENST00000427118 OR2C3Q8N628 320 aa13.01□□□□□ -0.33
AFF3-208ENST00000427118 LHX4Q969G2 390 aa13.01□□□□□ -0.33
AFF3-208ENST00000427118 JMJD8Q96S16 334 aa13.01□□□□□ -0.33
AFF3-208ENST00000427118 S1PR3Q99500 378 aa13.01□□□□□ -0.33
AFF3-208ENST00000427118 IFI27L2Q9H2X8 130 aa13.01□□□□□ -0.33
AFF3-208ENST00000427118 CACNG5Q9UF02 275 aa13.01□□□□□ -0.33
AFF3-208ENST00000427118 CENPVL3A0A0U1RRI6 287 aa13□□□□□ -0.33
AFF3-208ENST00000427118 TOR1AO14656 332 aa13□□□□□ -0.33
AFF3-208ENST00000427118 HPRT1P00492 218 aa13□□□□□ -0.33
AFF3-208ENST00000427118 IGKV1-39P01597 117 aa13□□□□□ -0.33
AFF3-208ENST00000427118 RBP4P02753 201 aa13□□□□□ -0.33
AFF3-208ENST00000427118 IGKV1D-39P04432 117 aa13□□□□□ -0.33
AFF3-208ENST00000427118 CCL3L1P16619 93 aa13□□□□□ -0.33
AFF3-208ENST00000427118 DLX6P56179 175 aa13□□□□□ -0.33
AFF3-208ENST00000427118 TAGLNQ01995 201 aaKnown RBP13□□□□□ -0.33
AFF3-208ENST00000427118 BAXQ07812 192 aa13□□□□□ -0.33
AFF3-208ENST00000427118 DEFB112Q30KQ8 113 aa13□□□□□ -0.33
AFF3-208ENST00000427118 NCR3LG1Q68D85 454 aa13□□□□□ -0.33
AFF3-208ENST00000427118 C11orf42Q8N5U0 333 aa13□□□□□ -0.33
AFF3-208ENST00000427118 C8orf31Q8N9H6 132 aa13□□□□□ -0.33
AFF3-208ENST00000427118 DMBX1Q8NFW5 382 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms