RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 RPEL1Q2QD12 228 aa7.61□□□□□ -1.19
GACAT3-201ENST00000426539 VMA21Q3ZAQ7 101 aa7.61□□□□□ -1.19
GACAT3-201ENST00000426539 ZNF367Q7RTV3 350 aa7.61□□□□□ -1.19
GACAT3-201ENST00000426539 ISOC1Q96CN7 298 aa7.61□□□□□ -1.19
GACAT3-201ENST00000426539 PHB2Q99623 299 aa7.61□□□□□ -1.19
GACAT3-201ENST00000426539 SPATA25Q9BR10 227 aa7.61□□□□□ -1.19
GACAT3-201ENST00000426539 GINS4Q9BRT9 223 aa7.61□□□□□ -1.19
GACAT3-201ENST00000426539 ZNF430Q9H8G1 570 aaPredicted RBP7.61□□□□□ -1.19
GACAT3-201ENST00000426539 RETNQ9HD89 108 aa7.61□□□□□ -1.19
GACAT3-201ENST00000426539 DMRT1Q9Y5R6 373 aa7.61□□□□□ -1.19
GACAT3-201ENST00000426539 EPPK1P58107 5090 aaKnown RBP7.6□□□□□ -1.19
GACAT3-201ENST00000426539 BIRC6Q9NR09 4857 aa7.6□□□□□ -1.19
GACAT3-201ENST00000426539 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.6□□□□□ -1.19
GACAT3-201ENST00000426539 J3QRK9 145 aa7.6□□□□□ -1.19
GACAT3-201ENST00000426539 PDCD5O14737 125 aa7.6□□□□□ -1.19
GACAT3-201ENST00000426539 EDN2P20800 178 aa7.6□□□□□ -1.19
GACAT3-201ENST00000426539 GADD45AP24522 165 aa7.6□□□□□ -1.19
GACAT3-201ENST00000426539 RPL30P62888 115 aaKnown RBP7.6□□□□□ -1.19
GACAT3-201ENST00000426539 CBX3Q13185 183 aa7.6□□□□□ -1.19
GACAT3-201ENST00000426539 LCN12Q6JVE5 192 aa7.6□□□□□ -1.19
GACAT3-201ENST00000426539 C19orf35Q6ZS72 473 aa7.6□□□□□ -1.19
GACAT3-201ENST00000426539 Q8N402 240 aa7.6□□□□□ -1.19
GACAT3-201ENST00000426539 TTC9CQ8N5M4 171 aa7.6□□□□□ -1.19
GACAT3-201ENST00000426539 OSR1Q8TAX0 266 aaPredicted RBP7.6□□□□□ -1.19
GACAT3-201ENST00000426539 SNAPC3Q92966 411 aa7.6□□□□□ -1.19
GACAT3-201ENST00000426539 ADTRPQ96IZ2 230 aa7.6□□□□□ -1.19
GACAT3-201ENST00000426539 NDUFB11Q9NX14 153 aa7.6□□□□□ -1.19
GACAT3-201ENST00000426539 RBM7Q9Y580 266 aaKnown RBP7.6□□□□□ -1.19
GACAT3-201ENST00000426539 IGKV1D-13A0A0B4J2D9 117 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 A0A1B0GW64 132 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 TRDV1A0A1B0GX56 115 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 SMIM30A4D0T7 59 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 FAM223BA6NKX1 122 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 ZNF785A8K8V0 405 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 FCGR3BO75015 233 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 IGKV1-13P0DP09 117 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 RAB3BP20337 219 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 NFYAP23511 347 aaPredicted RBP7.59□□□□□ -1.19
GACAT3-201ENST00000426539 DTYMKP23919 212 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 RANBP1P43487 201 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 BRWD1-AS2P59051 145 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 ATP5G2Q06055 141 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 EIF4EBP1Q13541 118 aaPredicted RBP7.59□□□□□ -1.19
GACAT3-201ENST00000426539 ARFRP1Q13795 201 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 EXOSC2Q13868 293 aaKnown RBP7.59□□□□□ -1.19
GACAT3-201ENST00000426539 CDK10Q15131 360 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 TATDN3Q17R31 274 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 CD300EQ496F6 205 aaPredicted RBP7.59□□□□□ -1.19
GACAT3-201ENST00000426539 C22orf42Q6IC83 251 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 GTSCR1Q86UQ5 136 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 FAM223AQ8IWN6 122 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 VKORC1L1Q8N0U8 176 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 ZNF645Q8N7E2 425 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 ACOT12Q8WYK0 555 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 ATG5Q9H1Y0 275 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 PLEKHA3Q9HB20 300 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 RBMX2Q9Y388 322 aaKnown RBP7.59□□□□□ -1.19
GACAT3-201ENST00000426539 TNCP24821 2201 aa7.59□□□□□ -1.19
GACAT3-201ENST00000426539 DNAH1Q9P2D7 4330 aa7.59□□□□□ -1.2
GACAT3-201ENST00000426539 RBMY1BA6NDE4 496 aaKnown RBP7.58□□□□□ -1.2
GACAT3-201ENST00000426539 METTL21EPA6NDL7 271 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 RBMY1EA6NEQ0 496 aaKnown RBP7.58□□□□□ -1.2
GACAT3-201ENST00000426539 HMX3A6NHT5 357 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 TEX22C9J3V5 150 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 PPP5D1E7EU14 171 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 E7EUB6 86 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 MPPED1O15442 326 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 SSX5O60225 188 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 HLA-DQB1P01920 261 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 IL6RP08887 468 aaPredicted RBP7.58□□□□□ -1.2
GACAT3-201ENST00000426539 CD7P09564 240 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 RBMY1DP0C7P1 496 aaKnown RBP7.58□□□□□ -1.2
GACAT3-201ENST00000426539 MYL9P24844 172 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 TALDO1P37837 337 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 DEFB114Q30KQ6 69 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 CDNFQ49AH0 187 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 OR2B11Q5JQS5 317 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 NECAP1Q8NC96 275 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 OR2K2Q8NGT1 345 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 NUDCD2Q8WVJ2 157 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 CNBD2Q96M20 576 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 ST6GALNAC5Q9BVH7 336 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 WFDC10AQ9H1F0 79 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 HIPK2Q9H2X6 1198 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 TUBA4BQ9H853 241 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 PEMTQ9UBM1 199 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 OR2W1Q9Y3N9 320 aa7.58□□□□□ -1.2
GACAT3-201ENST00000426539 AIREO43918 545 aa7.57□□□□□ -1.2
GACAT3-201ENST00000426539 TUSC2O75896 110 aa7.57□□□□□ -1.2
GACAT3-201ENST00000426539 OR2J3O76001 311 aa7.57□□□□□ -1.2
GACAT3-201ENST00000426539 HLA-AP01891 365 aaKnown RBP7.57□□□□□ -1.2
GACAT3-201ENST00000426539 GALP22466 123 aa7.57□□□□□ -1.2
GACAT3-201ENST00000426539 CD81P60033 236 aa7.57□□□□□ -1.2
GACAT3-201ENST00000426539 C15orf32Q32M92 178 aa7.57□□□□□ -1.2
GACAT3-201ENST00000426539 HACD4Q5VWC8 232 aa7.57□□□□□ -1.2
GACAT3-201ENST00000426539 IZUMO2Q6UXV1 221 aa7.57□□□□□ -1.2
GACAT3-201ENST00000426539 KCTD9Q7L273 389 aa7.57□□□□□ -1.2
GACAT3-201ENST00000426539 MMD2Q8IY49 270 aa7.57□□□□□ -1.2
GACAT3-201ENST00000426539 PUSL1Q8N0Z8 303 aaKnown RBP7.57□□□□□ -1.2
GACAT3-201ENST00000426539 DEFB125Q8N687 156 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms