RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 GNB1P62873 340 aa9.9□□□□□ -0.82
GPC1-204ENST00000426280 RPL30P62888 115 aaKnown RBP9.9□□□□□ -0.82
GPC1-204ENST00000426280 ECSCRQ19T08 205 aa9.9□□□□□ -0.82
GPC1-204ENST00000426280 PYDC2Q56P42 97 aa9.9□□□□□ -0.82
GPC1-204ENST00000426280 CXorf66Q5JRM2 361 aaPredicted RBP9.9□□□□□ -0.82
GPC1-204ENST00000426280 FAAP20Q6NZ36 180 aa9.9□□□□□ -0.82
GPC1-204ENST00000426280 DHRS11Q6UWP2 260 aa9.9□□□□□ -0.82
GPC1-204ENST00000426280 TMEM17Q86X19 198 aa9.9□□□□□ -0.82
GPC1-204ENST00000426280 ZNF645Q8N7E2 425 aa9.9□□□□□ -0.82
GPC1-204ENST00000426280 TMEM229BQ8NBD8 167 aa9.9□□□□□ -0.82
GPC1-204ENST00000426280 DDB2Q92466 427 aa9.9□□□□□ -0.82
GPC1-204ENST00000426280 SLC5A7Q9GZV3 580 aa9.9□□□□□ -0.82
GPC1-204ENST00000426280 FXYD6Q9H0Q3 95 aa9.9□□□□□ -0.82
GPC1-204ENST00000426280 BATF3Q9NR55 127 aa9.9□□□□□ -0.82
GPC1-204ENST00000426280 SLC35D1Q9NTN3 355 aa9.9□□□□□ -0.82
GPC1-204ENST00000426280 RABL2AQ9UBK7 228 aaPredicted RBP9.9□□□□□ -0.82
GPC1-204ENST00000426280 RABL2BQ9UNT1 228 aa9.9□□□□□ -0.82
GPC1-204ENST00000426280 RBMX2Q9Y388 322 aaKnown RBP9.9□□□□□ -0.82
GPC1-204ENST00000426280 TGP01266 2768 aa9.9□□□□□ -0.83
GPC1-204ENST00000426280 I3L521 148 aa9.89□□□□□ -0.83
GPC1-204ENST00000426280 TNFSF12O43508 249 aa9.89□□□□□ -0.83
GPC1-204ENST00000426280 GSTZ1O43708 216 aaPredicted RBP9.89□□□□□ -0.83
GPC1-204ENST00000426280 SLC25A17O43808 307 aa9.89□□□□□ -0.83
GPC1-204ENST00000426280 DUTP33316 252 aaKnown RBP9.89□□□□□ -0.83
GPC1-204ENST00000426280 ETV6P41212 452 aa9.89□□□□□ -0.83
GPC1-204ENST00000426280 RAB9AP51151 201 aa9.89□□□□□ -0.83
GPC1-204ENST00000426280 BRWD1-AS2P59051 145 aa9.89□□□□□ -0.83
GPC1-204ENST00000426280 TAS2R19P59542 299 aa9.89□□□□□ -0.83
GPC1-204ENST00000426280 HERV-K104P61576 105 aa9.89□□□□□ -0.83
GPC1-204ENST00000426280 TSPAN5P62079 268 aa9.89□□□□□ -0.83
GPC1-204ENST00000426280 RNASE10Q5GAN6 216 aaKnown RBP9.89□□□□□ -0.83
GPC1-204ENST00000426280 VAX1Q5SQQ9 334 aa9.89□□□□□ -0.83
GPC1-204ENST00000426280 STEAP1BQ6NZ63 245 aa9.89□□□□□ -0.83
GPC1-204ENST00000426280 LFNGQ8NES3 379 aa9.89□□□□□ -0.83
GPC1-204ENST00000426280 OR6F1Q8NGZ6 308 aa9.89□□□□□ -0.83
GPC1-204ENST00000426280 MOB3AQ96BX8 217 aa9.89□□□□□ -0.83
GPC1-204ENST00000426280 RCC1LQ96I51 464 aaKnown RBP9.89□□□□□ -0.83
GPC1-204ENST00000426280 GON7Q9BXV9 100 aa9.89□□□□□ -0.83
GPC1-204ENST00000426280 KIAA1456Q9P272 454 aa9.89□□□□□ -0.83
GPC1-204ENST00000426280 A0A1W2PN81 502 aa9.88□□□□□ -0.83
GPC1-204ENST00000426280 RAB3DO95716 219 aa9.88□□□□□ -0.83
GPC1-204ENST00000426280 CD74P04233 296 aa9.88□□□□□ -0.83
GPC1-204ENST00000426280 CHRNA7P36544 502 aa9.88□□□□□ -0.83
GPC1-204ENST00000426280 CRIP2P52943 208 aaPredicted RBP9.88□□□□□ -0.83
GPC1-204ENST00000426280 RAB25P57735 213 aa9.88□□□□□ -0.83
GPC1-204ENST00000426280 EGFEM1PQ0D2K5 195 aa9.88□□□□□ -0.83
GPC1-204ENST00000426280 EIF4EBP1Q13541 118 aaPredicted RBP9.88□□□□□ -0.83
GPC1-204ENST00000426280 PLGLAQ15195 96 aa9.88□□□□□ -0.83
GPC1-204ENST00000426280 ACTBL2Q562R1 376 aa9.88□□□□□ -0.83
GPC1-204ENST00000426280 OR2B11Q5JQS5 317 aa9.88□□□□□ -0.83
GPC1-204ENST00000426280 SPANXN2Q5MJ10 180 aa9.88□□□□□ -0.83
GPC1-204ENST00000426280 ZNF818PQ6ZRF7 136 aa9.88□□□□□ -0.83
GPC1-204ENST00000426280 PPP1R27Q86WC6 154 aa9.88□□□□□ -0.83
GPC1-204ENST00000426280 PDPNQ86YL7 162 aa9.88□□□□□ -0.83
GPC1-204ENST00000426280 OR11H1Q8NG94 326 aa9.88□□□□□ -0.83
GPC1-204ENST00000426280 MRAPQ8TCY5 172 aa9.88□□□□□ -0.83
GPC1-204ENST00000426280 FLYWCH2Q96CP2 140 aaKnown RBP9.88□□□□□ -0.83
GPC1-204ENST00000426280 MS4A10Q96PG2 267 aa9.88□□□□□ -0.83
GPC1-204ENST00000426280 RNF5Q99942 180 aa9.88□□□□□ -0.83
GPC1-204ENST00000426280 THAP7Q9BT49 309 aaPredicted RBP9.88□□□□□ -0.83
GPC1-204ENST00000426280 SRRQ9GZT4 340 aa9.88□□□□□ -0.83
GPC1-204ENST00000426280 TAS2R8Q9NYW2 309 aa9.88□□□□□ -0.83
GPC1-204ENST00000426280 ANKRD20A5PA0PJZ0 165 aa9.87□□□□□ -0.83
GPC1-204ENST00000426280 RBMXL2O75526 392 aaKnown RBP9.87□□□□□ -0.83
GPC1-204ENST00000426280 APOA2P02652 100 aa9.87□□□□□ -0.83
GPC1-204ENST00000426280 ZNF735P0CB33 412 aa9.87□□□□□ -0.83
GPC1-204ENST00000426280 GNRHRP30968 328 aa9.87□□□□□ -0.83
GPC1-204ENST00000426280 SSBP1Q04837 148 aaKnown RBP9.87□□□□□ -0.83
GPC1-204ENST00000426280 FHL3Q13643 280 aa9.87□□□□□ -0.83
GPC1-204ENST00000426280 FXYD3Q14802 87 aa9.87□□□□□ -0.83
GPC1-204ENST00000426280 TMEM177Q53S58 311 aa9.87□□□□□ -0.83
GPC1-204ENST00000426280 AADACL3Q5VUY0 350 aa9.87□□□□□ -0.83
GPC1-204ENST00000426280 UNQ5815/PRO19632Q6UWF5 114 aa9.87□□□□□ -0.83
GPC1-204ENST00000426280 ZNF562Q6V9R5 426 aa9.87□□□□□ -0.83
GPC1-204ENST00000426280 Q8N402 240 aa9.87□□□□□ -0.83
GPC1-204ENST00000426280 MFSD4AQ8N468 514 aa9.87□□□□□ -0.83
GPC1-204ENST00000426280 OR5T1Q8NG75 326 aa9.87□□□□□ -0.83
GPC1-204ENST00000426280 OR4C16Q8NGL9 310 aa9.87□□□□□ -0.83
GPC1-204ENST00000426280 C4orf3Q8WVX3 66 aa9.87□□□□□ -0.83
GPC1-204ENST00000426280 TRIM63Q969Q1 353 aa9.87□□□□□ -0.83
GPC1-204ENST00000426280 UBE2E2Q96LR5 201 aa9.87□□□□□ -0.83
GPC1-204ENST00000426280 SDHCQ99643 169 aaPredicted RBP9.87□□□□□ -0.83
GPC1-204ENST00000426280 TNCP24821 2201 aa9.87□□□□□ -0.83
GPC1-204ENST00000426280 SLC22A5O76082 557 aa9.86□□□□□ -0.83
GPC1-204ENST00000426280 IGHV3-11P01762 117 aa9.86□□□□□ -0.83
GPC1-204ENST00000426280 IFNA6P05013 189 aa9.86□□□□□ -0.83
GPC1-204ENST00000426280 AKAIN1P0CW23 69 aa9.86□□□□□ -0.83
GPC1-204ENST00000426280 APELAP0DMC3 54 aa9.86□□□□□ -0.83
GPC1-204ENST00000426280 PTBP1P26599 531 aaKnown RBP eCLIP9.86□□□□□ -0.83
GPC1-204ENST00000426280 DEFA5Q01523 94 aa9.86□□□□□ -0.83
GPC1-204ENST00000426280 TAGLNQ01995 201 aaKnown RBP9.86□□□□□ -0.83
GPC1-204ENST00000426280 BAK1Q16611 211 aa9.86□□□□□ -0.83
GPC1-204ENST00000426280 SCGB2B2Q4G0G5 96 aa9.86□□□□□ -0.83
GPC1-204ENST00000426280 IDO2Q6ZQW0 420 aa9.86□□□□□ -0.83
GPC1-204ENST00000426280 KCTD9Q7L273 389 aa9.86□□□□□ -0.83
GPC1-204ENST00000426280 LHFPL1Q86WI0 220 aa9.86□□□□□ -0.83
GPC1-204ENST00000426280 OR1N2Q8NGR9 330 aa9.86□□□□□ -0.83
GPC1-204ENST00000426280 GRPEL2Q8TAA5 225 aa9.86□□□□□ -0.83
GPC1-204ENST00000426280 ABHD5Q8WTS1 349 aa9.86□□□□□ -0.83
GPC1-204ENST00000426280 TCTEX1D2Q8WW35 142 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms