RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 ENY2Q9NPA8 101 aa11.21□□□□□ -0.61
USP42-203ENST00000426246 PRR27Q6MZM9 219 aa11.21□□□□□ -0.62
USP42-203ENST00000426246 MOGAT3Q86VF5 341 aa11.21□□□□□ -0.62
USP42-203ENST00000426246 FDCSPQ8NFU4 85 aa11.21□□□□□ -0.62
USP42-203ENST00000426246 R3HDM4Q96D70 268 aa11.21□□□□□ -0.62
USP42-203ENST00000426246 LINC00473A8K010 186 aa11.2□□□□□ -0.62
USP42-203ENST00000426246 SPINT2O43291 252 aa11.2□□□□□ -0.62
USP42-203ENST00000426246 PLAUP00749 431 aa11.2□□□□□ -0.62
USP42-203ENST00000426246 FAM216AQ8WUB2 273 aa11.2□□□□□ -0.62
USP42-203ENST00000426246 ZMAT5Q9UDW3 170 aaKnown RBP11.2□□□□□ -0.62
USP42-203ENST00000426246 RELNP78509 3460 aa11.2□□□□□ -0.62
USP42-203ENST00000426246 OR7C2O60412 319 aa11.2□□□□□ -0.62
USP42-203ENST00000426246 TNFSF10P50591 281 aa11.2□□□□□ -0.62
USP42-203ENST00000426246 SAMD10Q9BYL1 202 aa11.2□□□□□ -0.62
USP42-203ENST00000426246 RIMS4Q9H426 269 aaPredicted RBP11.2□□□□□ -0.62
USP42-203ENST00000426246 DECR2Q9NUI1 292 aa11.2□□□□□ -0.62
USP42-203ENST00000426246 KLF2Q9Y5W3 355 aaPredicted RBP11.2□□□□□ -0.62
USP42-203ENST00000426246 IGKV3D-15A0A087WSY6 115 aa11.2□□□□□ -0.62
USP42-203ENST00000426246 MARCH11A6NNE9 402 aa11.2□□□□□ -0.62
USP42-203ENST00000426246 IGHV2-5P01817 119 aa11.2□□□□□ -0.62
USP42-203ENST00000426246 IGHV1-2P23083 117 aa11.2□□□□□ -0.62
USP42-203ENST00000426246 C21orf62-AS1Q17RA5 79 aa11.2□□□□□ -0.62
USP42-203ENST00000426246 MRGPRGQ86SM5 289 aa11.2□□□□□ -0.62
USP42-203ENST00000426246 CYB5R3P00387 301 aaPredicted RBP11.19□□□□□ -0.62
USP42-203ENST00000426246 ZNF90Q03938 601 aa11.19□□□□□ -0.62
USP42-203ENST00000426246 FXYD3Q14802 87 aa11.19□□□□□ -0.62
USP42-203ENST00000426246 SGMS2Q8NHU3 365 aa11.19□□□□□ -0.62
USP42-203ENST00000426246 TECTBQ96PL2 329 aa11.19□□□□□ -0.62
USP42-203ENST00000426246 PLEKHA3Q9HB20 300 aa11.19□□□□□ -0.62
USP42-203ENST00000426246 PLSCR2Q9NRY7 297 aa11.19□□□□□ -0.62
USP42-203ENST00000426246 TRAPPC1Q9Y5R8 145 aa11.19□□□□□ -0.62
USP42-203ENST00000426246 TRAV34A0A0B4J273 112 aa11.19□□□□□ -0.62
USP42-203ENST00000426246 C1QL4Q86Z23 238 aa11.19□□□□□ -0.62
USP42-203ENST00000426246 OR2T10Q8NGZ9 312 aa11.19□□□□□ -0.62
USP42-203ENST00000426246 SDF2L1Q9HCN8 221 aa11.19□□□□□ -0.62
USP42-203ENST00000426246 SMPD2O60906 423 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 NTF3P20783 257 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 OR5I1Q13606 314 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 UTF1Q5T230 341 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 MOB3BQ86TA1 216 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 H1FXQ92522 213 aaKnown RBP11.18□□□□□ -0.62
USP42-203ENST00000426246 SNRNP40Q96DI7 357 aaKnown RBP11.18□□□□□ -0.62
USP42-203ENST00000426246 ACY3Q96HD9 319 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 ZDHHC11Q9H8X9 412 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 CBLN4Q9NTU7 201 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 IL36GQ9NZH8 169 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 MDFIC2A0A1B0GVS7 189 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 H3BTX0 84 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 CEACAM4O75871 244 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 KITLGP21583 273 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 CD81P60033 236 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 RPL23P62829 140 aaKnown RBP11.18□□□□□ -0.62
USP42-203ENST00000426246 RNPS1Q15287 305 aaKnown RBP11.18□□□□□ -0.62
USP42-203ENST00000426246 Q6ZR03 302 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 SLC35E3Q7Z769 313 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 BAGE3Q86Y29 109 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 BAGE2Q86Y30 109 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 SNIP1Q8TAD8 396 aaKnown RBP11.18□□□□□ -0.62
USP42-203ENST00000426246 NAT8Q9UHE5 227 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 GZMHP20718 246 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 LRRC75BQ2VPJ9 315 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 ASCL4Q6XD76 172 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 HIST3H2BBQ8N257 126 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 LINC00469Q8N7U9 141 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 OR4P4Q8NGL7 312 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 TMEM45BQ96B21 275 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 HIST1H2BLQ99880 126 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 TUBG2Q9NRH3 451 aa11.18□□□□□ -0.62
USP42-203ENST00000426246 RNF212BA8MTL3 300 aa11.17□□□□□ -0.62
USP42-203ENST00000426246 H0Y8G0 127 aa11.17□□□□□ -0.62
USP42-203ENST00000426246 RRHO14718 337 aa11.17□□□□□ -0.62
USP42-203ENST00000426246 CLDN14O95500 239 aa11.17□□□□□ -0.62
USP42-203ENST00000426246 CBLN1P23435 193 aa11.17□□□□□ -0.62
USP42-203ENST00000426246 GNB2P62879 340 aa11.17□□□□□ -0.62
USP42-203ENST00000426246 CCL8P80075 99 aa11.17□□□□□ -0.62
USP42-203ENST00000426246 LYPD6BQ8NI32 183 aa11.17□□□□□ -0.62
USP42-203ENST00000426246 DYSFO75923 2080 aa11.17□□□□□ -0.62
USP42-203ENST00000426246 ARL14EPLP0DKL9 152 aa11.17□□□□□ -0.62
USP42-203ENST00000426246 MLANAQ16655 118 aa11.17□□□□□ -0.62
USP42-203ENST00000426246 DUX4L9Q6RFH8 374 aaPredicted RBP11.17□□□□□ -0.62
USP42-203ENST00000426246 HSD17B10Q99714 261 aaKnown RBP11.17□□□□□ -0.62
USP42-203ENST00000426246 HIPK2Q9H2X6 1198 aa11.17□□□□□ -0.62
USP42-203ENST00000426246 LRRC30A6NM36 301 aa11.17□□□□□ -0.62
USP42-203ENST00000426246 FOLR2P14207 255 aa11.17□□□□□ -0.62
USP42-203ENST00000426246 GPX4P36969 197 aaPredicted RBP11.17□□□□□ -0.62
USP42-203ENST00000426246 ZNF295-AS1Q8N0V1 137 aa11.17□□□□□ -0.62
USP42-203ENST00000426246 NEIL1Q96FI4 390 aaPredicted RBP11.17□□□□□ -0.62
USP42-203ENST00000426246 S1PR3Q99500 378 aa11.17□□□□□ -0.62
USP42-203ENST00000426246 TMEM147Q9BVK8 224 aa11.17□□□□□ -0.62
USP42-203ENST00000426246 A0A1W2PRD5 423 aa11.16□□□□□ -0.62
USP42-203ENST00000426246 A0A1W2PRF3 423 aa11.16□□□□□ -0.62
USP42-203ENST00000426246 A0A1W2PRM7 423 aa11.16□□□□□ -0.62
USP42-203ENST00000426246 OR9G9P0C7N8 305 aa11.16□□□□□ -0.62
USP42-203ENST00000426246 SPATA31B1PQ5VZV4 182 aa11.16□□□□□ -0.62
USP42-203ENST00000426246 TOMM20LQ6UXN7 152 aa11.16□□□□□ -0.62
USP42-203ENST00000426246 TMEM256Q8N2U0 113 aa11.16□□□□□ -0.62
USP42-203ENST00000426246 SPSB4Q96A44 273 aa11.16□□□□□ -0.62
USP42-203ENST00000426246 PAM16Q9Y3D7 125 aa11.16□□□□□ -0.62
USP42-203ENST00000426246 HCFC1P51610 2035 aa11.16□□□□□ -0.62
USP42-203ENST00000426246 F6UZH7 168 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms