RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 LINC00312Q9Y6C7 94 aa12.74□□□□□ -0.37
SHOX2-202ENST00000425436 NSD1Q96L73 2696 aaPredicted RBP12.74□□□□□ -0.37
SHOX2-202ENST00000425436 MXRA5Q9NR99 2828 aa12.74□□□□□ -0.37
SHOX2-202ENST00000425436 J3QLI3 93 aa12.73□□□□□ -0.37
SHOX2-202ENST00000425436 TOR1AO14656 332 aa12.73□□□□□ -0.37
SHOX2-202ENST00000425436 FGF16O43320 207 aa12.73□□□□□ -0.37
SHOX2-202ENST00000425436 MED6O75586 246 aa12.73□□□□□ -0.37
SHOX2-202ENST00000425436 IGKV1-39P01597 117 aa12.73□□□□□ -0.37
SHOX2-202ENST00000425436 IGKV1D-39P04432 117 aa12.73□□□□□ -0.37
SHOX2-202ENST00000425436 CCL3L1P16619 93 aa12.73□□□□□ -0.37
SHOX2-202ENST00000425436 POLR2GP62487 172 aaKnown RBP eCLIP12.73□□□□□ -0.37
SHOX2-202ENST00000425436 ZNF266Q14584 549 aa12.73□□□□□ -0.37
SHOX2-202ENST00000425436 C17orf58Q2M2W7 97 aa12.73□□□□□ -0.37
SHOX2-202ENST00000425436 CXorf66Q5JRM2 361 aaPredicted RBP12.73□□□□□ -0.37
SHOX2-202ENST00000425436 TCF23Q7RTU1 214 aa12.73□□□□□ -0.37
SHOX2-202ENST00000425436 HSD17B13Q7Z5P4 300 aaPredicted RBP12.73□□□□□ -0.37
SHOX2-202ENST00000425436 SPAG16Q8N0X2 631 aa12.73□□□□□ -0.37
SHOX2-202ENST00000425436 SAT2Q96F10 170 aaPredicted RBP12.73□□□□□ -0.37
SHOX2-202ENST00000425436 IDI2-AS1Q9NZ38 188 aa12.73□□□□□ -0.37
SHOX2-202ENST00000425436 WSB1Q9Y6I7 421 aa12.73□□□□□ -0.37
SHOX2-202ENST00000425436 IGHV3-43A0A0B4J1X8 118 aa12.72□□□□□ -0.37
SHOX2-202ENST00000425436 RBFOX2O43251 390 aaKnown RBP eCLIP12.72□□□□□ -0.37
SHOX2-202ENST00000425436 CHST1O43916 411 aa12.72□□□□□ -0.37
SHOX2-202ENST00000425436 SSSCA1O60232 199 aa12.72□□□□□ -0.37
SHOX2-202ENST00000425436 TOX4O94842 621 aa12.72□□□□□ -0.37
SHOX2-202ENST00000425436 LY86O95711 162 aa12.72□□□□□ -0.37
SHOX2-202ENST00000425436 IGHV3-43DP0DP04 118 aa12.72□□□□□ -0.37
SHOX2-202ENST00000425436 CAV2P51636 162 aa12.72□□□□□ -0.37
SHOX2-202ENST00000425436 AANATQ16613 207 aa12.72□□□□□ -0.37
SHOX2-202ENST00000425436 Q3ZCU0 254 aa12.72□□□□□ -0.37
SHOX2-202ENST00000425436 RPL7L1Q6DKI1 246 aaKnown RBP12.72□□□□□ -0.37
SHOX2-202ENST00000425436 Q8N7P7 452 aa12.72□□□□□ -0.37
SHOX2-202ENST00000425436 ADTRPQ96IZ2 230 aa12.72□□□□□ -0.37
SHOX2-202ENST00000425436 ARV1Q9H2C2 271 aa12.72□□□□□ -0.37
SHOX2-202ENST00000425436 CACNG5Q9UF02 275 aa12.72□□□□□ -0.37
SHOX2-202ENST00000425436 PRELID3BQ9Y3B1 194 aa12.72□□□□□ -0.37
SHOX2-202ENST00000425436 IGHV3OR16-10A0A075B7F0 116 aa12.72□□□□□ -0.37
SHOX2-202ENST00000425436 MFSD2BA6NFX1 497 aa12.72□□□□□ -0.37
SHOX2-202ENST00000425436 FAM90A9PA6NNJ1 464 aa12.72□□□□□ -0.37
SHOX2-202ENST00000425436 RAB29O14966 203 aa12.72□□□□□ -0.37
SHOX2-202ENST00000425436 ST8SIA5O15466 376 aa12.72□□□□□ -0.37
SHOX2-202ENST00000425436 IGKV1-5P01602 117 aa12.72□□□□□ -0.37
SHOX2-202ENST00000425436 EWSR1Q01844 656 aaKnown RBP eCLIP12.72□□□□□ -0.37
SHOX2-202ENST00000425436 TMEM252Q8N6L7 170 aa12.72□□□□□ -0.37
SHOX2-202ENST00000425436 PCNPQ8WW12 178 aaKnown RBP12.72□□□□□ -0.37
SHOX2-202ENST00000425436 SIRPDQ9H106 197 aa12.72□□□□□ -0.37
SHOX2-202ENST00000425436 SIRT7Q9NRC8 400 aa12.72□□□□□ -0.37
SHOX2-202ENST00000425436 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.72□□□□□ -0.37
SHOX2-202ENST00000425436 FN1P02751 2386 aaKnown RBP12.72□□□□□ -0.37
SHOX2-202ENST00000425436 SYNGR2O43760 224 aa12.71□□□□□ -0.38
SHOX2-202ENST00000425436 HPRT1P00492 218 aa12.71□□□□□ -0.38
SHOX2-202ENST00000425436 SEC11BP0C7V7 166 aa12.71□□□□□ -0.38
SHOX2-202ENST00000425436 EPHA1P21709 976 aa12.71□□□□□ -0.38
SHOX2-202ENST00000425436 DUTP33316 252 aaKnown RBP12.71□□□□□ -0.38
SHOX2-202ENST00000425436 RPL30P62888 115 aaKnown RBP12.71□□□□□ -0.38
SHOX2-202ENST00000425436 BLOC1S1P78537 153 aa12.71□□□□□ -0.38
SHOX2-202ENST00000425436 LTC4SQ16873 150 aa12.71□□□□□ -0.38
SHOX2-202ENST00000425436 VMO1Q7Z5L0 202 aa12.71□□□□□ -0.38
SHOX2-202ENST00000425436 STX12Q86Y82 276 aa12.71□□□□□ -0.38
SHOX2-202ENST00000425436 SMIM8Q96KF7 97 aa12.71□□□□□ -0.38
SHOX2-202ENST00000425436 TBX15Q96SF7 602 aa12.71□□□□□ -0.38
SHOX2-202ENST00000425436 ABHD14AQ9BUJ0 271 aa12.71□□□□□ -0.38
SHOX2-202ENST00000425436 TMEM160Q9NX00 188 aa12.71□□□□□ -0.38
SHOX2-202ENST00000425436 ZFHX3Q15911 3703 aa12.7□□□□□ -0.38
SHOX2-202ENST00000425436 A0A0G2JRQ6 117 aa12.7□□□□□ -0.38
SHOX2-202ENST00000425436 FAM24AA6NFZ4 105 aa12.7□□□□□ -0.38
SHOX2-202ENST00000425436 RAB5CP51148 216 aa12.7□□□□□ -0.38
SHOX2-202ENST00000425436 FAM74A1Q5RGS3 127 aa12.7□□□□□ -0.38
SHOX2-202ENST00000425436 C11orf42Q8N5U0 333 aa12.7□□□□□ -0.38
SHOX2-202ENST00000425436 TMED6Q8WW62 240 aa12.7□□□□□ -0.38
SHOX2-202ENST00000425436 CXorf58Q96LI9 332 aa12.7□□□□□ -0.38
SHOX2-202ENST00000425436 GINS3Q9BRX5 216 aa12.7□□□□□ -0.38
SHOX2-202ENST00000425436 MAGT1Q9H0U3 335 aa12.7□□□□□ -0.38
SHOX2-202ENST00000425436 KPTNQ9Y664 436 aa12.7□□□□□ -0.38
SHOX2-202ENST00000425436 A0A1W2PPH5 198 aa12.69□□□□□ -0.38
SHOX2-202ENST00000425436 KRBOX1C9JBD0 128 aa12.69□□□□□ -0.38
SHOX2-202ENST00000425436 I3L521 148 aa12.69□□□□□ -0.38
SHOX2-202ENST00000425436 DFFBO76075 338 aa12.69□□□□□ -0.38
SHOX2-202ENST00000425436 SCAF4O95104 1147 aaKnown RBP12.69□□□□□ -0.38
SHOX2-202ENST00000425436 P0C879 139 aa12.69□□□□□ -0.38
SHOX2-202ENST00000425436 FAM157CP0CG43 387 aa12.69□□□□□ -0.38
SHOX2-202ENST00000425436 IGHV4-38-2P0DP08 117 aa12.69□□□□□ -0.38
SHOX2-202ENST00000425436 SRP14P37108 136 aaKnown RBP12.69□□□□□ -0.38
SHOX2-202ENST00000425436 SULT1A2P50226 295 aa12.69□□□□□ -0.38
SHOX2-202ENST00000425436 DLX6P56179 175 aa12.69□□□□□ -0.38
SHOX2-202ENST00000425436 NHLH2Q02577 135 aa12.69□□□□□ -0.38
SHOX2-202ENST00000425436 KLF17Q5JT82 389 aaPredicted RBP12.69□□□□□ -0.38
SHOX2-202ENST00000425436 UQCC3Q6UW78 93 aa12.69□□□□□ -0.38
SHOX2-202ENST00000425436 Q6ZRM9 215 aa12.69□□□□□ -0.38
SHOX2-202ENST00000425436 H2BFWTQ7Z2G1 175 aa12.69□□□□□ -0.38
SHOX2-202ENST00000425436 KIR3DL3Q8N743 410 aa12.69□□□□□ -0.38
SHOX2-202ENST00000425436 LHX4Q969G2 390 aa12.69□□□□□ -0.38
SHOX2-202ENST00000425436 C5orf30Q96GV9 206 aa12.69□□□□□ -0.38
SHOX2-202ENST00000425436 ZNF714Q96N38 554 aa12.69□□□□□ -0.38
SHOX2-202ENST00000425436 S1PR3Q99500 378 aa12.69□□□□□ -0.38
SHOX2-202ENST00000425436 IFI27L2Q9H2X8 130 aa12.69□□□□□ -0.38
SHOX2-202ENST00000425436 RAB19A4D1S5 217 aa12.68□□□□□ -0.38
SHOX2-202ENST00000425436 C17orf98A8MV24 154 aa12.68□□□□□ -0.38
SHOX2-202ENST00000425436 M0R1W7 72 aa12.68□□□□□ -0.38
SHOX2-202ENST00000425436 M0R1X1 148 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms