RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 DYNC2LI1Q8TCX1 351 aa17.41■□□□□ 0.38
PTCHD3P2-201ENST00000424937 CASTOR1Q8WTX7 329 aa17.41■□□□□ 0.38
PTCHD3P2-201ENST00000424937 ISOC1Q96CN7 298 aa17.41■□□□□ 0.38
PTCHD3P2-201ENST00000424937 MIXL1Q9H2W2 232 aa17.41■□□□□ 0.38
PTCHD3P2-201ENST00000424937 CCDC59Q9P031 241 aaKnown RBP17.41■□□□□ 0.38
PTCHD3P2-201ENST00000424937 H3BMQ9 156 aa17.4■□□□□ 0.38
PTCHD3P2-201ENST00000424937 MYCNOSP40205 109 aa17.4■□□□□ 0.38
PTCHD3P2-201ENST00000424937 KIR2DS2P43631 304 aa17.4■□□□□ 0.38
PTCHD3P2-201ENST00000424937 RAB9AP51151 201 aa17.4■□□□□ 0.38
PTCHD3P2-201ENST00000424937 TNXAQ16473 311 aa17.4■□□□□ 0.38
PTCHD3P2-201ENST00000424937 BEAN1Q3B7T3 259 aa17.4■□□□□ 0.38
PTCHD3P2-201ENST00000424937 AKIRIN2Q53H80 203 aa17.4■□□□□ 0.38
PTCHD3P2-201ENST00000424937 ZNF818PQ6ZRF7 136 aa17.4■□□□□ 0.38
PTCHD3P2-201ENST00000424937 LYSMD2Q8IV50 215 aa17.4■□□□□ 0.38
PTCHD3P2-201ENST00000424937 MOB3AQ96BX8 217 aa17.4■□□□□ 0.38
PTCHD3P2-201ENST00000424937 FXYD6Q9H0Q3 95 aa17.4■□□□□ 0.38
PTCHD3P2-201ENST00000424937 CCL24O00175 119 aa17.39■□□□□ 0.37
PTCHD3P2-201ENST00000424937 CATR1Q13166 79 aa17.39■□□□□ 0.37
PTCHD3P2-201ENST00000424937 PRSS8Q16651 343 aa17.39■□□□□ 0.37
PTCHD3P2-201ENST00000424937 MRGPRG-AS1Q2M3A8 158 aa17.39■□□□□ 0.37
PTCHD3P2-201ENST00000424937 DHRS11Q6UWP2 260 aa17.39■□□□□ 0.37
PTCHD3P2-201ENST00000424937 VKORC1L1Q8N0U8 176 aa17.39■□□□□ 0.37
PTCHD3P2-201ENST00000424937 ZNF491Q8N8L2 437 aa17.39■□□□□ 0.37
PTCHD3P2-201ENST00000424937 OR5M8Q8NGP6 311 aa17.39■□□□□ 0.37
PTCHD3P2-201ENST00000424937 UBE2E2Q96LR5 201 aa17.39■□□□□ 0.37
PTCHD3P2-201ENST00000424937 OR5B12Q96R08 314 aa17.39■□□□□ 0.37
PTCHD3P2-201ENST00000424937 P2RX4Q99571 388 aa17.39■□□□□ 0.37
PTCHD3P2-201ENST00000424937 GNB4Q9HAV0 340 aa17.39■□□□□ 0.37
PTCHD3P2-201ENST00000424937 CTDSP2O14595 271 aa17.38■□□□□ 0.37
PTCHD3P2-201ENST00000424937 RAB25P57735 213 aa17.38■□□□□ 0.37
PTCHD3P2-201ENST00000424937 BRWD1-AS2P59051 145 aa17.38■□□□□ 0.37
PTCHD3P2-201ENST00000424937 PYHIN1Q6K0P9 492 aa17.38■□□□□ 0.37
PTCHD3P2-201ENST00000424937 OR6F1Q8NGZ6 308 aa17.38■□□□□ 0.37
PTCHD3P2-201ENST00000424937 OR51H1Q8NH63 302 aa17.38■□□□□ 0.37
PTCHD3P2-201ENST00000424937 OR52I2Q8NH67 350 aa17.38■□□□□ 0.37
PTCHD3P2-201ENST00000424937 BORCS5Q969J3 196 aa17.38■□□□□ 0.37
PTCHD3P2-201ENST00000424937 RCC1LQ96I51 464 aaKnown RBP17.38■□□□□ 0.37
PTCHD3P2-201ENST00000424937 VSIG4Q9Y279 399 aa17.38■□□□□ 0.37
PTCHD3P2-201ENST00000424937 WIPF1O43516 503 aa17.37■□□□□ 0.37
PTCHD3P2-201ENST00000424937 CREBL2O60519 120 aaPredicted RBP17.37■□□□□ 0.37
PTCHD3P2-201ENST00000424937 GNRHRP30968 328 aa17.37■□□□□ 0.37
PTCHD3P2-201ENST00000424937 TSPAN5P62079 268 aa17.37■□□□□ 0.37
PTCHD3P2-201ENST00000424937 KIAA0141Q14154 515 aaPredicted RBP17.37■□□□□ 0.37
PTCHD3P2-201ENST00000424937 KPRPQ5T749 579 aaPredicted RBP17.37■□□□□ 0.37
PTCHD3P2-201ENST00000424937 AADACL3Q5VUY0 350 aa17.37■□□□□ 0.37
PTCHD3P2-201ENST00000424937 SPAG16Q8N0X2 631 aa17.37■□□□□ 0.37
PTCHD3P2-201ENST00000424937 PHB2Q99623 299 aa17.37■□□□□ 0.37
PTCHD3P2-201ENST00000424937 ZNF430Q9H8G1 570 aaPredicted RBP17.37■□□□□ 0.37
PTCHD3P2-201ENST00000424937 M0QYG6 137 aa17.36■□□□□ 0.37
PTCHD3P2-201ENST00000424937 RAMP3O60896 148 aa17.36■□□□□ 0.37
PTCHD3P2-201ENST00000424937 CD40LGP29965 261 aa17.36■□□□□ 0.37
PTCHD3P2-201ENST00000424937 TPPP2P59282 170 aa17.36■□□□□ 0.37
PTCHD3P2-201ENST00000424937 C15orf40Q8WUR7 153 aa17.36■□□□□ 0.37
PTCHD3P2-201ENST00000424937 SRSF12Q8WXF0 261 aaKnown RBP17.36■□□□□ 0.37
PTCHD3P2-201ENST00000424937 MS4A10Q96PG2 267 aa17.36■□□□□ 0.37
PTCHD3P2-201ENST00000424937 ABHD1Q96SE0 405 aa17.36■□□□□ 0.37
PTCHD3P2-201ENST00000424937 C6orf62Q9GZU0 229 aaPredicted RBP17.36■□□□□ 0.37
PTCHD3P2-201ENST00000424937 KLK11Q9UBX7 282 aa17.36■□□□□ 0.37
PTCHD3P2-201ENST00000424937 CEPT1Q9Y6K0 416 aa17.36■□□□□ 0.37
PTCHD3P2-201ENST00000424937 CCDC160A6NGH7 325 aa17.35■□□□□ 0.37
PTCHD3P2-201ENST00000424937 ACTL6BO94805 426 aa17.35■□□□□ 0.37
PTCHD3P2-201ENST00000424937 TPPPO94811 219 aa17.35■□□□□ 0.37
PTCHD3P2-201ENST00000424937 RLN1P04808 185 aa17.35■□□□□ 0.37
PTCHD3P2-201ENST00000424937 APELAP0DMC3 54 aa17.35■□□□□ 0.37
PTCHD3P2-201ENST00000424937 SSX9Q7RTT3 188 aa17.35■□□□□ 0.37
PTCHD3P2-201ENST00000424937 MMD2Q8IY49 270 aa17.35■□□□□ 0.37
PTCHD3P2-201ENST00000424937 OR5T1Q8NG75 326 aa17.35■□□□□ 0.37
PTCHD3P2-201ENST00000424937 VSTM2AQ8TAG5 236 aa17.35■□□□□ 0.37
PTCHD3P2-201ENST00000424937 ZNF355PQ9NSJ1 428 aa17.35■□□□□ 0.37
PTCHD3P2-201ENST00000424937 I3L521 148 aa17.34■□□□□ 0.37
PTCHD3P2-201ENST00000424937 RBFOX2O43251 390 aaKnown RBP eCLIP17.34■□□□□ 0.37
PTCHD3P2-201ENST00000424937 KBTBD11O94819 623 aa17.34■□□□□ 0.37
PTCHD3P2-201ENST00000424937 OR2A4O95047 310 aa17.34■□□□□ 0.37
PTCHD3P2-201ENST00000424937 DUS4LO95620 317 aaKnown RBP17.34■□□□□ 0.37
PTCHD3P2-201ENST00000424937 HRASP01112 189 aa17.34■□□□□ 0.37
PTCHD3P2-201ENST00000424937 TRGV3P03979 118 aa17.34■□□□□ 0.37
PTCHD3P2-201ENST00000424937 C10orf55Q5SWW7 151 aa17.34■□□□□ 0.37
PTCHD3P2-201ENST00000424937 ASPHD1Q5U4P2 390 aa17.34■□□□□ 0.37
PTCHD3P2-201ENST00000424937 POC5Q8NA72 575 aa17.34■□□□□ 0.37
PTCHD3P2-201ENST00000424937 OR11H1Q8NG94 326 aa17.34■□□□□ 0.37
PTCHD3P2-201ENST00000424937 RHOVQ96L33 236 aa17.34■□□□□ 0.37
PTCHD3P2-201ENST00000424937 OR2A7Q96R45 310 aa17.34■□□□□ 0.37
PTCHD3P2-201ENST00000424937 SLA2Q9H6Q3 261 aa17.34■□□□□ 0.37
PTCHD3P2-201ENST00000424937 MTFP1Q9UDX5 166 aa17.34■□□□□ 0.37
PTCHD3P2-201ENST00000424937 MSGN1A6NI15 193 aa17.33■□□□□ 0.36
PTCHD3P2-201ENST00000424937 GPR31O00270 319 aa17.33■□□□□ 0.36
PTCHD3P2-201ENST00000424937 MPPED1O15442 326 aa17.33■□□□□ 0.36
PTCHD3P2-201ENST00000424937 PRB2P02812 416 aaPredicted RBP17.33■□□□□ 0.36
PTCHD3P2-201ENST00000424937 DGCR2P98153 550 aa17.33■□□□□ 0.36
PTCHD3P2-201ENST00000424937 RUNX1Q01196 453 aa17.33■□□□□ 0.36
PTCHD3P2-201ENST00000424937 PDLIM3Q53GG5 364 aaPredicted RBP17.33■□□□□ 0.36
PTCHD3P2-201ENST00000424937 VAX1Q5SQQ9 334 aa17.33■□□□□ 0.36
PTCHD3P2-201ENST00000424937 CMTM1Q8IZ96 169 aa17.33■□□□□ 0.36
PTCHD3P2-201ENST00000424937 PUSL1Q8N0Z8 303 aaKnown RBP17.33■□□□□ 0.36
PTCHD3P2-201ENST00000424937 FCAMRQ8WWV6 532 aa17.33■□□□□ 0.36
PTCHD3P2-201ENST00000424937 DIRAS2Q96HU8 199 aa17.33■□□□□ 0.36
PTCHD3P2-201ENST00000424937 TMEM68Q96MH6 324 aa17.33■□□□□ 0.36
PTCHD3P2-201ENST00000424937 SLIRPQ9GZT3 109 aaKnown RBP17.33■□□□□ 0.36
PTCHD3P2-201ENST00000424937 ALX4Q9H161 411 aaPredicted RBP17.33■□□□□ 0.36
PTCHD3P2-201ENST00000424937 H3BUA1 57 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms