RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 ZDHHC16Q969W1 377 aa10.76□□□□□ -0.69
PRPF39-202ENST00000424478 FLYWCH2Q96CP2 140 aaKnown RBP10.76□□□□□ -0.69
PRPF39-202ENST00000424478 R3HDM4Q96D70 268 aa10.76□□□□□ -0.69
PRPF39-202ENST00000424478 MARCH11A6NNE9 402 aa10.75□□□□□ -0.69
PRPF39-202ENST00000424478 NCBP2LA6PVI3 153 aaKnown RBP10.75□□□□□ -0.69
PRPF39-202ENST00000424478 HOXA3O43365 443 aaPredicted RBP10.75□□□□□ -0.69
PRPF39-202ENST00000424478 IL5P05113 134 aa10.75□□□□□ -0.69
PRPF39-202ENST00000424478 RTL8BQ17RB0 113 aa10.75□□□□□ -0.69
PRPF39-202ENST00000424478 C11orf88Q6PI97 169 aa10.75□□□□□ -0.69
PRPF39-202ENST00000424478 OR10C1Q96KK4 312 aa10.75□□□□□ -0.69
PRPF39-202ENST00000424478 PHB2Q99623 299 aa10.75□□□□□ -0.69
PRPF39-202ENST00000424478 FBXL15Q9H469 300 aa10.75□□□□□ -0.69
PRPF39-202ENST00000424478 GPN1Q9HCN4 374 aaPredicted RBP10.75□□□□□ -0.69
PRPF39-202ENST00000424478 RNF212BA8MTL3 300 aa10.75□□□□□ -0.69
PRPF39-202ENST00000424478 MMDQ15546 238 aa10.75□□□□□ -0.69
PRPF39-202ENST00000424478 OR4S2Q8NH73 311 aa10.75□□□□□ -0.69
PRPF39-202ENST00000424478 RHOVQ96L33 236 aa10.75□□□□□ -0.69
PRPF39-202ENST00000424478 MGAT4CQ9UBM8 478 aa10.75□□□□□ -0.69
PRPF39-202ENST00000424478 SMLR1H3BR10 107 aa10.75□□□□□ -0.69
PRPF39-202ENST00000424478 OR9G9P0C7N8 305 aa10.75□□□□□ -0.69
PRPF39-202ENST00000424478 SAA1P0DJI8 122 aaPredicted RBP10.75□□□□□ -0.69
PRPF39-202ENST00000424478 ANXA3P12429 323 aa10.75□□□□□ -0.69
PRPF39-202ENST00000424478 H2BFSP57053 126 aa10.75□□□□□ -0.69
PRPF39-202ENST00000424478 C10orf55Q5SWW7 151 aa10.75□□□□□ -0.69
PRPF39-202ENST00000424478 GGNBP1Q5YKI7 109 aa10.75□□□□□ -0.69
PRPF39-202ENST00000424478 RBPMSQ93062 196 aaKnown RBP10.75□□□□□ -0.69
PRPF39-202ENST00000424478 GSKIPQ9P0R6 139 aa10.75□□□□□ -0.69
PRPF39-202ENST00000424478 FCN1O00602 326 aa10.74□□□□□ -0.69
PRPF39-202ENST00000424478 TMEM11P17152 192 aa10.74□□□□□ -0.69
PRPF39-202ENST00000424478 RAG2P55895 527 aa10.74□□□□□ -0.69
PRPF39-202ENST00000424478 CD83Q01151 205 aa10.74□□□□□ -0.69
PRPF39-202ENST00000424478 OR8H3Q8N146 312 aa10.74□□□□□ -0.69
PRPF39-202ENST00000424478 MED28Q9H204 178 aa10.74□□□□□ -0.69
PRPF39-202ENST00000424478 LRRC37A5PQ49AS3 106 aa10.74□□□□□ -0.69
PRPF39-202ENST00000424478 FOXRED2Q8IWF2 684 aa10.74□□□□□ -0.69
PRPF39-202ENST00000424478 COQ8AQ8NI60 647 aa10.74□□□□□ -0.69
PRPF39-202ENST00000424478 GPR146Q96CH1 333 aa10.74□□□□□ -0.69
PRPF39-202ENST00000424478 C5orf51A6NDU8 294 aa10.73□□□□□ -0.69
PRPF39-202ENST00000424478 PRAF2O60831 178 aa10.73□□□□□ -0.69
PRPF39-202ENST00000424478 IGLV2-23P01705 113 aa10.73□□□□□ -0.69
PRPF39-202ENST00000424478 GNB1P62873 340 aa10.73□□□□□ -0.69
PRPF39-202ENST00000424478 OR4A47Q6IF82 309 aa10.73□□□□□ -0.69
PRPF39-202ENST00000424478 CCDC144NLQ6NUI1 221 aa10.73□□□□□ -0.69
PRPF39-202ENST00000424478 LGI3Q8N145 548 aa10.73□□□□□ -0.69
PRPF39-202ENST00000424478 ADTRPQ96IZ2 230 aa10.73□□□□□ -0.69
PRPF39-202ENST00000424478 TMEM140Q9NV12 185 aa10.73□□□□□ -0.69
PRPF39-202ENST00000424478 CHST1O43916 411 aa10.73□□□□□ -0.69
PRPF39-202ENST00000424478 HPRT1P00492 218 aa10.73□□□□□ -0.69
PRPF39-202ENST00000424478 FAM71F2Q6NXP2 309 aa10.73□□□□□ -0.69
PRPF39-202ENST00000424478 Q6ZS46 218 aa10.73□□□□□ -0.69
PRPF39-202ENST00000424478 OR4C13Q8NGP0 309 aa10.73□□□□□ -0.69
PRPF39-202ENST00000424478 TMEM56Q96MV1 263 aa10.73□□□□□ -0.69
PRPF39-202ENST00000424478 CACNG5Q9UF02 275 aa10.73□□□□□ -0.69
PRPF39-202ENST00000424478 TMEM56-RWDD3S4R434 201 aa10.73□□□□□ -0.69
PRPF39-202ENST00000424478 ATRQ13535 2644 aa10.73□□□□□ -0.69
PRPF39-202ENST00000424478 RBMXL2O75526 392 aaKnown RBP10.73□□□□□ -0.69
PRPF39-202ENST00000424478 SRD5A1P18405 259 aa10.73□□□□□ -0.69
PRPF39-202ENST00000424478 RRAS2P62070 204 aaPredicted RBP10.73□□□□□ -0.69
PRPF39-202ENST00000424478 LRRC75BQ2VPJ9 315 aa10.73□□□□□ -0.69
PRPF39-202ENST00000424478 PDPNQ86YL7 162 aa10.73□□□□□ -0.69
PRPF39-202ENST00000424478 ESM1Q9NQ30 184 aa10.73□□□□□ -0.69
PRPF39-202ENST00000424478 C2CD3Q4AC94 2353 aa10.72□□□□□ -0.69
PRPF39-202ENST00000424478 SNRPGP15A8MWD9 76 aa10.72□□□□□ -0.69
PRPF39-202ENST00000424478 SCGB1D2O95969 90 aa10.72□□□□□ -0.69
PRPF39-202ENST00000424478 MOSP00540 346 aa10.72□□□□□ -0.69
PRPF39-202ENST00000424478 PLGLAQ15195 96 aa10.72□□□□□ -0.69
PRPF39-202ENST00000424478 MSMO1Q15800 293 aa10.72□□□□□ -0.69
PRPF39-202ENST00000424478 MAGT1Q9H0U3 335 aa10.72□□□□□ -0.69
PRPF39-202ENST00000424478 MEGF9Q9H1U4 602 aa10.72□□□□□ -0.69
PRPF39-202ENST00000424478 RANBP3Q9H6Z4 567 aaPredicted RBP10.72□□□□□ -0.69
PRPF39-202ENST00000424478 METTL1Q9UBP6 276 aaKnown RBP10.72□□□□□ -0.69
PRPF39-202ENST00000424478 E7EUB6 86 aa10.72□□□□□ -0.69
PRPF39-202ENST00000424478 TXNL1O43396 289 aa10.72□□□□□ -0.69
PRPF39-202ENST00000424478 KCNAB3O43448 404 aa10.72□□□□□ -0.69
PRPF39-202ENST00000424478 OR2F2O95006 317 aa10.72□□□□□ -0.69
PRPF39-202ENST00000424478 CD1BP29016 333 aa10.72□□□□□ -0.69
PRPF39-202ENST00000424478 HABP2Q14520 560 aaPredicted RBP10.72□□□□□ -0.69
PRPF39-202ENST00000424478 Q5BKY6 102 aa10.72□□□□□ -0.69
PRPF39-202ENST00000424478 FAM103A1Q9BTL3 118 aaKnown RBP10.72□□□□□ -0.69
PRPF39-202ENST00000424478 NQO2P16083 231 aa10.71□□□□□ -0.69
PRPF39-202ENST00000424478 BRS3P32247 399 aa10.71□□□□□ -0.69
PRPF39-202ENST00000424478 MC5RP33032 325 aa10.71□□□□□ -0.69
PRPF39-202ENST00000424478 PSG5Q15238 335 aa10.71□□□□□ -0.69
PRPF39-202ENST00000424478 TMEM177Q53S58 311 aa10.71□□□□□ -0.69
PRPF39-202ENST00000424478 H2BFWTQ7Z2G1 175 aa10.71□□□□□ -0.69
PRPF39-202ENST00000424478 RRNAD1Q96FB5 475 aaKnown RBP10.71□□□□□ -0.69
PRPF39-202ENST00000424478 FYTTD1Q96QD9 318 aaKnown RBP10.71□□□□□ -0.69
PRPF39-202ENST00000424478 HINT2Q9BX68 163 aa10.71□□□□□ -0.69
PRPF39-202ENST00000424478 PLEKHA2Q9HB19 425 aa10.71□□□□□ -0.69
PRPF39-202ENST00000424478 LINC00527Q9UJ94 153 aa10.71□□□□□ -0.69
PRPF39-202ENST00000424478 LINC01548A6NM66 108 aa10.71□□□□□ -0.69
PRPF39-202ENST00000424478 FAM106CPP0CH98 169 aa10.71□□□□□ -0.69
PRPF39-202ENST00000424478 HNF1AP20823 631 aa10.71□□□□□ -0.69
PRPF39-202ENST00000424478 IER3P46695 156 aa10.71□□□□□ -0.69
PRPF39-202ENST00000424478 BCAP31P51572 246 aa10.71□□□□□ -0.69
PRPF39-202ENST00000424478 IAH1Q2TAA2 248 aaPredicted RBP10.71□□□□□ -0.69
PRPF39-202ENST00000424478 CXorf66Q5JRM2 361 aaPredicted RBP10.71□□□□□ -0.69
PRPF39-202ENST00000424478 OR2T10Q8NGZ9 312 aa10.71□□□□□ -0.69
PRPF39-202ENST00000424478 PLSCR3Q9NRY6 295 aa10.71□□□□□ -0.69
PRPF39-202ENST00000424478 FAM90A9PA6NNJ1 464 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms