RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 CXCL1P09341 107 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 GPX3P22352 226 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 GADD45AP24522 165 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 PPP1CBP62140 327 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 PNRC1Q12796 327 aaPredicted RBP2.31□□□□□ -2.04
PMS1-209ENST00000424059 ELOBQ15370 118 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 DUSP5Q16690 384 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 GSG1Q2KHT4 349 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 FHL5Q5TD97 284 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 LEG1Q6P5S2 330 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 C19orf48Q6RUI8 117 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 Q6ZN92 141 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 Q6ZUT4 128 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 Q71RC1 249 aaPredicted RBP2.31□□□□□ -2.04
PMS1-209ENST00000424059 TRPT1Q86TN4 253 aaKnown RBP2.31□□□□□ -2.04
PMS1-209ENST00000424059 GAPTQ8N292 157 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 KCNRGQ8N5I3 272 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 NPWQ8N729 165 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 OR52R1Q8NGF1 315 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 CNIH3Q8TBE1 160 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 OR51E1Q8TCB6 317 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 SSMEM1Q8WWF3 244 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 ARPC1AQ92747 370 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 FRG2BQ96QU4 278 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 ZNF471Q9BX82 626 aaPredicted RBP2.31□□□□□ -2.04
PMS1-209ENST00000424059 TMEM59Q9BXS4 323 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 CXXC4Q9H2H0 198 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 GLIPR2Q9H4G4 154 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 RBM22Q9NW64 420 aaKnown RBP eCLIP2.31□□□□□ -2.041e-7■■■■■ 30.3
PMS1-209ENST00000424059 TVP23BQ9NYZ1 205 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 RARRES3Q9UL19 164 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 NSG2Q9Y328 171 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 MED31Q9Y3C7 131 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 PAM16Q9Y3D7 125 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 CRB1P82279 1406 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 DIP2BQ9P265 1576 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 TCF20Q9UGU0 1960 aaKnown RBP2.31□□□□□ -2.04
PMS1-209ENST00000424059 A2ML1A8K2U0 1454 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 DOCK3Q8IZD9 2030 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 RIMBP3CA6NJZ7 1639 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 RIMBP3BA6NNM3 1639 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 NFAT5O94916 1531 aa2.31□□□□□ -2.04
PMS1-209ENST00000424059 TRGV10A0A0A0MS01 117 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 A0A1W2PP11 408 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 MYBPHLA2RUH7 354 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 A6NDN8 102 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 GGT3PA6NGU5 568 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 GGTLC3B5MD39 225 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 OVOL1O14753 267 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 NDUFB4O95168 129 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 LSM8O95777 96 aaKnown RBP2.3□□□□□ -2.04
PMS1-209ENST00000424059 CXorf1O96002 111 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 TNFP01375 233 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 PGA4P0DJD7 388 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 PGA5P0DJD9 388 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 PSMB9P28065 219 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 RBM11P57052 281 aaKnown RBP2.3□□□□□ -2.04
PMS1-209ENST00000424059 OSTNP61366 133 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 RND3P61587 244 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 RPS4XP62701 263 aaKnown RBP2.3□□□□□ -2.04
PMS1-209ENST00000424059 CLEC12BQ2HXU8 276 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 MRGPRG-AS1Q2M3A8 158 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 CEACAM16Q2WEN9 425 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 KRTAP24-1Q3LI83 254 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 TCEAL5Q5H9L2 206 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 IBA57Q5T440 356 aaKnown RBP2.3□□□□□ -2.04
PMS1-209ENST00000424059 ZNF730Q6ZMV8 503 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 C9orf139Q6ZV77 190 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 ZNF534Q76KX8 674 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 ZNF695Q8IW36 515 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 PRR22Q8IZ63 422 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 RYBPQ8N488 228 aaPredicted RBP2.3□□□□□ -2.04
PMS1-209ENST00000424059 KLHDC1Q8N7A1 406 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 TEX45Q8NA69 505 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 THAP8Q8NA92 274 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 OR4F17Q8NGA8 305 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 STARD4Q96DR4 205 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 OR4F4Q96R69 305 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 MRPL45Q9BRJ2 306 aaKnown RBP2.3□□□□□ -2.04
PMS1-209ENST00000424059 SNRNP25Q9BV90 132 aaKnown RBP2.3□□□□□ -2.04
PMS1-209ENST00000424059 ULBP3Q9BZM4 244 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 CHST6Q9GZX3 395 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 ZNF665Q9H7R5 613 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 UBE2TQ9NPD8 197 aaPredicted RBP2.3□□□□□ -2.04
PMS1-209ENST00000424059 TMEM9BQ9NQ34 198 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 PARP11Q9NR21 331 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 NWD1Q149M9 1564 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 VWDEQ8N2E2 1590 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 SPHKAPQ2M3C7 1700 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 MARF1Q9Y4F3 1742 aaKnown RBP2.3□□□□□ -2.04
PMS1-209ENST00000424059 ZCCHC11Q5TAX3 1644 aaKnown RBP2.3□□□□□ -2.04
PMS1-209ENST00000424059 CUL7Q14999 1698 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 ARHGAP5Q13017 1502 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 TRAV5A0A0B4J249 113 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 C5orf63A6NC05 138 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 NCBP2LA6PVI3 153 aaKnown RBP2.3□□□□□ -2.04
PMS1-209ENST00000424059 K7EQS6 105 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 GEMIN2O14893 280 aaKnown RBP2.3□□□□□ -2.04
PMS1-209ENST00000424059 BUB3O43684 328 aa2.3□□□□□ -2.04
PMS1-209ENST00000424059 GRAP2O75791 330 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms