RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 VSIG4Q9Y279 399 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 FBXO7Q9Y3I1 522 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 NUBP2Q9Y5Y2 271 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 VWFP04275 2813 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 SRRM4A7MD48 611 aaKnown RBP8.54□□□□□ -1.04
USP49-204ENST00000423567 CCL24O00175 119 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 SULT1C2O00338 296 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 RGS5O15539 181 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 TNFSF12O43508 249 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 IGLV2-14P01704 120 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 CRYGBP07316 175 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 IGLL1P15814 213 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 NAT1P18440 290 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 HLA-DMAP28067 261 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 RCVRNP35243 200 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 RFX2P48378 723 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 TSPAN5P62079 268 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 DYRK1AQ13627 763 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 TNXAQ16473 311 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 BEAN1Q3B7T3 259 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 ETV3LQ6ZN32 361 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 LINC00482Q8N8I6 264 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 ZNF491Q8N8L2 437 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 POC5Q8NA72 575 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 OR6F1Q8NGZ6 308 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 VSTM2AQ8TAG5 236 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 RAX2Q96IS3 184 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 AIFM2Q9BRQ8 373 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 ZNF2Q9BSG1 426 aaPredicted RBP8.54□□□□□ -1.04
USP49-204ENST00000423567 KLK15Q9H2R5 256 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 SLA2Q9H6Q3 261 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 ZNF355PQ9NSJ1 428 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 EXTL2Q9UBQ6 330 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 SCOCQ9UIL1 159 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 ANAPC10Q9UM13 185 aa8.54□□□□□ -1.04
USP49-204ENST00000423567 ARPC1BO15143 372 aaKnown RBP8.53□□□□□ -1.04
USP49-204ENST00000423567 MPPED1O15442 326 aa8.53□□□□□ -1.04
USP49-204ENST00000423567 TPPPO94811 219 aa8.53□□□□□ -1.04
USP49-204ENST00000423567 HRASP01112 189 aa8.53□□□□□ -1.04
USP49-204ENST00000423567 SAA1P0DJI8 122 aaPredicted RBP8.53□□□□□ -1.04
USP49-204ENST00000423567 EGR2P11161 476 aaPredicted RBP8.53□□□□□ -1.04
USP49-204ENST00000423567 S100GP29377 79 aa8.53□□□□□ -1.04
USP49-204ENST00000423567 HRH1P35367 487 aa8.53□□□□□ -1.04
USP49-204ENST00000423567 RPL30P62888 115 aaKnown RBP8.53□□□□□ -1.04
USP49-204ENST00000423567 PJVKQ0ZLH3 352 aa8.53□□□□□ -1.04
USP49-204ENST00000423567 SPCS2Q15005 226 aa8.53□□□□□ -1.04
USP49-204ENST00000423567 PRSS8Q16651 343 aa8.53□□□□□ -1.04
USP49-204ENST00000423567 DEFB136Q30KP8 78 aa8.53□□□□□ -1.04
USP49-204ENST00000423567 PDLIM3Q53GG5 364 aaPredicted RBP8.53□□□□□ -1.04
USP49-204ENST00000423567 C19orf54Q5BKX5 351 aa8.53□□□□□ -1.04
USP49-204ENST00000423567 KPRPQ5T749 579 aaPredicted RBP8.53□□□□□ -1.04
USP49-204ENST00000423567 AADACL3Q5VUY0 350 aa8.53□□□□□ -1.04
USP49-204ENST00000423567 DHRS11Q6UWP2 260 aa8.53□□□□□ -1.04
USP49-204ENST00000423567 REC114Q7Z4M0 266 aa8.53□□□□□ -1.04
USP49-204ENST00000423567 MMD2Q8IY49 270 aa8.53□□□□□ -1.04
USP49-204ENST00000423567 CMTM1Q8IZ96 169 aa8.53□□□□□ -1.04
USP49-204ENST00000423567 OR11H1Q8NG94 326 aa8.53□□□□□ -1.04
USP49-204ENST00000423567 MYOZ3Q8TDC0 251 aa8.53□□□□□ -1.04
USP49-204ENST00000423567 MOB3AQ96BX8 217 aa8.53□□□□□ -1.04
USP49-204ENST00000423567 DUX3Q96PT4 197 aa8.53□□□□□ -1.04
USP49-204ENST00000423567 P2RX4Q99571 388 aa8.53□□□□□ -1.04
USP49-204ENST00000423567 H3BUA1 57 aa8.52□□□□□ -1.05
USP49-204ENST00000423567 TRGV3P03979 118 aa8.52□□□□□ -1.05
USP49-204ENST00000423567 TPPP2P59282 170 aa8.52□□□□□ -1.05
USP49-204ENST00000423567 EIF4EBP1Q13541 118 aaPredicted RBP8.52□□□□□ -1.05
USP49-204ENST00000423567 IDO2Q6ZQW0 420 aa8.52□□□□□ -1.05
USP49-204ENST00000423567 ZNF818PQ6ZRF7 136 aa8.52□□□□□ -1.05
USP49-204ENST00000423567 SPAG16Q8N0X2 631 aa8.52□□□□□ -1.05
USP49-204ENST00000423567 OR1N2Q8NGR9 330 aa8.52□□□□□ -1.05
USP49-204ENST00000423567 CD300LFQ8TDQ1 290 aa8.52□□□□□ -1.05
USP49-204ENST00000423567 MS4A10Q96PG2 267 aa8.52□□□□□ -1.05
USP49-204ENST00000423567 OR5B12Q96R08 314 aa8.52□□□□□ -1.05
USP49-204ENST00000423567 SPIN2AQ99865 258 aa8.52□□□□□ -1.05
USP49-204ENST00000423567 SPIN2BQ9BPZ2 258 aa8.52□□□□□ -1.05
USP49-204ENST00000423567 CCDC59Q9P031 241 aaKnown RBP8.52□□□□□ -1.05
USP49-204ENST00000423567 MEGF8Q7Z7M0 2845 aa8.52□□□□□ -1.05
USP49-204ENST00000423567 A0A0G2JLM5 398 aa8.51□□□□□ -1.05
USP49-204ENST00000423567 C13orf42A0A1B0GVH6 325 aa8.51□□□□□ -1.05
USP49-204ENST00000423567 MSGN1A6NI15 193 aa8.51□□□□□ -1.05
USP49-204ENST00000423567 RBFOX2O43251 390 aaKnown RBP eCLIP8.51□□□□□ -1.05
USP49-204ENST00000423567 SOX15O60248 233 aa8.51□□□□□ -1.05
USP49-204ENST00000423567 KBTBD11O94819 623 aa8.51□□□□□ -1.05
USP49-204ENST00000423567 OR2A4O95047 310 aa8.51□□□□□ -1.05
USP49-204ENST00000423567 HPRT1P00492 218 aa8.51□□□□□ -1.05
USP49-204ENST00000423567 IFNA6P05013 189 aa8.51□□□□□ -1.05
USP49-204ENST00000423567 OR8U8P0C7N1 319 aa8.51□□□□□ -1.05
USP49-204ENST00000423567 RUNX1Q01196 453 aa8.51□□□□□ -1.05
USP49-204ENST00000423567 ZNF616Q08AN1 781 aa8.51□□□□□ -1.05
USP49-204ENST00000423567 RNASE12Q5GAN4 147 aaKnown RBP8.51□□□□□ -1.05
USP49-204ENST00000423567 LPCAT3Q6P1A2 487 aa8.51□□□□□ -1.05
USP49-204ENST00000423567 LYSMD2Q8IV50 215 aa8.51□□□□□ -1.05
USP49-204ENST00000423567 OR5T1Q8NG75 326 aa8.51□□□□□ -1.05
USP49-204ENST00000423567 OR51H1Q8NH63 302 aa8.51□□□□□ -1.05
USP49-204ENST00000423567 CASTOR1Q8WTX7 329 aa8.51□□□□□ -1.05
USP49-204ENST00000423567 FCAMRQ8WWV6 532 aa8.51□□□□□ -1.05
USP49-204ENST00000423567 SRSF12Q8WXF0 261 aaKnown RBP8.51□□□□□ -1.05
USP49-204ENST00000423567 RHOVQ96L33 236 aa8.51□□□□□ -1.05
USP49-204ENST00000423567 OR2A7Q96R45 310 aa8.51□□□□□ -1.05
USP49-204ENST00000423567 GPHA2Q96T91 129 aa8.51□□□□□ -1.05
USP49-204ENST00000423567 ZNF430Q9H8G1 570 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms