RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 IL18Q14116 193 aa11.76□□□□□ -0.53
USB1-202ENST00000423271 UNQ5815/PRO19632Q6UWF5 114 aa11.76□□□□□ -0.53
USB1-202ENST00000423271 PDPNQ86YL7 162 aa11.76□□□□□ -0.53
USB1-202ENST00000423271 LYSMD2Q8IV50 215 aa11.76□□□□□ -0.53
USB1-202ENST00000423271 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.76□□□□□ -0.53
USB1-202ENST00000423271 TSNAXQ99598 290 aaKnown RBP11.76□□□□□ -0.53
USB1-202ENST00000423271 SLC35D1Q9NTN3 355 aa11.76□□□□□ -0.53
USB1-202ENST00000423271 EHFQ9NZC4 300 aa11.76□□□□□ -0.53
USB1-202ENST00000423271 ARPC1BO15143 372 aaKnown RBP11.75□□□□□ -0.53
USB1-202ENST00000423271 SLC25A17O43808 307 aa11.75□□□□□ -0.53
USB1-202ENST00000423271 RAMP3O60896 148 aa11.75□□□□□ -0.53
USB1-202ENST00000423271 SPDEFO95238 335 aa11.75□□□□□ -0.53
USB1-202ENST00000423271 RCVRNP35243 200 aa11.75□□□□□ -0.53
USB1-202ENST00000423271 RFX2P48378 723 aa11.75□□□□□ -0.53
USB1-202ENST00000423271 SLURP1P55000 103 aa11.75□□□□□ -0.53
USB1-202ENST00000423271 TAS2R46P59540 309 aa11.75□□□□□ -0.53
USB1-202ENST00000423271 SSBP2P81877 361 aaPredicted RBP11.75□□□□□ -0.53
USB1-202ENST00000423271 ACTBL2Q562R1 376 aa11.75□□□□□ -0.53
USB1-202ENST00000423271 VAX1Q5SQQ9 334 aa11.75□□□□□ -0.53
USB1-202ENST00000423271 PYHIN1Q6K0P9 492 aa11.75□□□□□ -0.53
USB1-202ENST00000423271 ZNF562Q6V9R5 426 aa11.75□□□□□ -0.53
USB1-202ENST00000423271 TCTEX1D1Q8N7M0 179 aa11.75□□□□□ -0.53
USB1-202ENST00000423271 LFNGQ8NES3 379 aa11.75□□□□□ -0.53
USB1-202ENST00000423271 OR5H2Q8NGV7 314 aa11.75□□□□□ -0.53
USB1-202ENST00000423271 C15orf40Q8WUR7 153 aa11.75□□□□□ -0.53
USB1-202ENST00000423271 DCUN1D4Q92564 292 aa11.75□□□□□ -0.53
USB1-202ENST00000423271 KLK11Q9UBX7 282 aa11.75□□□□□ -0.53
USB1-202ENST00000423271 ZMAT5Q9UDW3 170 aaKnown RBP11.75□□□□□ -0.53
USB1-202ENST00000423271 SORL1Q92673 2214 aa11.74□□□□□ -0.53
USB1-202ENST00000423271 IGHV4OR15-8A0A075B7B6 117 aa11.74□□□□□ -0.53
USB1-202ENST00000423271 A0A087WW49 117 aa11.74□□□□□ -0.53
USB1-202ENST00000423271 PPYP01298 95 aa11.74□□□□□ -0.53
USB1-202ENST00000423271 IGLV2-23P01705 113 aa11.74□□□□□ -0.53
USB1-202ENST00000423271 IGHV3-11P01762 117 aa11.74□□□□□ -0.53
USB1-202ENST00000423271 LGALS1P09382 135 aaKnown RBP11.74□□□□□ -0.53
USB1-202ENST00000423271 HRH1P35367 487 aa11.74□□□□□ -0.53
USB1-202ENST00000423271 TMEM267Q0VDI3 215 aaPredicted RBP11.74□□□□□ -0.53
USB1-202ENST00000423271 DYRK1AQ13627 763 aa11.74□□□□□ -0.53
USB1-202ENST00000423271 OVCH2Q7RTZ1 564 aa11.74□□□□□ -0.53
USB1-202ENST00000423271 GRPEL2Q8TAA5 225 aa11.74□□□□□ -0.53
USB1-202ENST00000423271 FCAMRQ8WWV6 532 aa11.74□□□□□ -0.53
USB1-202ENST00000423271 ARPC1AQ92747 370 aa11.74□□□□□ -0.53
USB1-202ENST00000423271 FLYWCH2Q96CP2 140 aaKnown RBP11.74□□□□□ -0.53
USB1-202ENST00000423271 MS4A10Q96PG2 267 aa11.74□□□□□ -0.53
USB1-202ENST00000423271 SOSTQ9BQB4 213 aa11.74□□□□□ -0.53
USB1-202ENST00000423271 MTFP1Q9UDX5 166 aa11.74□□□□□ -0.53
USB1-202ENST00000423271 LSM4Q9Y4Z0 139 aaKnown RBP11.74□□□□□ -0.53
USB1-202ENST00000423271 RYR3Q15413 4870 aa11.73□□□□□ -0.53
USB1-202ENST00000423271 GABARAPH6UMI1 98 aa11.73□□□□□ -0.53
USB1-202ENST00000423271 CTDSPLO15194 276 aa11.73□□□□□ -0.53
USB1-202ENST00000423271 IGLV2-14P01704 120 aa11.73□□□□□ -0.53
USB1-202ENST00000423271 FXYD4P59646 89 aa11.73□□□□□ -0.53
USB1-202ENST00000423271 MRPS10P82664 201 aaKnown RBP11.73□□□□□ -0.53
USB1-202ENST00000423271 PJVKQ0ZLH3 352 aa11.73□□□□□ -0.53
USB1-202ENST00000423271 DCTN2Q13561 401 aaKnown RBP11.73□□□□□ -0.53
USB1-202ENST00000423271 FXYD3Q14802 87 aa11.73□□□□□ -0.53
USB1-202ENST00000423271 AKIRIN2Q53H80 203 aa11.73□□□□□ -0.53
USB1-202ENST00000423271 ZNF645Q8N7E2 425 aa11.73□□□□□ -0.53
USB1-202ENST00000423271 SMIM4Q8WVI0 70 aa11.73□□□□□ -0.53
USB1-202ENST00000423271 SECTM1Q8WVN6 248 aa11.73□□□□□ -0.53
USB1-202ENST00000423271 GIMAP1Q8WWP7 306 aa11.73□□□□□ -0.53
USB1-202ENST00000423271 DLX4Q92988 240 aaPredicted RBP11.73□□□□□ -0.53
USB1-202ENST00000423271 HARBI1Q96MB7 349 aa11.73□□□□□ -0.53
USB1-202ENST00000423271 RABL2AQ9UBK7 228 aaPredicted RBP11.73□□□□□ -0.53
USB1-202ENST00000423271 RABL2BQ9UNT1 228 aa11.73□□□□□ -0.53
USB1-202ENST00000423271 FABP12A6NFH5 140 aa11.72□□□□□ -0.53
USB1-202ENST00000423271 A6NHS1 94 aa11.72□□□□□ -0.53
USB1-202ENST00000423271 LINC01619G3V211 115 aa11.72□□□□□ -0.53
USB1-202ENST00000423271 M0QYG6 137 aa11.72□□□□□ -0.53
USB1-202ENST00000423271 OVOL1O14753 267 aa11.72□□□□□ -0.53
USB1-202ENST00000423271 CRYGBP07316 175 aa11.72□□□□□ -0.53
USB1-202ENST00000423271 S100A5P33763 92 aa11.72□□□□□ -0.53
USB1-202ENST00000423271 TPPP2P59282 170 aa11.72□□□□□ -0.53
USB1-202ENST00000423271 BVESQ8NE79 360 aa11.72□□□□□ -0.53
USB1-202ENST00000423271 ZNF2Q9BSG1 426 aaPredicted RBP11.72□□□□□ -0.53
USB1-202ENST00000423271 CCL28Q9NRJ3 127 aa11.72□□□□□ -0.53
USB1-202ENST00000423271 ZNF256Q9Y2P7 627 aaPredicted RBP11.72□□□□□ -0.53
USB1-202ENST00000423271 RBMX2Q9Y388 322 aaKnown RBP11.72□□□□□ -0.53
USB1-202ENST00000423271 TNCP24821 2201 aa11.72□□□□□ -0.53
USB1-202ENST00000423271 SRRM4A7MD48 611 aaKnown RBP11.71□□□□□ -0.53
USB1-202ENST00000423271 LINC00473A8K010 186 aa11.71□□□□□ -0.53
USB1-202ENST00000423271 SLC22A5O76082 557 aa11.71□□□□□ -0.53
USB1-202ENST00000423271 TRGV3P03979 118 aa11.71□□□□□ -0.53
USB1-202ENST00000423271 CD3DP04234 171 aa11.71□□□□□ -0.53
USB1-202ENST00000423271 DUTP33316 252 aaKnown RBP11.71□□□□□ -0.53
USB1-202ENST00000423271 HERV-K104P61576 105 aa11.71□□□□□ -0.53
USB1-202ENST00000423271 DHRS11Q6UWP2 260 aa11.71□□□□□ -0.53
USB1-202ENST00000423271 TMEM17Q86X19 198 aa11.71□□□□□ -0.53
USB1-202ENST00000423271 OR6Q1Q8NGQ2 317 aa11.71□□□□□ -0.53
USB1-202ENST00000423271 SLC5A7Q9GZV3 580 aa11.71□□□□□ -0.53
USB1-202ENST00000423271 FXYD6Q9H0Q3 95 aa11.71□□□□□ -0.53
USB1-202ENST00000423271 V9GYH0 126 aa11.71□□□□□ -0.53
USB1-202ENST00000423271 TENM3Q9P273 2699 aa11.71□□□□□ -0.54
USB1-202ENST00000423271 DNAH7Q8WXX0 4024 aa11.7□□□□□ -0.54
USB1-202ENST00000423271 SHOXO15266 292 aa11.7□□□□□ -0.54
USB1-202ENST00000423271 SAP30O75446 220 aa11.7□□□□□ -0.54
USB1-202ENST00000423271 CNIH1O95406 144 aa11.7□□□□□ -0.54
USB1-202ENST00000423271 LY86O95711 162 aa11.7□□□□□ -0.54
USB1-202ENST00000423271 LGALS7P47929 136 aa11.7□□□□□ -0.54
USB1-202ENST00000423271 INSL3P51460 131 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms