RNA–Protein interactions for RNA: ENST00000422491.6

USP54-204, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 1 (best) BASIC

Gene USP54, Length 2,777 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-204ENST00000422491 RAB29O14966 203 aa8.94□□□□□ -0.98
USP54-204ENST00000422491 ZNF324O75467 553 aaPredicted RBP8.94□□□□□ -0.98
USP54-204ENST00000422491 CXorf1O96002 111 aa8.94□□□□□ -0.98
USP54-204ENST00000422491 REG1AP05451 166 aa8.94□□□□□ -0.98
USP54-204ENST00000422491 OR8I2Q8N0Y5 310 aa8.94□□□□□ -0.98
USP54-204ENST00000422491 ZNF738Q8NE65 137 aa8.94□□□□□ -0.98
USP54-204ENST00000422491 TSTD1Q8NFU3 115 aa8.94□□□□□ -0.98
USP54-204ENST00000422491 OR10D3Q8NH80 312 aa8.94□□□□□ -0.98
USP54-204ENST00000422491 C11orf52Q96A22 123 aa8.94□□□□□ -0.98
USP54-204ENST00000422491 TUBG2Q9NRH3 451 aa8.94□□□□□ -0.98
USP54-204ENST00000422491 RARRES3Q9UL19 164 aa8.94□□□□□ -0.98
USP54-204ENST00000422491 LY96Q9Y6Y9 160 aa8.94□□□□□ -0.98
USP54-204ENST00000422491 LOC102723996A0A087X1L8 192 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 IGHV2OR16-5A0A0B4J2B6 119 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 ZNF503-AS2A6NEH8 195 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 DPRXA6NFQ7 191 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 FAM166BA8MTA8 275 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 C17orf98A8MV24 154 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 CLDN14O95500 239 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 MT-ND6P03923 174 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 PMCHP20382 165 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 OPRK1P41145 380 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 GNG3P63215 75 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 TGFBR3Q03167 851 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 KLHDC1Q8N7A1 406 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 ZBTB34Q8NCN2 500 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 ABHD3Q8WU67 409 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 EAF1Q96JC9 268 aaPredicted RBP8.93□□□□□ -0.98
USP54-204ENST00000422491 PKIBQ9C010 78 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 WNT10AQ9GZT5 417 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 OR2D2Q9H210 308 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 CABIN1Q9Y6J0 2220 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 ESPL1Q14674 2120 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 NCKAP5O14513 1909 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 IGHV1-45A0A0A0MS14 117 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 IGHV2-70DA0A0C4DH43 119 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 OR5B21A6NL26 309 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 NEURL1O76050 574 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 OR2H2O95918 312 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 HINT1P49773 126 aaPredicted RBP8.93□□□□□ -0.98
USP54-204ENST00000422491 SSR4P51571 173 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 GFRA1P56159 465 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 TMEM136Q6ZRR5 245 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 MCEMP1Q8IX19 187 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 IMMP1LQ96LU5 166 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 UHRF2Q96PU4 802 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 DEPPQ9NTK1 212 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 NAT8BQ9UHF3 227 aa8.93□□□□□ -0.98
USP54-204ENST00000422491 A0A096LPE4 126 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 TRGV10A0A0A0MS01 117 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 IGHV2-26A0A0B4J1V2 119 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 A0A0G2JMM0 328 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 A0A1W2PPB8 328 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 A0A1W2PPZ6 126 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 A0A1W2PRS3 328 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 KIR3DP1A8MWS1 328 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 A8MXE2 369 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 MPDU1O75352 247 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 SRD5A2P31213 254 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 CX3CL1P78423 397 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 ARF1P84077 181 aaKnown RBP8.92□□□□□ -0.98
USP54-204ENST00000422491 IGFBP7Q16270 282 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 SPATA46Q5T0L3 261 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 TREML4Q6UXN2 200 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 TCTEX1D1Q8N7M0 179 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 POM121L2Q96KW2 1035 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 HTD2P86397 168 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 MAJINQ3KP22 176 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 KIAA1644Q3SXP7 199 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 WDR73Q6P4I2 378 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 H2BFWTQ7Z2G1 175 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 ZNF808Q8N4W9 903 aaPredicted RBP8.92□□□□□ -0.98
USP54-204ENST00000422491 OR2D3Q8NGH3 330 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 MGST2Q99735 147 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 GSX1Q9H4S2 264 aaPredicted RBP8.92□□□□□ -0.98
USP54-204ENST00000422491 SLC35D1Q9NTN3 355 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 MPC1Q9Y5U8 109 aa8.92□□□□□ -0.98
USP54-204ENST00000422491 CA2P00918 260 aa8.91□□□□□ -0.98
USP54-204ENST00000422491 CYC1P08574 325 aa8.91□□□□□ -0.98
USP54-204ENST00000422491 CATR1Q13166 79 aa8.91□□□□□ -0.98
USP54-204ENST00000422491 C9orf135Q5VTT2 229 aa8.91□□□□□ -0.98
USP54-204ENST00000422491 FAM53AQ6NSI3 398 aaPredicted RBP8.91□□□□□ -0.98
USP54-204ENST00000422491 GGTLC1Q9BX51 225 aa8.91□□□□□ -0.98
USP54-204ENST00000422491 BET1LQ9NYM9 111 aa8.91□□□□□ -0.98
USP54-204ENST00000422491 ANKRD30BLA7E2S9 258 aa8.91□□□□□ -0.98
USP54-204ENST00000422491 J3QT63 122 aa8.91□□□□□ -0.98
USP54-204ENST00000422491 BMPR1BO00238 502 aa8.91□□□□□ -0.98
USP54-204ENST00000422491 RBMXL2O75526 392 aaKnown RBP8.91□□□□□ -0.98
USP54-204ENST00000422491 OR10J4P0C629 311 aa8.91□□□□□ -0.98
USP54-204ENST00000422491 COX6A1P12074 109 aa8.91□□□□□ -0.98
USP54-204ENST00000422491 CA6P23280 308 aa8.91□□□□□ -0.98
USP54-204ENST00000422491 GCHFRP30047 84 aa8.91□□□□□ -0.98
USP54-204ENST00000422491 CLDN18P56856 261 aa8.91□□□□□ -0.98
USP54-204ENST00000422491 FBLN7Q53RD9 439 aa8.91□□□□□ -0.98
USP54-204ENST00000422491 MIC13Q5XKP0 118 aa8.91□□□□□ -0.98
USP54-204ENST00000422491 C19orf35Q6ZS72 473 aa8.91□□□□□ -0.98
USP54-204ENST00000422491 TSKUQ8WUA8 353 aa8.91□□□□□ -0.98
USP54-204ENST00000422491 TMEM45BQ96B21 275 aa8.91□□□□□ -0.98
USP54-204ENST00000422491 FREM1Q5H8C1 2179 aa8.91□□□□□ -0.98
USP54-204ENST00000422491 A0A1W2PN81 502 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms