RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 CLDN14O95500 239 aa13.94□□□□□ -0.18
PKP4-204ENST00000421462 CD1BP29016 333 aa13.94□□□□□ -0.18
PKP4-204ENST00000421462 B3GALT5-AS1P59052 145 aa13.94□□□□□ -0.18
PKP4-204ENST00000421462 RPL31P62899 125 aaKnown RBP13.94□□□□□ -0.18
PKP4-204ENST00000421462 GNG3P63215 75 aa13.94□□□□□ -0.18
PKP4-204ENST00000421462 UNQ5815/PRO19632Q6UWF5 114 aa13.94□□□□□ -0.18
PKP4-204ENST00000421462 VKORC1L1Q8N0U8 176 aa13.94□□□□□ -0.18
PKP4-204ENST00000421462 PMS2P5A8MQ11 134 aa13.94□□□□□ -0.18
PKP4-204ENST00000421462 ACTL6BO94805 426 aa13.94□□□□□ -0.18
PKP4-204ENST00000421462 OTX2P32243 289 aa13.94□□□□□ -0.18
PKP4-204ENST00000421462 ATP6V1FQ16864 119 aa13.94□□□□□ -0.18
PKP4-204ENST00000421462 RCHY1Q96PM5 261 aa13.94□□□□□ -0.18
PKP4-204ENST00000421462 PSG7Q13046 419 aa13.93□□□□□ -0.18
PKP4-204ENST00000421462 MRPL54Q6P161 138 aaKnown RBP13.93□□□□□ -0.18
PKP4-204ENST00000421462 STRADBQ9C0K7 418 aa13.93□□□□□ -0.18
PKP4-204ENST00000421462 PIGBOS1A0A0B4J2F0 54 aa13.93□□□□□ -0.18
PKP4-204ENST00000421462 K7EN84 100 aa13.93□□□□□ -0.18
PKP4-204ENST00000421462 CCL25O15444 150 aa13.93□□□□□ -0.18
PKP4-204ENST00000421462 COMPP49747 757 aaPredicted RBP13.93□□□□□ -0.18
PKP4-204ENST00000421462 LCN12Q6JVE5 192 aa13.93□□□□□ -0.18
PKP4-204ENST00000421462 ST6GALNAC3Q8NDV1 305 aa13.93□□□□□ -0.18
PKP4-204ENST00000421462 APH1AQ96BI3 265 aa13.93□□□□□ -0.18
PKP4-204ENST00000421462 NRN1Q9NPD7 142 aa13.93□□□□□ -0.18
PKP4-204ENST00000421462 KCNIP2Q9NS61 270 aa13.93□□□□□ -0.18
PKP4-204ENST00000421462 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.92□□□□□ -0.18
PKP4-204ENST00000421462 COX6A1P12074 109 aa13.92□□□□□ -0.18
PKP4-204ENST00000421462 AESQ08117 197 aa13.92□□□□□ -0.18
PKP4-204ENST00000421462 SPATA31B1PQ5VZV4 182 aa13.92□□□□□ -0.18
PKP4-204ENST00000421462 DOLPP1Q86YN1 238 aa13.92□□□□□ -0.18
PKP4-204ENST00000421462 SAXO1Q8IYX7 474 aa13.92□□□□□ -0.18
PKP4-204ENST00000421462 SERTAD4Q9NUC0 356 aa13.92□□□□□ -0.18
PKP4-204ENST00000421462 RNF24Q9Y225 148 aa13.92□□□□□ -0.18
PKP4-204ENST00000421462 YTHDF2Q9Y5A9 579 aaKnown RBP13.92□□□□□ -0.18
PKP4-204ENST00000421462 HCFC1P51610 2035 aa13.92□□□□□ -0.18
PKP4-204ENST00000421462 ZNF253O75346 499 aa13.92□□□□□ -0.18
PKP4-204ENST00000421462 CCL4P13236 92 aa13.92□□□□□ -0.18
PKP4-204ENST00000421462 C3AR1Q16581 482 aa13.92□□□□□ -0.18
PKP4-204ENST00000421462 MRPL14Q6P1L8 145 aaKnown RBP13.92□□□□□ -0.18
PKP4-204ENST00000421462 COLCA1Q6ZS62 124 aa13.92□□□□□ -0.18
PKP4-204ENST00000421462 MMD2Q8IY49 270 aa13.92□□□□□ -0.18
PKP4-204ENST00000421462 MRGPRDQ8TDS7 321 aa13.92□□□□□ -0.18
PKP4-204ENST00000421462 C5orf30Q96GV9 206 aa13.92□□□□□ -0.18
PKP4-204ENST00000421462 C12orf49Q9H741 205 aa13.92□□□□□ -0.18
PKP4-204ENST00000421462 HEYLQ9NQ87 328 aaPredicted RBP13.92□□□□□ -0.18
PKP4-204ENST00000421462 YPEL3P61236 119 aaPredicted RBP13.92□□□□□ -0.18
PKP4-204ENST00000421462 NINJ1Q92982 152 aa13.92□□□□□ -0.18
PKP4-204ENST00000421462 PARD6GQ9BYG4 376 aaPredicted RBP13.92□□□□□ -0.18
PKP4-204ENST00000421462 KMT2EQ8IZD2 1858 aa13.91□□□□□ -0.18
PKP4-204ENST00000421462 RNF212BA8MTL3 300 aa13.91□□□□□ -0.18
PKP4-204ENST00000421462 TMPRSS2O15393 492 aa13.91□□□□□ -0.18
PKP4-204ENST00000421462 FOXH1O75593 365 aa13.91□□□□□ -0.18
PKP4-204ENST00000421462 NDUFB8O95169 186 aa13.91□□□□□ -0.18
PKP4-204ENST00000421462 PLP2Q04941 152 aa13.91□□□□□ -0.18
PKP4-204ENST00000421462 RNASE7Q9H1E1 156 aaKnown RBP13.91□□□□□ -0.18
PKP4-204ENST00000421462 KCNIP1Q9NZI2 227 aa13.91□□□□□ -0.18
PKP4-204ENST00000421462 FAM90A26D6RGX4 464 aa13.91□□□□□ -0.18
PKP4-204ENST00000421462 CD99P14209 185 aa13.91□□□□□ -0.18
PKP4-204ENST00000421462 SRD5A2P31213 254 aa13.91□□□□□ -0.18
PKP4-204ENST00000421462 Q6P435 159 aa13.91□□□□□ -0.18
PKP4-204ENST00000421462 ABHD12Q8N2K0 398 aa13.91□□□□□ -0.18
PKP4-204ENST00000421462 LAMTOR2Q9Y2Q5 125 aa13.91□□□□□ -0.18
PKP4-204ENST00000421462 PINLYPA6NC86 204 aa13.9□□□□□ -0.18
PKP4-204ENST00000421462 GPX1P07203 203 aa13.9□□□□□ -0.18
PKP4-204ENST00000421462 GABRA2P47869 451 aa13.9□□□□□ -0.18
PKP4-204ENST00000421462 RIPPLY2Q5TAB7 128 aa13.9□□□□□ -0.18
PKP4-204ENST00000421462 IMMP1LQ96LU5 166 aa13.9□□□□□ -0.18
PKP4-204ENST00000421462 GCM1Q9NP62 436 aa13.9□□□□□ -0.18
PKP4-204ENST00000421462 IL36BQ9NZH7 164 aa13.9□□□□□ -0.18
PKP4-204ENST00000421462 CELA3AP09093 270 aa13.9□□□□□ -0.18
PKP4-204ENST00000421462 FBXO46Q6PJ61 603 aaPredicted RBP13.9□□□□□ -0.18
PKP4-204ENST00000421462 PSG11Q9UQ72 335 aa13.9□□□□□ -0.18
PKP4-204ENST00000421462 A8MXE2 369 aa13.89□□□□□ -0.19
PKP4-204ENST00000421462 HYPMO75409 117 aa13.89□□□□□ -0.19
PKP4-204ENST00000421462 NEURL1O76050 574 aa13.89□□□□□ -0.19
PKP4-204ENST00000421462 SRIP30626 198 aa13.89□□□□□ -0.19
PKP4-204ENST00000421462 CATR1Q13166 79 aa13.89□□□□□ -0.19
PKP4-204ENST00000421462 RPEL1Q2QD12 228 aa13.89□□□□□ -0.19
PKP4-204ENST00000421462 SPINK14Q6IE38 97 aa13.89□□□□□ -0.19
PKP4-204ENST00000421462 OR4B1Q8NGF8 309 aa13.89□□□□□ -0.19
PKP4-204ENST00000421462 GALMQ96C23 342 aa13.89□□□□□ -0.19
PKP4-204ENST00000421462 TP73-AS1Q9UF72 201 aa13.89□□□□□ -0.19
PKP4-204ENST00000421462 HEATR1Q9H583 2144 aaKnown RBP13.89□□□□□ -0.19
PKP4-204ENST00000421462 LINC00473A8K010 186 aa13.89□□□□□ -0.19
PKP4-204ENST00000421462 C15orf62A8K5M9 175 aa13.89□□□□□ -0.19
PKP4-204ENST00000421462 WNT9BO14905 357 aa13.89□□□□□ -0.19
PKP4-204ENST00000421462 CEACAM8P31997 349 aaPredicted RBP13.89□□□□□ -0.19
PKP4-204ENST00000421462 BRWD1-AS2P59051 145 aa13.89□□□□□ -0.19
PKP4-204ENST00000421462 ZNF497Q6ZNH5 498 aa13.89□□□□□ -0.19
PKP4-204ENST00000421462 ZNF826PQ6ZT77 177 aa13.89□□□□□ -0.19
PKP4-204ENST00000421462 HINT2Q9BX68 163 aa13.89□□□□□ -0.19
PKP4-204ENST00000421462 SEPSECSQ9HD40 501 aaKnown RBP13.89□□□□□ -0.19
PKP4-204ENST00000421462 TNCP24821 2201 aa13.89□□□□□ -0.19
PKP4-204ENST00000421462 ARFGEF3Q5TH69 2177 aa13.89□□□□□ -0.19
PKP4-204ENST00000421462 PSPNO60542 156 aa13.89□□□□□ -0.19
PKP4-204ENST00000421462 MT-CO3P00414 261 aa13.89□□□□□ -0.19
PKP4-204ENST00000421462 CA1P00915 261 aaPredicted RBP13.89□□□□□ -0.19
PKP4-204ENST00000421462 MGST1P10620 155 aaKnown RBP13.89□□□□□ -0.19
PKP4-204ENST00000421462 SELENOTP62341 195 aa13.89□□□□□ -0.19
PKP4-204ENST00000421462 ALKBH6Q3KRA9 238 aa13.89□□□□□ -0.19
PKP4-204ENST00000421462 FBXW9Q5XUX1 488 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms