RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 PSG5Q15238 335 aa13.95□□□□□ -0.18
LINC00271-201ENST00000421378 C5orf64Q2M2E5 130 aa13.95□□□□□ -0.18
LINC00271-201ENST00000421378 SP6Q3SY56 376 aa13.95□□□□□ -0.18
LINC00271-201ENST00000421378 VMA21Q3ZAQ7 101 aa13.95□□□□□ -0.18
LINC00271-201ENST00000421378 VKORC1L1Q8N0U8 176 aa13.95□□□□□ -0.18
LINC00271-201ENST00000421378 GALNT14Q96FL9 552 aa13.95□□□□□ -0.18
LINC00271-201ENST00000421378 RHOVQ96L33 236 aa13.95□□□□□ -0.18
LINC00271-201ENST00000421378 FBXL15Q9H469 300 aa13.95□□□□□ -0.18
LINC00271-201ENST00000421378 RANBP3Q9H6Z4 567 aaPredicted RBP13.95□□□□□ -0.18
LINC00271-201ENST00000421378 METTL1Q9UBP6 276 aaKnown RBP13.95□□□□□ -0.18
LINC00271-201ENST00000421378 KCNIP3Q9Y2W7 256 aa13.95□□□□□ -0.18
LINC00271-201ENST00000421378 TRAV6A0A075B6T7 132 aa13.94□□□□□ -0.18
LINC00271-201ENST00000421378 SAA1P0DJI8 122 aaPredicted RBP13.94□□□□□ -0.18
LINC00271-201ENST00000421378 RPA2P15927 270 aa13.94□□□□□ -0.18
LINC00271-201ENST00000421378 NQO2P16083 231 aa13.94□□□□□ -0.18
LINC00271-201ENST00000421378 UBE2KP61086 200 aa13.94□□□□□ -0.18
LINC00271-201ENST00000421378 BLCAPP62952 87 aa13.94□□□□□ -0.18
LINC00271-201ENST00000421378 SUPT4H1P63272 117 aaKnown RBP13.94□□□□□ -0.18
LINC00271-201ENST00000421378 TRIM16LQ309B1 348 aa13.94□□□□□ -0.18
LINC00271-201ENST00000421378 SLC25A42Q86VD7 318 aa13.94□□□□□ -0.18
LINC00271-201ENST00000421378 AIFM2Q9BRQ8 373 aa13.94□□□□□ -0.18
LINC00271-201ENST00000421378 TMEM222Q9H0R3 208 aa13.94□□□□□ -0.18
LINC00271-201ENST00000421378 NUBP2Q9Y5Y2 271 aa13.94□□□□□ -0.18
LINC00271-201ENST00000421378 MARCH11A6NNE9 402 aa13.93□□□□□ -0.18
LINC00271-201ENST00000421378 ANXA3P12429 323 aa13.93□□□□□ -0.18
LINC00271-201ENST00000421378 ANXA7P20073 488 aaKnown RBP13.93□□□□□ -0.18
LINC00271-201ENST00000421378 VAMP1P23763 118 aa13.93□□□□□ -0.18
LINC00271-201ENST00000421378 UCP1P25874 307 aa13.93□□□□□ -0.18
LINC00271-201ENST00000421378 UBE2MP61081 183 aaKnown RBP13.93□□□□□ -0.18
LINC00271-201ENST00000421378 ERVK-16P61578 105 aa13.93□□□□□ -0.18
LINC00271-201ENST00000421378 RELBQ01201 579 aa13.93□□□□□ -0.18
LINC00271-201ENST00000421378 SSX9Q7RTT3 188 aa13.93□□□□□ -0.18
LINC00271-201ENST00000421378 VSTM2AQ8TAG5 236 aa13.93□□□□□ -0.18
LINC00271-201ENST00000421378 GLYATL2Q8WU03 294 aa13.93□□□□□ -0.18
LINC00271-201ENST00000421378 TAF15Q92804 592 aaKnown RBP eCLIP13.93□□□□□ -0.18
LINC00271-201ENST00000421378 R3HDM4Q96D70 268 aa13.93□□□□□ -0.18
LINC00271-201ENST00000421378 SH2D7A6NKC9 451 aaPredicted RBP13.92□□□□□ -0.18
LINC00271-201ENST00000421378 DHODHQ02127 395 aa13.92□□□□□ -0.18
LINC00271-201ENST00000421378 PPP1R1AQ13522 171 aa13.92□□□□□ -0.18
LINC00271-201ENST00000421378 LIN54Q6MZP7 749 aa13.92□□□□□ -0.18
LINC00271-201ENST00000421378 DUSP18Q8NEJ0 188 aa13.92□□□□□ -0.18
LINC00271-201ENST00000421378 DMBX1Q8NFW5 382 aa13.92□□□□□ -0.18
LINC00271-201ENST00000421378 PRSS22Q9GZN4 317 aa13.92□□□□□ -0.18
LINC00271-201ENST00000421378 TPSG1Q9NRR2 321 aa13.92□□□□□ -0.18
LINC00271-201ENST00000421378 SIGLEC9Q9Y336 463 aa13.92□□□□□ -0.18
LINC00271-201ENST00000421378 PTTG1O95997 202 aa13.92□□□□□ -0.18
LINC00271-201ENST00000421378 KRASP01116 189 aa13.92□□□□□ -0.18
LINC00271-201ENST00000421378 HLA-AP01891 365 aaKnown RBP13.92□□□□□ -0.18
LINC00271-201ENST00000421378 HLA-DRB1P01911 266 aa13.92□□□□□ -0.18
LINC00271-201ENST00000421378 RIPPLY3P57055 190 aa13.92□□□□□ -0.18
LINC00271-201ENST00000421378 POU2AF1Q16633 256 aa13.92□□□□□ -0.18
LINC00271-201ENST00000421378 C4orf46Q504U0 113 aa13.92□□□□□ -0.18
LINC00271-201ENST00000421378 C9orf152Q5JTZ5 239 aa13.92□□□□□ -0.18
LINC00271-201ENST00000421378 PLET1Q6UQ28 207 aa13.92□□□□□ -0.18
LINC00271-201ENST00000421378 Q6ZSV7 163 aa13.92□□□□□ -0.18
LINC00271-201ENST00000421378 PPP1R27Q86WC6 154 aa13.92□□□□□ -0.18
LINC00271-201ENST00000421378 TEX45Q8NA69 505 aa13.92□□□□□ -0.18
LINC00271-201ENST00000421378 ZNF702PQ9H963 129 aa13.92□□□□□ -0.18
LINC00271-201ENST00000421378 TSPAN9O75954 239 aa13.91□□□□□ -0.18
LINC00271-201ENST00000421378 OR2A4O95047 310 aa13.91□□□□□ -0.18
LINC00271-201ENST00000421378 CDS2O95674 445 aa13.91□□□□□ -0.18
LINC00271-201ENST00000421378 IGKV1-39P01597 117 aa13.91□□□□□ -0.18
LINC00271-201ENST00000421378 IGKV1D-39P04432 117 aa13.91□□□□□ -0.18
LINC00271-201ENST00000421378 CRYGBP07316 175 aa13.91□□□□□ -0.18
LINC00271-201ENST00000421378 H2AFB2P0C5Z0 115 aa13.91□□□□□ -0.18
LINC00271-201ENST00000421378 OR4E1P0C645 316 aa13.91□□□□□ -0.18
LINC00271-201ENST00000421378 G6PCP35575 357 aa13.91□□□□□ -0.18
LINC00271-201ENST00000421378 RAG2P55895 527 aa13.91□□□□□ -0.18
LINC00271-201ENST00000421378 TMEM187Q14656 261 aa13.91□□□□□ -0.18
LINC00271-201ENST00000421378 OR4A47Q6IF82 309 aa13.91□□□□□ -0.18
LINC00271-201ENST00000421378 Q6ZS46 218 aa13.91□□□□□ -0.18
LINC00271-201ENST00000421378 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.91□□□□□ -0.18
LINC00271-201ENST00000421378 OR2A7Q96R45 310 aa13.91□□□□□ -0.18
LINC00271-201ENST00000421378 ALX4Q9H161 411 aaPredicted RBP13.91□□□□□ -0.18
LINC00271-201ENST00000421378 BEX1Q9HBH7 125 aa13.91□□□□□ -0.18
LINC00271-201ENST00000421378 ATRQ13535 2644 aa13.9□□□□□ -0.18
LINC00271-201ENST00000421378 CREBL2O60519 120 aaPredicted RBP13.9□□□□□ -0.18
LINC00271-201ENST00000421378 KBTBD11O94819 623 aa13.9□□□□□ -0.18
LINC00271-201ENST00000421378 NDUFA7O95182 113 aa13.9□□□□□ -0.18
LINC00271-201ENST00000421378 AKR1C2P52895 323 aa13.9□□□□□ -0.18
LINC00271-201ENST00000421378 RAB25P57735 213 aa13.9□□□□□ -0.18
LINC00271-201ENST00000421378 SRPXP78539 464 aa13.9□□□□□ -0.18
LINC00271-201ENST00000421378 DHRS2Q13268 280 aa13.9□□□□□ -0.18
LINC00271-201ENST00000421378 KRTAP24-1Q3LI83 254 aa13.9□□□□□ -0.18
LINC00271-201ENST00000421378 ARSJQ5FYB0 599 aaPredicted RBP13.9□□□□□ -0.18
LINC00271-201ENST00000421378 PUSL1Q8N0Z8 303 aaKnown RBP13.9□□□□□ -0.18
LINC00271-201ENST00000421378 Q8N2B8 174 aa13.9□□□□□ -0.18
LINC00271-201ENST00000421378 OR2T6Q8NHC8 308 aa13.9□□□□□ -0.18
LINC00271-201ENST00000421378 RBPMSQ93062 196 aaKnown RBP13.9□□□□□ -0.18
LINC00271-201ENST00000421378 SEC22AQ96IW7 307 aa13.9□□□□□ -0.18
LINC00271-201ENST00000421378 CLCC1Q96S66 551 aa13.9□□□□□ -0.18
LINC00271-201ENST00000421378 HSPB9Q9BQS6 159 aa13.9□□□□□ -0.18
LINC00271-201ENST00000421378 TMEM140Q9NV12 185 aa13.9□□□□□ -0.18
LINC00271-201ENST00000421378 BET1LQ9NYM9 111 aa13.9□□□□□ -0.18
LINC00271-201ENST00000421378 PRR13Q9NZ81 148 aa13.9□□□□□ -0.18
LINC00271-201ENST00000421378 ATG12O94817 140 aa13.89□□□□□ -0.19
LINC00271-201ENST00000421378 SFT2D2O95562 160 aa13.89□□□□□ -0.19
LINC00271-201ENST00000421378 CA2P00918 260 aa13.89□□□□□ -0.19
LINC00271-201ENST00000421378 HKR1P10072 659 aa13.89□□□□□ -0.19
LINC00271-201ENST00000421378 MECP2P51608 486 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms