RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 MMP23AO75900 390 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 FABP1P07148 127 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 TAGLN2P37802 199 aaKnown RBP9.07□□□□□ -0.96
DDX56-203ENST00000421223 EIF2S3LQ2VIR3 472 aaKnown RBP9.07□□□□□ -0.96
DDX56-203ENST00000421223 SLC16A13Q7RTY0 426 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 ZNF709Q8N972 641 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 WDR61Q9GZS3 305 aaKnown RBP9.07□□□□□ -0.96
DDX56-203ENST00000421223 OR6C3Q9NZP0 311 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 KIAA1456Q9P272 454 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 HSPB7Q9UBY9 170 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 A0A1B0GW64 132 aa9.06□□□□□ -0.96
DDX56-203ENST00000421223 SCAF4O95104 1147 aaKnown RBP9.06□□□□□ -0.96
DDX56-203ENST00000421223 MYOD1P15172 320 aa9.06□□□□□ -0.96
DDX56-203ENST00000421223 TBR1Q16650 682 aa9.06□□□□□ -0.96
DDX56-203ENST00000421223 LRRC75BQ2VPJ9 315 aa9.06□□□□□ -0.96
DDX56-203ENST00000421223 ZNF66Q6ZN08 573 aa9.06□□□□□ -0.96
DDX56-203ENST00000421223 C1orf229Q6ZS94 237 aaPredicted RBP9.06□□□□□ -0.96
DDX56-203ENST00000421223 ZNF429Q86V71 674 aa9.06□□□□□ -0.96
DDX56-203ENST00000421223 DMRTC2Q8IXT2 367 aaPredicted RBP9.06□□□□□ -0.96
DDX56-203ENST00000421223 C1orf174Q8IYL3 243 aa9.06□□□□□ -0.96
DDX56-203ENST00000421223 ABHD12Q8N2K0 398 aa9.06□□□□□ -0.96
DDX56-203ENST00000421223 NANPQ8TBE9 248 aa9.06□□□□□ -0.96
DDX56-203ENST00000421223 RCC1LQ96I51 464 aaKnown RBP9.06□□□□□ -0.96
DDX56-203ENST00000421223 MAP1LC3B2A6NCE7 125 aa9.06□□□□□ -0.96
DDX56-203ENST00000421223 IFNA4P05014 189 aa9.06□□□□□ -0.96
DDX56-203ENST00000421223 HTD2P86397 168 aa9.06□□□□□ -0.96
DDX56-203ENST00000421223 PRB3Q04118 309 aaPredicted RBP9.06□□□□□ -0.96
DDX56-203ENST00000421223 ICAM4Q14773 271 aa9.06□□□□□ -0.96
DDX56-203ENST00000421223 FAM169BQ8N8A8 192 aa9.06□□□□□ -0.96
DDX56-203ENST00000421223 MAP1LC3BQ9GZQ8 125 aa9.06□□□□□ -0.96
DDX56-203ENST00000421223 TUBA4BQ9H853 241 aa9.06□□□□□ -0.96
DDX56-203ENST00000421223 GFOD1Q9NXC2 390 aa9.06□□□□□ -0.96
DDX56-203ENST00000421223 HCFC1P51610 2035 aa9.06□□□□□ -0.96
DDX56-203ENST00000421223 LRBAP50851 2863 aa9.06□□□□□ -0.96
DDX56-203ENST00000421223 TACC2O95359 2948 aa9.06□□□□□ -0.96
DDX56-203ENST00000421223 ABCA1O95477 2261 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 IGLV3-9A0A075B6K5 115 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 HBE1P02100 147 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 S100A9P06702 114 aaKnown RBP9.05□□□□□ -0.96
DDX56-203ENST00000421223 REG1BP48304 166 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 ZNF726P1Q15940 193 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 RNF212Q495C1 297 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 CT45A1Q5HYN5 189 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 CT45A3Q8NHU0 189 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 JPT1Q9UK76 154 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 DYSFO75923 2080 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 RAB29O14966 203 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 SRP19P09132 144 aaKnown RBP9.05□□□□□ -0.96
DDX56-203ENST00000421223 LOXL3P58215 753 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 MRPS11P82912 194 aaKnown RBP9.05□□□□□ -0.96
DDX56-203ENST00000421223 FFAR4Q5NUL3 377 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 OR5T1Q8NG75 326 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 CLDND2Q8NHS1 167 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 RAB39BQ96DA2 213 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 DYNLRB1Q9NP97 96 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 IL19Q9UHD0 177 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 RALYQ9UKM9 306 aaKnown RBP9.05□□□□□ -0.96
DDX56-203ENST00000421223 ANKHD1Q8IWZ3 2542 aaKnown RBP9.05□□□□□ -0.96
DDX56-203ENST00000421223 OR2C1O95371 312 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 IGKV1D-33P01593 117 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 IGKV1-33P01594 117 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 CCL3L1P16619 93 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 ADIPOQQ15848 244 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 C17orf58Q2M2W7 97 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 SP5Q6BEB4 398 aaPredicted RBP9.05□□□□□ -0.96
DDX56-203ENST00000421223 TRAT1Q6PIZ9 186 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 TMEM14EPQ6UXP3 125 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 C1orf122Q6ZSJ8 110 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 RPP25LQ8N5L8 163 aaKnown RBP9.05□□□□□ -0.96
DDX56-203ENST00000421223 RHOVQ96L33 236 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 WFIKKN1Q96NZ8 548 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 NIPSNAP3BQ9BS92 247 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 IFI27L2Q9H2X8 130 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 SAP30LQ9HAJ7 183 aa9.05□□□□□ -0.96
DDX56-203ENST00000421223 SAA2-SAA4A0A096LPE2 208 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 A0A1B0GV90 55 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 FAM90A27PA6NNH2 459 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 LHBP01229 141 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 MT-ND4LP03901 98 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 SAA2P0DJI9 122 aaPredicted RBP9.04□□□□□ -0.96
DDX56-203ENST00000421223 GCSAMLQ5JQS6 135 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 ZNF343Q6P1L6 599 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 ACSM6Q6P461 480 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 RBMS3Q6XE24 437 aaKnown RBP9.04□□□□□ -0.96
DDX56-203ENST00000421223 TMEM140Q9NV12 185 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 BSNQ9UPA5 3926 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 KBTBD11-OT1A0A1B0GTJ5 212 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 BTBD17A6NE02 478 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 FAM90A26D6RGX4 464 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 YPEL1O60688 119 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 HPRT1P00492 218 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 RAB5BP61020 215 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 DLK1P80370 383 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 EIF4EBP1Q13541 118 aaPredicted RBP9.04□□□□□ -0.96
DDX56-203ENST00000421223 MRGPRGQ86SM5 289 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 OR10G4Q8NGN3 311 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 OR10G9Q8NGN4 311 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 OR10G7Q8NGN6 311 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 Q8TCH9 128 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 GATAD1Q8WUU5 269 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms