RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 ABHD12Q8N2K0 398 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 FAM222BQ8WU58 562 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 EDARADDQ8WWZ3 215 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 SDSLQ96GA7 329 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 HSD17B10Q99714 261 aaKnown RBP7.24□□□□□ -1.25
SNCA-206ENST00000420646 ZNF665Q9H7R5 613 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 JPT1Q9UK76 154 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 TET2Q6N021 2002 aaPredicted RBP7.24□□□□□ -1.25
SNCA-206ENST00000420646 F2RL2O00254 374 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 YPEL1O60688 119 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 SLC38A11Q08AI6 406 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 ZNF726P1Q15940 193 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 C10orf91Q5T1B1 145 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 ZNF600Q6ZNG1 722 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 ZBTB34Q8NCN2 500 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 RNASE6Q93091 150 aaKnown RBP7.24□□□□□ -1.25
SNCA-206ENST00000420646 ISOC2Q96AB3 205 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 YPEL2Q96QA6 119 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 TOLLIPQ9H0E2 274 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 OR6C3Q9NZP0 311 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 SLC25A10Q9UBX3 287 aaPredicted RBP7.24□□□□□ -1.25
SNCA-206ENST00000420646 CARHSP1Q9Y2V2 147 aaKnown RBP7.24□□□□□ -1.25
SNCA-206ENST00000420646 SPG11Q96JI7 2443 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 IGKV1D-33P01593 117 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 IGKV1-33P01594 117 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 SNRNP70P08621 437 aaKnown RBP7.23□□□□□ -1.25
SNCA-206ENST00000420646 MMP9P14780 707 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 TFF3Q07654 80 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 C3orf36Q3SXR2 165 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 FAM209BQ5JX69 171 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 SCGB1C1Q8TD33 95 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 RXFP4Q8TDU9 374 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 C12orf57Q99622 126 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 ZNF251Q9BRH9 671 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 HINT2Q9BX68 163 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 DYNLRB1Q9NP97 96 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 GFOD1Q9NXC2 390 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 PRELID3BQ9Y3B1 194 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 TEP1Q99973 2627 aaKnown RBP7.23□□□□□ -1.25
SNCA-206ENST00000420646 TENM4Q6N022 2769 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 WNT2P09544 360 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 RPL31P62899 125 aaKnown RBP7.23□□□□□ -1.25
SNCA-206ENST00000420646 MSMO1Q15800 293 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 ZNF66Q6ZN08 573 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 ZNF383Q8NA42 475 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 KDF1Q8NAX2 398 aaPredicted RBP7.23□□□□□ -1.25
SNCA-206ENST00000420646 S1PR3Q99500 378 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 PUS1Q9Y606 427 aaKnown RBP eCLIP7.23□□□□□ -1.25
SNCA-206ENST00000420646 ZFP92A6NM28 416 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 M0R036 132 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 RRHO14718 337 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 MRPS11P82912 194 aaKnown RBP7.23□□□□□ -1.25
SNCA-206ENST00000420646 RBPJQ06330 500 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 CR1LQ2VPA4 569 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 CLRN3Q8NCR9 226 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 VKORC1Q9BQB6 163 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 TMPRSS5Q9H3S3 457 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 GNG13Q9P2W3 67 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 CTSZQ9UBR2 303 aa7.23□□□□□ -1.25
SNCA-206ENST00000420646 TANC2Q9HCD6 1990 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 UMAD1C9J7I0 102 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 TMEM178BH3BS89 294 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 FOSL1P15407 271 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 TNFRSF1AP19438 455 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 RAB2AP61019 212 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 PAX5Q02548 391 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 GCSAMLQ5JQS6 135 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 TMEM200BQ69YZ2 307 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 TMEM14EPQ6UXP3 125 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 GNPNAT1Q96EK6 184 aaPredicted RBP7.22□□□□□ -1.25
SNCA-206ENST00000420646 RHOVQ96L33 236 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 WDR61Q9GZS3 305 aaKnown RBP7.22□□□□□ -1.25
SNCA-206ENST00000420646 RPS10P5Q9NQ39 176 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 TMEM106BQ9NUM4 274 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 TMEM140Q9NV12 185 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 CISD1Q9NZ45 108 aaKnown RBP7.22□□□□□ -1.25
SNCA-206ENST00000420646 STRAPQ9Y3F4 350 aaKnown RBP7.22□□□□□ -1.25
SNCA-206ENST00000420646 KLF2Q9Y5W3 355 aaPredicted RBP7.22□□□□□ -1.25
SNCA-206ENST00000420646 WNK2Q9Y3S1 2297 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 UNC79Q9P2D8 2635 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 PPIAL4EA0A075B759 164 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 RBFOX3A6NFN3 312 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 SRRM4A7MD48 611 aaKnown RBP7.22□□□□□ -1.25
SNCA-206ENST00000420646 PMS2P5A8MQ11 134 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 NUDT19A8MXV4 375 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 PPIAL4DF5H284 164 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 DFFBO76075 338 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 ARG1P05089 322 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 PPIAL4FP0DN26 164 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 RAB5CP51148 216 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 HBG1P69891 147 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 HBG2P69892 147 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 FLI1Q01543 452 aaPredicted RBP7.22□□□□□ -1.25
SNCA-206ENST00000420646 LRRC75BQ2VPJ9 315 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 IGFBPL1Q8WX77 278 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 CLCC1Q96S66 551 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 COA4Q9NYJ1 87 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 PPIAL4AQ9Y536 164 aa7.22□□□□□ -1.25
SNCA-206ENST00000420646 TRAV20A0A0B4J274 112 aa7.21□□□□□ -1.25
SNCA-206ENST00000420646 LINC00587B1AMM8 73 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms