RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, human

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BDNF-208	ENST00000418212	MRPL54	Q6P161	138 aa	Known RBP	11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	OR2T10	Q8NGZ9	312 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	DMRTA2	Q96SC8	542 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	NPVF	Q9HCQ7	196 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	PARP11	Q9NR21	331 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	CDH23	Q9H251	3354 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	TMSB15B	A0A087X1C1	80 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	ZNF385C	Q66K41	422 aa	Predicted RBP	11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	C1orf174	Q8IYL3	243 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	OR10G8	Q8NGN5	311 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	WBP1	Q96G27	269 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	SH3BGRL3	Q9H299	93 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	ZDHHC8	Q9ULC8	765 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	ARL2-SNX15	V9GYD0	113 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	TECTA	O75443	2155 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	HKR1	P10072	659 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	PTGDS	P41222	190 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	MIC13	Q5XKP0	118 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	TMEM45B	Q96B21	275 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	TMEM140	Q9NV12	185 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	FREM1	Q5H8C1	2179 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	REG1A	P05451	166 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	SPCS3	P61009	180 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	RPL39P5	Q59GN2	51 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	SELENOH	Q8IZQ5	122 aa	Known RBP	11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	ZIC4	Q8N9L1	334 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	ZNF596	Q8TC21	504 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	RBKS	Q9H477	322 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	CHODL	Q9H9P2	273 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	TMEM167B	Q9NRX6	74 aa		11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	KLF2	Q9Y5W3	355 aa	Predicted RBP	11.24	□□□□□ -0.61
BDNF-208	ENST00000418212	DUXB	A0A1W2PPF3	345 aa		11.23	□□□□□ -0.61
BDNF-208	ENST00000418212	C5orf52	A6NGY3	159 aa		11.23	□□□□□ -0.61
BDNF-208	ENST00000418212	SULT1A2	P50226	295 aa		11.23	□□□□□ -0.61
BDNF-208	ENST00000418212	RPL8	P62917	257 aa	Known RBP	11.23	□□□□□ -0.61
BDNF-208	ENST00000418212	ZNF645	Q8N7E2	425 aa		11.23	□□□□□ -0.61
BDNF-208	ENST00000418212	PXMP4	Q9Y6I8	212 aa		11.23	□□□□□ -0.61
BDNF-208	ENST00000418212	REL	Q04864	619 aa	Predicted RBP	11.23	□□□□□ -0.61
BDNF-208	ENST00000418212	DNAH14	Q0VDD8	3507 aa		11.23	□□□□□ -0.61
BDNF-208	ENST00000418212	SI	P14410	1827 aa		11.23	□□□□□ -0.61
BDNF-208	ENST00000418212	C5orf63	A6NC05	138 aa		11.23	□□□□□ -0.61
BDNF-208	ENST00000418212	PRSS47	A8MTI9	375 aa		11.23	□□□□□ -0.61
BDNF-208	ENST00000418212	KCNMB1	Q16558	191 aa		11.23	□□□□□ -0.61
BDNF-208	ENST00000418212	DPF1	Q92782	380 aa		11.23	□□□□□ -0.61
BDNF-208	ENST00000418212	PACRG	Q96M98	296 aa	Predicted RBP	11.23	□□□□□ -0.61
BDNF-208	ENST00000418212	C1QTNF5	Q9BXJ0	243 aa		11.23	□□□□□ -0.61
BDNF-208	ENST00000418212	NAT8	Q9UHE5	227 aa		11.23	□□□□□ -0.61
BDNF-208	ENST00000418212	CARHSP1	Q9Y2V2	147 aa	Known RBP	11.23	□□□□□ -0.61
BDNF-208	ENST00000418212		J3QRE1	110 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	UBE2C	O00762	179 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	HSPB1	P04792	205 aa	Known RBP	11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	CD40	P25942	277 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	RNASEK	Q6P5S7	137 aa	Known RBP	11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	IGHV3OR16-10	A0A075B7F0	116 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	IGHV2OR16-5	A0A0B4J2B6	119 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	GAPDH	P04406	335 aa	Known RBP	11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	IGFBP3	P17936	291 aa	Predicted RBP	11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	COL8A1	P27658	744 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	FOXF2	Q12947	444 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	TMEM187	Q14656	261 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	C10orf113	Q5VZT2	155 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	DHRS11	Q6UWP2	260 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	ZNF788	Q6ZQV5	615 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	SAXO1	Q8IYX7	474 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212		Q8WTZ3	238 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	TAF15	Q92804	592 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	LYZL4	Q96KX0	146 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	SLC2A8	Q9NY64	477 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	TUBD1	Q9UJT1	453 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	TNC	P24821	2201 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	PPIAL4C	A0A0B4J2A2	164 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	HELT	A6NFD8	242 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	LINC00869	P0C866	280 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	PPIAL4G	P0DN37	164 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	RND2	P52198	227 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	TNFRSF9	Q07011	255 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	TOMM20L	Q6UXN7	152 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	IL22RA2	Q969J5	263 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	SGK494	Q96LW2	274 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212	GFI1	Q99684	422 aa		11.22	□□□□□ -0.61
BDNF-208	ENST00000418212		A1L4Q6	167 aa		11.21	□□□□□ -0.61
BDNF-208	ENST00000418212	CEACAM18	A8MTB9	384 aa		11.21	□□□□□ -0.61
BDNF-208	ENST00000418212		H3BTX0	84 aa		11.21	□□□□□ -0.61
BDNF-208	ENST00000418212	PITX3	O75364	302 aa		11.21	□□□□□ -0.61
BDNF-208	ENST00000418212	MELTF	P08582	738 aa		11.21	□□□□□ -0.61
BDNF-208	ENST00000418212	PNRC1	Q12796	327 aa	Predicted RBP	11.21	□□□□□ -0.61
BDNF-208	ENST00000418212	PMS2P11	Q13670	270 aa		11.21	□□□□□ -0.61
BDNF-208	ENST00000418212	DOLPP1	Q86YN1	238 aa		11.21	□□□□□ -0.61
BDNF-208	ENST00000418212	WFDC3	Q8IUB2	231 aa		11.21	□□□□□ -0.61
BDNF-208	ENST00000418212	PAQR4	Q8N4S7	273 aa	Predicted RBP	11.21	□□□□□ -0.61
BDNF-208	ENST00000418212	OR13A1	Q8NGR1	328 aa		11.21	□□□□□ -0.61
BDNF-208	ENST00000418212	NOL4L	Q96MY1	436 aa	Predicted RBP	11.21	□□□□□ -0.61
BDNF-208	ENST00000418212	RSPO3	Q9BXY4	272 aa	Predicted RBP	11.21	□□□□□ -0.61
BDNF-208	ENST00000418212	IGHV1-69-2	A0A0G2JMI3	117 aa		11.21	□□□□□ -0.61
BDNF-208	ENST00000418212	NDUFB4	O95168	129 aa		11.21	□□□□□ -0.61
BDNF-208	ENST00000418212	HTR1D	P28221	377 aa		11.21	□□□□□ -0.61
BDNF-208	ENST00000418212	AMT	P48728	403 aa		11.21	□□□□□ -0.61
BDNF-208	ENST00000418212	ERVFRD-1	P60508	538 aa		11.21	□□□□□ -0.61
BDNF-208	ENST00000418212	SERF2	P84101	59 aa		11.21	□□□□□ -0.61
BDNF-208	ENST00000418212	LRP11	Q86VZ4	500 aa		11.21	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms