RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 LRRC30A6NM36 301 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 LINC01565O15544 149 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 P0C879 139 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 PATE4P0C8F1 98 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 STAG3L2P0CL84 134 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 STAG3L3P0CL85 134 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 ZNF439Q8NDP4 499 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 ZNF596Q8TC21 504 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 EAF1Q96JC9 268 aaPredicted RBP6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 FGF23Q9GZV9 251 aaPredicted RBP6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 ZG16O60844 167 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 CXorf1O96002 111 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 NTF3P20783 257 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 CLDN18P56856 261 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 RPS16P62249 146 aaKnown RBP6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 CCL7P80098 99 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 ZNF718Q3SXZ3 478 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 FAM58AQ8N1B3 248 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 FADS6Q8N9I5 356 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 C11orf52Q96A22 123 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 KCNS2Q9ULS6 477 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 KMT2EQ8IZD2 1858 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 HLA-DQA1P01909 254 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 OR10J4P0C629 311 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 NBEAP1P0C6P0 100 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 SELENOVP59797 346 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 TBR1Q16650 682 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 MPV17L2Q567V2 206 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 FAM69BQ5VUD6 431 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 TMEM38BQ9NVV0 291 aa6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 YTHDF2Q9Y5A9 579 aaKnown RBP6.72□□□□□ -1.33
HMGXB4-202ENST00000418170 TRGV10A0A0A0MS01 117 aa6.71□□□□□ -1.33
HMGXB4-202ENST00000418170 ODAMA1E959 279 aa6.71□□□□□ -1.33
HMGXB4-202ENST00000418170 OR2T8A6NH00 312 aa6.71□□□□□ -1.33
HMGXB4-202ENST00000418170 TRAPPC2LH3BP13 241 aa6.71□□□□□ -1.33
HMGXB4-202ENST00000418170 CD1BP29016 333 aa6.71□□□□□ -1.33
HMGXB4-202ENST00000418170 EDDM3BP56851 147 aa6.71□□□□□ -1.33
HMGXB4-202ENST00000418170 TMEM92Q6UXU6 159 aa6.71□□□□□ -1.33
HMGXB4-202ENST00000418170 ANKRD37Q7Z713 158 aa6.71□□□□□ -1.33
HMGXB4-202ENST00000418170 LINC00596Q86U02 117 aa6.71□□□□□ -1.33
HMGXB4-202ENST00000418170 C7orf61Q8IZ16 206 aa6.71□□□□□ -1.33
HMGXB4-202ENST00000418170 DRAM1Q8N682 238 aa6.71□□□□□ -1.33
HMGXB4-202ENST00000418170 DEFB125Q8N687 156 aa6.71□□□□□ -1.33
HMGXB4-202ENST00000418170 SCCPDHQ8NBX0 429 aa6.71□□□□□ -1.33
HMGXB4-202ENST00000418170 PRO3102Q9H379 93 aa6.71□□□□□ -1.33
HMGXB4-202ENST00000418170 GAGE12BA1L429 117 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 RRHO14718 337 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 GPM6AP51674 278 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 RELBQ01201 579 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 MKXQ8IYA7 352 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 NEUROG1Q92886 237 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 ZDHHC16Q969W1 377 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 OR2D2Q9H210 308 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 GON4LQ3T8J9 2241 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 UNC13CQ8NB66 2214 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 TRAV24A0A0B4J272 114 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 J3QR06 171 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 SPINK4O60575 86 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 AMY1AP04745 511 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 B4GALT1P15291 398 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 ARL4DP49703 201 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 AMMECR1LQ6DCA0 310 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 ABCA7Q8IZY2 2146 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 OR8B3Q8NGG8 313 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 OR8B2Q96RD0 313 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 OR2H1Q9GZK4 316 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 FAM181BA6NEQ2 426 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 RAMP3O60896 148 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 LINC00869P0C866 280 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 G6PCP35575 357 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 Q56UQ5 140 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 FAM71F2Q6NXP2 309 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 EBLN2Q6P2I7 272 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 PARM1Q6UWI2 310 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 C18orf32Q8TCD1 76 aa6.71□□□□□ -1.34
HMGXB4-202ENST00000418170 LOC400499M0QZD8 3231 aa6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 TNRC6AQ8NDV7 1962 aaKnown RBP6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 OPRK1P41145 380 aa6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 IGFBP7Q16270 282 aa6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 BVES-AS1Q5T3Y7 98 aa6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 LHFPL4Q7Z7J7 247 aa6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 C1QTNF5Q9BXJ0 243 aa6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 C19orf25Q9UFG5 118 aaPredicted RBP6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 IL19Q9UHD0 177 aa6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 CORTO00230 105 aa6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 MPDU1O75352 247 aa6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 LTBRP36941 435 aa6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 UBE2G1P62253 170 aa6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 ARF6P62330 175 aa6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 HLA-BQ31612 363 aa6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 CEACAM21Q3KPI0 293 aa6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 CPT1CQ8TCG5 803 aa6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 MEGF9Q9H1U4 602 aa6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 WASHC3Q9Y3C0 194 aa6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 FRYQ5TBA9 3013 aa6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 BRWD1Q9NSI6 2320 aa6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 USF3Q68DE3 2245 aa6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 ASCC3Q8N3C0 2202 aaKnown RBP6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 RAC2P15153 192 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms