RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 A8MWP6 167 aa11.5□□□□□ -0.57
DDX56-202ENST00000415758 OR2J3O76001 311 aa11.5□□□□□ -0.57
DDX56-202ENST00000415758 ACTL6BO94805 426 aa11.5□□□□□ -0.57
DDX56-202ENST00000415758 HLA-AP01891 365 aaKnown RBP11.5□□□□□ -0.57
DDX56-202ENST00000415758 FCGR3AP08637 254 aa11.5□□□□□ -0.57
DDX56-202ENST00000415758 GNAO1P09471 354 aa11.5□□□□□ -0.57
DDX56-202ENST00000415758 SAA1P0DJI8 122 aaPredicted RBP11.5□□□□□ -0.57
DDX56-202ENST00000415758 ATF4P18848 351 aaPredicted RBP11.5□□□□□ -0.57
DDX56-202ENST00000415758 SPHARQ15513 63 aa11.5□□□□□ -0.57
DDX56-202ENST00000415758 KLK9Q2XQG4 91 aa11.5□□□□□ -0.57
DDX56-202ENST00000415758 ANKRD55Q3KP44 614 aa11.5□□□□□ -0.57
DDX56-202ENST00000415758 ZNF57Q68EA5 555 aaPredicted RBP11.5□□□□□ -0.57
DDX56-202ENST00000415758 CEMP1Q6PRD7 247 aaPredicted RBP11.5□□□□□ -0.57
DDX56-202ENST00000415758 C8orf59Q8N0T1 100 aaPredicted RBP11.5□□□□□ -0.57
DDX56-202ENST00000415758 BPIFB6Q8NFQ5 453 aa11.5□□□□□ -0.57
DDX56-202ENST00000415758 KLK9Q9UKQ9 250 aa11.5□□□□□ -0.57
DDX56-202ENST00000415758 TP53TG1Q9Y2A0 90 aa11.5□□□□□ -0.57
DDX56-202ENST00000415758 ZNF257Q9Y2Q1 563 aa11.5□□□□□ -0.57
DDX56-202ENST00000415758 LSM2Q9Y333 95 aaKnown RBP11.5□□□□□ -0.57
DDX56-202ENST00000415758 TMEM213A2RRL7 107 aa11.49□□□□□ -0.57
DDX56-202ENST00000415758 NDUFB8O95169 186 aa11.49□□□□□ -0.57
DDX56-202ENST00000415758 RANBP1P43487 201 aa11.49□□□□□ -0.57
DDX56-202ENST00000415758 MAP2K4P45985 399 aa11.49□□□□□ -0.57
DDX56-202ENST00000415758 EWSR1Q01844 656 aaKnown RBP eCLIP11.49□□□□□ -0.57
DDX56-202ENST00000415758 RAB11BQ15907 218 aa11.49□□□□□ -0.57
DDX56-202ENST00000415758 C2orf76Q3KRA6 126 aa11.49□□□□□ -0.57
DDX56-202ENST00000415758 TMEM91Q6ZNR0 172 aa11.49□□□□□ -0.57
DDX56-202ENST00000415758 OR52B4Q8NGK2 314 aa11.49□□□□□ -0.57
DDX56-202ENST00000415758 FAM3DQ96BQ1 224 aa11.49□□□□□ -0.57
DDX56-202ENST00000415758 CENPOQ9BU64 300 aa11.49□□□□□ -0.57
DDX56-202ENST00000415758 MLXQ9UH92 298 aa11.49□□□□□ -0.57
DDX56-202ENST00000415758 AK6Q9Y3D8 172 aaKnown RBP11.49□□□□□ -0.57
DDX56-202ENST00000415758 RBM7Q9Y580 266 aaKnown RBP11.49□□□□□ -0.57
DDX56-202ENST00000415758 A0A0J9YWU9 116 aa11.48□□□□□ -0.57
DDX56-202ENST00000415758 NPIPB5A8MRT5 1133 aa11.48□□□□□ -0.57
DDX56-202ENST00000415758 TEX22C9J3V5 150 aa11.48□□□□□ -0.57
DDX56-202ENST00000415758 DENRO43583 198 aaKnown RBP11.48□□□□□ -0.57
DDX56-202ENST00000415758 MRPS15P82914 257 aaKnown RBP11.48□□□□□ -0.57
DDX56-202ENST00000415758 PMS2P11Q13670 270 aa11.48□□□□□ -0.57
DDX56-202ENST00000415758 FAM106AQ4KMX7 169 aa11.48□□□□□ -0.57
DDX56-202ENST00000415758 C10orf55Q5SWW7 151 aa11.48□□□□□ -0.57
DDX56-202ENST00000415758 Q6ZS49 121 aa11.48□□□□□ -0.57
DDX56-202ENST00000415758 Q6ZWC4 215 aa11.48□□□□□ -0.57
DDX56-202ENST00000415758 H1FOOQ8IZA3 346 aaPredicted RBP11.48□□□□□ -0.57
DDX56-202ENST00000415758 UXS1Q8NBZ7 420 aa11.48□□□□□ -0.57
DDX56-202ENST00000415758 CACNG8Q8WXS5 425 aa11.48□□□□□ -0.57
DDX56-202ENST00000415758 RAB3CQ96E17 227 aa11.48□□□□□ -0.57
DDX56-202ENST00000415758 CCDC140Q96MF4 163 aa11.48□□□□□ -0.57
DDX56-202ENST00000415758 FANCD2OSQ96PS1 177 aa11.48□□□□□ -0.57
DDX56-202ENST00000415758 FBXL7Q9UJT9 491 aa11.48□□□□□ -0.57
DDX56-202ENST00000415758 TRAV25A0A0B4J276 109 aa11.47□□□□□ -0.57
DDX56-202ENST00000415758 ERICH4A6NGS2 130 aa11.47□□□□□ -0.57
DDX56-202ENST00000415758 CRYGCP07315 174 aa11.47□□□□□ -0.57
DDX56-202ENST00000415758 BMI1P35226 326 aa11.47□□□□□ -0.57
DDX56-202ENST00000415758 ARL3P36405 182 aa11.47□□□□□ -0.57
DDX56-202ENST00000415758 CLDN12P56749 244 aa11.47□□□□□ -0.57
DDX56-202ENST00000415758 OR4A47Q6IF82 309 aa11.47□□□□□ -0.57
DDX56-202ENST00000415758 LYG2Q86SG7 212 aa11.47□□□□□ -0.57
DDX56-202ENST00000415758 GINS4Q9BRT9 223 aa11.47□□□□□ -0.57
DDX56-202ENST00000415758 OR51E2Q9H255 320 aa11.47□□□□□ -0.57
DDX56-202ENST00000415758 SLC2A9Q9NRM0 540 aa11.47□□□□□ -0.57
DDX56-202ENST00000415758 RAB22AQ9UL26 194 aa11.47□□□□□ -0.57
DDX56-202ENST00000415758 KLK5Q9Y337 293 aaPredicted RBP11.47□□□□□ -0.57
DDX56-202ENST00000415758 HMX3A6NHT5 357 aa11.46□□□□□ -0.57
DDX56-202ENST00000415758 E7EUB6 86 aa11.46□□□□□ -0.57
DDX56-202ENST00000415758 ARL6IP5O75915 188 aa11.46□□□□□ -0.57
DDX56-202ENST00000415758 IL6RP08887 468 aaPredicted RBP11.46□□□□□ -0.57
DDX56-202ENST00000415758 C8orf88P0DMB2 117 aa11.46□□□□□ -0.57
DDX56-202ENST00000415758 TM4SF20Q53R12 229 aa11.46□□□□□ -0.57
DDX56-202ENST00000415758 LIPKQ5VXJ0 399 aa11.46□□□□□ -0.57
DDX56-202ENST00000415758 CLEC19AQ6UXS0 136 aa11.46□□□□□ -0.57
DDX56-202ENST00000415758 RPP25LQ8N5L8 163 aaKnown RBP11.46□□□□□ -0.57
DDX56-202ENST00000415758 TMEM203Q969S6 136 aa11.46□□□□□ -0.57
DDX56-202ENST00000415758 TMEM272A0A1B0GTI8 110 aa11.45□□□□□ -0.58
DDX56-202ENST00000415758 ZNF320A2RRD8 509 aa11.45□□□□□ -0.58
DDX56-202ENST00000415758 MFNGO00587 321 aa11.45□□□□□ -0.58
DDX56-202ENST00000415758 UBE2CO00762 179 aa11.45□□□□□ -0.58
DDX56-202ENST00000415758 SPRY2O43597 315 aa11.45□□□□□ -0.58
DDX56-202ENST00000415758 FCGR3BO75015 233 aa11.45□□□□□ -0.58
DDX56-202ENST00000415758 SCAF4O95104 1147 aaKnown RBP11.45□□□□□ -0.58
DDX56-202ENST00000415758 ZNF735P0CB33 412 aa11.45□□□□□ -0.58
DDX56-202ENST00000415758 PSMD7P51665 324 aa11.45□□□□□ -0.58
DDX56-202ENST00000415758 PLA2G7Q13093 441 aa11.45□□□□□ -0.58
DDX56-202ENST00000415758 MED22Q15528 200 aa11.45□□□□□ -0.58
DDX56-202ENST00000415758 TRAM1Q15629 374 aa11.45□□□□□ -0.58
DDX56-202ENST00000415758 SSX1Q16384 188 aa11.45□□□□□ -0.58
DDX56-202ENST00000415758 ZNF645Q8N7E2 425 aa11.45□□□□□ -0.58
DDX56-202ENST00000415758 OR10R2Q8NGX6 335 aa11.45□□□□□ -0.58
DDX56-202ENST00000415758 TMEM167AQ8TBQ9 72 aa11.45□□□□□ -0.58
DDX56-202ENST00000415758 MAFIPQ8WZ33 124 aa11.45□□□□□ -0.58
DDX56-202ENST00000415758 UFD1Q92890 307 aa11.45□□□□□ -0.58
DDX56-202ENST00000415758 MARC2Q969Z3 335 aa11.45□□□□□ -0.58
DDX56-202ENST00000415758 FYTTD1Q96QD9 318 aaKnown RBP11.45□□□□□ -0.58
DDX56-202ENST00000415758 DCUN1D5Q9BTE7 237 aa11.45□□□□□ -0.58
DDX56-202ENST00000415758 PRELID3BQ9Y3B1 194 aa11.45□□□□□ -0.58
DDX56-202ENST00000415758 SELENOKQ9Y6D0 94 aa11.45□□□□□ -0.58
DDX56-202ENST00000415758 V9GY05 133 aa11.45□□□□□ -0.58
DDX56-202ENST00000415758 A0A1B0GW64 132 aa11.44□□□□□ -0.58
DDX56-202ENST00000415758 RAB27BO00194 218 aa11.44□□□□□ -0.58
DDX56-202ENST00000415758 KBTBD11O94819 623 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms