RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 C11orf94C9JXX5 98 aa8.16□□□□□ -1.1
CD44-206ENST00000415148 C1QTNF9P0C862 333 aa8.16□□□□□ -1.1
CD44-206ENST00000415148 IL3RAP26951 378 aa8.16□□□□□ -1.1
CD44-206ENST00000415148 CD1BP29016 333 aa8.16□□□□□ -1.1
CD44-206ENST00000415148 UBE2G2P60604 165 aa8.16□□□□□ -1.1
CD44-206ENST00000415148 FOXL1Q12952 345 aa8.16□□□□□ -1.1
CD44-206ENST00000415148 TDRG1Q3Y452 100 aa8.16□□□□□ -1.1
CD44-206ENST00000415148 PDLIM3Q53GG5 364 aaPredicted RBP8.16□□□□□ -1.1
CD44-206ENST00000415148 FAM78BQ5VT40 261 aa8.16□□□□□ -1.1
CD44-206ENST00000415148 MRPL41Q8IXM3 137 aaKnown RBP8.16□□□□□ -1.1
CD44-206ENST00000415148 Q8N7P7 452 aa8.16□□□□□ -1.1
CD44-206ENST00000415148 OR52E5Q8NH55 327 aa8.16□□□□□ -1.1
CD44-206ENST00000415148 TMEM18Q96B42 140 aa8.16□□□□□ -1.1
CD44-206ENST00000415148 TMEM204Q9BSN7 226 aa8.16□□□□□ -1.1
CD44-206ENST00000415148 A0A1W2PNU3 283 aaPredicted RBP8.15□□□□□ -1.1
CD44-206ENST00000415148 MARCH11A6NNE9 402 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 C15orf62A8K5M9 175 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 SPINT2O43291 252 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 RBMXL2O75526 392 aaKnown RBP8.15□□□□□ -1.1
CD44-206ENST00000415148 HPRT1P00492 218 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 KITLGP21583 273 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 GCH1P30793 250 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 GABRA2P47869 451 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 ATP5G3P48201 142 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 TMPRSS3P57727 454 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 RPL15P61313 204 aaKnown RBP8.15□□□□□ -1.1
CD44-206ENST00000415148 Q6ZT83 130 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 C1orf174Q8IYL3 243 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 TMEM178AQ8NBL3 297 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 MRGPRDQ8TDS7 321 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 A0A1W2PPV4 95 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 LINC00473A8K010 186 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 FRMD6-AS1P0C7T7 363 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 HNF1AP20823 631 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 MPV17P39210 176 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 OPRK1P41145 380 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 GNB1P62873 340 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 MZT1Q08AG7 82 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 SMIM21Q3B7S5 101 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 BTNL3Q6UXE8 466 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 WDR82Q6UXN9 313 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 LINC01551Q86U37 167 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 GBGT1Q8N5D6 347 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 BEND2Q8NDZ0 799 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 R3HDM4Q96D70 268 aa8.15□□□□□ -1.1
CD44-206ENST00000415148 TRAV38-1A0A0B4J264 116 aa8.14□□□□□ -1.11
CD44-206ENST00000415148 A0A1B0GWJ7 208 aa8.14□□□□□ -1.11
CD44-206ENST00000415148 A6NNC1 897 aa8.14□□□□□ -1.11
CD44-206ENST00000415148 C15orf65H3BRN8 121 aa8.14□□□□□ -1.11
CD44-206ENST00000415148 WNT9BO14905 357 aa8.14□□□□□ -1.11
CD44-206ENST00000415148 RBFOX2O43251 390 aaKnown RBP eCLIP8.14□□□□□ -1.11
CD44-206ENST00000415148 IGKV3-15P01624 115 aa8.14□□□□□ -1.11
CD44-206ENST00000415148 CR1LQ2VPA4 569 aa8.14□□□□□ -1.11
CD44-206ENST00000415148 FAM214BQ7L5A3 538 aa8.14□□□□□ -1.11
CD44-206ENST00000415148 C1orf162Q8NEQ5 155 aaPredicted RBP8.14□□□□□ -1.11
CD44-206ENST00000415148 CLCF1Q9UBD9 225 aa8.14□□□□□ -1.11
CD44-206ENST00000415148 AHCTF1Q8WYP5 2266 aa8.14□□□□□ -1.11
CD44-206ENST00000415148 GRIFINA4D1Z8 144 aa8.14□□□□□ -1.11
CD44-206ENST00000415148 SCGB1D1O95968 90 aa8.14□□□□□ -1.11
CD44-206ENST00000415148 DUTP33316 252 aaKnown RBP8.14□□□□□ -1.11
CD44-206ENST00000415148 CNN1P51911 297 aaKnown RBP8.14□□□□□ -1.11
CD44-206ENST00000415148 SOX8P57073 446 aa8.14□□□□□ -1.11
CD44-206ENST00000415148 FOXF2Q12947 444 aa8.14□□□□□ -1.11
CD44-206ENST00000415148 Q6ZR03 302 aa8.14□□□□□ -1.11
CD44-206ENST00000415148 ZNF826PQ6ZT77 177 aa8.14□□□□□ -1.11
CD44-206ENST00000415148 TMEM144Q7Z5S9 345 aa8.14□□□□□ -1.11
CD44-206ENST00000415148 QTRT1Q9BXR0 403 aaKnown RBP8.14□□□□□ -1.11
CD44-206ENST00000415148 TP53TG3Q9ULZ0 132 aa8.14□□□□□ -1.11
CD44-206ENST00000415148 SMG1Q96Q15 3661 aaKnown RBP8.14□□□□□ -1.11
CD44-206ENST00000415148 TRBV20OR9-2A0A075B6H5 130 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 LYZL6O75951 148 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 LINC00310P59036 64 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 GUSBP1Q15486 140 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 RNFT1Q5M7Z0 435 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 OR13A1Q8NGR1 328 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 IL17BQ9UHF5 180 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 JPT1Q9UK76 154 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 PSG11Q9UQ72 335 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 TET2Q6N021 2002 aaPredicted RBP8.13□□□□□ -1.11
CD44-206ENST00000415148 MED13Q9UHV7 2174 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 A0A0U1RQK1 487 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 ZNF320A2RRD8 509 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 F2Z2F3 143 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 YPEL1O60688 119 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 NDUFB4O95168 129 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 CXorf1O96002 111 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 OR9G9P0C7N8 305 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 STAG3L2P0CL84 134 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 STAG3L3P0CL85 134 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 BTF3P20290 206 aaKnown RBP8.13□□□□□ -1.11
CD44-206ENST00000415148 CD82P27701 267 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 KIR2DS2P43631 304 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 GPR12P47775 334 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 RAB4BP61018 213 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 ZNF718Q3SXZ3 478 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 MBNL2Q5VZF2 373 aaKnown RBP8.13□□□□□ -1.11
CD44-206ENST00000415148 CST9LP1Q5W188 147 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 FAM90A1Q86YD7 464 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 OR4A16Q8NH70 328 aa8.13□□□□□ -1.11
CD44-206ENST00000415148 YPEL2Q96QA6 119 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms