RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 A0A0B4J2A0 478 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 LOC100130705A0A1B0GUX0 176 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 TGOLN2O43493 480 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 MMP23AO75900 390 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 KCNK2O95069 426 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 IFNA16P05015 189 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 LIMS3P0CW19 117 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 LIMS4P0CW20 117 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 CD36P16671 472 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 RPL5P46777 297 aaKnown RBP1.87□□□□□ -2.11
MCF2-204ENST00000414978 P2RX1P51575 399 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 TCL1AP56279 114 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 RAP1AP62834 184 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 ARG2P78540 354 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 LOXL1Q08397 574 aaPredicted RBP1.87□□□□□ -2.11
MCF2-204ENST00000414978 TWIST1Q15672 202 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 C1orf158Q8N1D5 194 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 COX18Q8N8Q8 333 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 KNL1Q8NG31 2342 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 OR10G2Q8NGC3 310 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 OR6Q1Q8NGQ2 317 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 OR2G3Q8NGZ4 309 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 OR2V2Q96R30 315 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 TIMM17AQ99595 171 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 TMEM243Q9BU79 118 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 BCL2L10Q9HD36 194 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 PRTFDC1Q9NRG1 225 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 XCL2Q9UBD3 114 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 SHPKQ9UHJ6 478 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 OPN4Q9UHM6 478 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 A0A087WXM4 84 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 TGIF2-C20orf24A0A0A6YYL0 155 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 IGHV7-81A0A0B4J1V7 117 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 TRAV8-4A0A0B4J246 113 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 A6NDN8 102 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 CCDC160A6NGH7 325 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 METTL15A6NJ78 407 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 EPM2AB3EWF7 344 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 MAGEB4O15481 346 aaPredicted RBP1.87□□□□□ -2.11
MCF2-204ENST00000414978 CA11O75493 328 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 HAND1O96004 215 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 P01737 135 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 CDK1P06493 297 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 F2RP25116 425 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 TALDO1P37837 337 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 DAPP51397 102 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 ESRRGP62508 458 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 RSPO1Q2MKA7 263 aaPredicted RBP1.87□□□□□ -2.11
MCF2-204ENST00000414978 TRMT12Q53H54 448 aaKnown RBP1.87□□□□□ -2.11
MCF2-204ENST00000414978 GDPD3Q7L5L3 318 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 HMGN2P46Q86SG4 172 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 LFNGQ8NES3 379 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 OR51S1Q8NGJ8 323 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 OR1J4Q8NGS1 313 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 OR6K3Q8NGY3 331 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 OR51Q1Q8NH59 317 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 ZNF675Q8TD23 568 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 DOK4Q8TEW6 326 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 TMEM234Q8WY98 164 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 ANKRD9Q96BM1 317 aaPredicted RBP1.87□□□□□ -2.11
MCF2-204ENST00000414978 DOK1Q99704 481 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 CDCA4Q9BXL8 241 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 YTHDF1Q9BYJ9 559 aaKnown RBP1.87□□□□□ -2.11
MCF2-204ENST00000414978 SLC25A31Q9H0C2 315 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 DSN1Q9H410 356 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 RYR3Q15413 4870 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 NINQ8N4C6 2090 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 A0A1B0GXF2 115 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 EFCAB9A8MZ26 197 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 F5H768 121 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 J3QT63 122 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 M0R1X1 148 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 FAAHO00519 579 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 CNIH1O95406 144 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 CRYGDP07320 174 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 CST2P09228 141 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 IFI6P09912 130 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 MYL9P24844 172 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 ELK4P28324 431 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 GABRA3P34903 492 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 TAS2R41P59536 307 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 SPCS3P61009 180 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 ZNF45Q02386 682 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 FUT5Q11128 374 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 PPP1R1AQ13522 171 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 ARHGAP11BQ3KRB8 267 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 LIN52Q52LA3 116 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 ACP7Q6ZNF0 438 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 OLIG3Q7RTU3 272 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 OR52R1Q8NGF1 315 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 BLNKQ8WV28 456 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 METTL26Q96S19 204 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 STACQ99469 402 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 CHST5Q9GZS9 411 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 NMNAT1Q9HAN9 279 aaPredicted RBP1.86□□□□□ -2.11
MCF2-204ENST00000414978 ACER3Q9NUN7 267 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 CSAG2Q9Y5P2 127 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 ALG5Q9Y673 324 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 KCNE3Q9Y6H6 103 aa1.86□□□□□ -2.11
MCF2-204ENST00000414978 HSPE1-MOB4S4R3N1 261 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms