RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 ZNF816Q0VGE8 651 aaPredicted RBP3.86□□□□□ -1.79
VPS41-205ENST00000414632 HERPUD1Q15011 391 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 CDNFQ49AH0 187 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 RPL39P5Q59GN2 51 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 GPR107Q5VW38 600 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 C10orf99Q6UWK7 81 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 MOB1BQ7L9L4 216 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 TPRA1Q86W33 373 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 TGIF2LXQ8IUE1 241 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 ODF3L1Q8IXM7 274 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 LINC00311Q8N616 119 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 OR13F1Q8NGS4 319 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 RTN4IP1Q8WWV3 396 aaPredicted RBP3.86□□□□□ -1.79
VPS41-205ENST00000414632 ST6GALNAC6Q969X2 333 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 SLC25A38Q96DW6 304 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 URB1-AS1Q96HZ7 61 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 RBM14Q96PK6 669 aaKnown RBP3.86□□□□□ -1.79
VPS41-205ENST00000414632 MRPL20Q9BYC9 149 aaKnown RBP3.86□□□□□ -1.79
VPS41-205ENST00000414632 IFI27L2Q9H2X8 130 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 C16orf95Q9H693 158 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 Q9N2K0 584 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 RAB18Q9NP72 206 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 RAB9BQ9NP90 201 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 C12orf4Q9NQ89 552 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 RHBDL2Q9NX52 303 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 LINC00527Q9UJ94 153 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 JPT1Q9UK76 154 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 PITPNC1Q9UKF7 332 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 MMP24Q9Y5R2 645 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 TRAV18A0A075B6X5 111 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 TRBV6-6A0A0A6YYG2 114 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 A0A1B0GUS0 222 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 NCBP2LA6PVI3 153 aaKnown RBP3.85□□□□□ -1.79
VPS41-205ENST00000414632 OOSP1A8MZH6 123 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 TRDCB7Z8K6 153 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 FABP7O15540 132 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 SSX5O60225 188 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 YPEL1O60688 119 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 OR2F2O95006 317 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 FAM106CPP0CH98 169 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 CD28P10747 220 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 ZBTB25P24278 435 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 KIR2DS4P43632 304 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 SEC61BP60468 96 aaKnown RBP3.85□□□□□ -1.79
VPS41-205ENST00000414632 HTD2P86397 168 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 NSUN5P1Q3KNT7 163 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 TIMM50Q3ZCQ8 353 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 PAPPA-AS1Q5QFB9 102 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 WDR73Q6P4I2 378 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 SAMD12Q8N8I0 201 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 DRAXINQ8NBI3 349 aaPredicted RBP3.85□□□□□ -1.79
VPS41-205ENST00000414632 NOL4LQ96MY1 436 aaPredicted RBP3.85□□□□□ -1.79
VPS41-205ENST00000414632 YPEL2Q96QA6 119 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 CITED1Q99966 193 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 ST6GALNAC5Q9BVH7 336 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 MRPS26Q9BYN8 205 aaKnown RBP3.85□□□□□ -1.79
VPS41-205ENST00000414632 RIMS4Q9H426 269 aaPredicted RBP3.85□□□□□ -1.79
VPS41-205ENST00000414632 RANBP3Q9H6Z4 567 aaPredicted RBP3.85□□□□□ -1.79
VPS41-205ENST00000414632 RDH8Q9NYR8 311 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 COMMD3Q9UBI1 195 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 MOB4Q9Y3A3 225 aa3.85□□□□□ -1.79
VPS41-205ENST00000414632 IGHV4-28A0A0C4DH34 117 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 IGLV5-39A0A0G2JS06 123 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 SERPINE3A8MV23 424 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 H7C2Y5 167 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 PLXNB1O43157 2135 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 RBMXL2O75526 392 aaKnown RBP3.84□□□□□ -1.79
VPS41-205ENST00000414632 MOSP00540 346 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 EIF4EP06730 217 aaKnown RBP3.84□□□□□ -1.79
VPS41-205ENST00000414632 FGF2P09038 288 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 OR8U9P0C7N5 309 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 NFYAP23511 347 aaPredicted RBP3.84□□□□□ -1.79
VPS41-205ENST00000414632 RANBP1P43487 201 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 ZNF137PP52743 207 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 GNG2P59768 71 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 GAGE2BQ13066 116 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 RBMS2Q15434 407 aaKnown RBP3.84□□□□□ -1.79
VPS41-205ENST00000414632 TMEM30BQ3MIR4 351 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 ODF3L2Q3SX64 289 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 ZNF260Q3ZCT1 412 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 Q3ZCU0 254 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 GAGE2EQ4V326 116 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 UBE2NLQ5JXB2 153 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 HACD4Q5VWC8 232 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 GAGE2AQ6NT46 116 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 FAM131AQ6UXB0 335 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 ZNF833PQ6ZTB9 187 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 GPR141Q7Z602 305 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 ZNF554Q86TJ5 538 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 ZNF329Q86UD4 541 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 CLVS1Q8IUQ0 354 aaPredicted RBP3.84□□□□□ -1.79
VPS41-205ENST00000414632 FAM219AQ8IW50 185 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 Q8N6K4 173 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 GVQW1Q8N7I0 195 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 C5orf56Q8N8D9 126 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 C8orf31Q8N9H6 132 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 NHLRC2Q8NBF2 726 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 NEXN-AS1Q8NBZ9 246 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 OR5AU1Q8NGC0 362 aa3.84□□□□□ -1.79
VPS41-205ENST00000414632 OR4A4PQ8NGN8 299 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms