RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 K7EP34 96 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 SULT2B1O00204 365 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 FCN1O00602 326 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 TNFSF12O43508 249 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 NUDT14O95848 222 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 CA2P00918 260 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 IGHG1P01857 330 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 HLA-DQB1P01920 261 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 ATP1B1P05026 303 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 HOXB7P09629 217 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 SEC11BP0C7V7 166 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 OPRK1P41145 380 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 ATP5G3P48201 142 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 GABARAPL2P60520 117 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 ZNF85Q03923 595 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 C1DQ13901 141 aaKnown RBP2.9□□□□□ -1.95
SF3B1-203ENST00000414174 GSG1Q2KHT4 349 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 PIK3CD-AS1Q5SR53 167 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 TRNP1Q6NT89 227 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 LCN15Q6UWW0 184 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 DGAT2L6Q6ZPD8 337 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 Q6ZUT4 128 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 PTAR1Q7Z6K3 402 aaPredicted RBP2.9□□□□□ -1.95
SF3B1-203ENST00000414174 TMEM179BQ7Z7N9 219 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 ZDHHC22Q8N966 263 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 OR1L3Q8NH93 324 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 SLC25A40Q8TBP6 338 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 POP5Q969H6 163 aaKnown RBP2.9□□□□□ -1.95
SF3B1-203ENST00000414174 ELSPBP1Q96BH3 223 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 C4orf45Q96LM5 186 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 AP1S3Q96PC3 154 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 PEBP4Q96S96 227 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 RTL8AQ9BWD3 113 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 TSSK6Q9BXA6 273 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 Q9HAA7 133 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 GNB4Q9HAV0 340 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 ZNF331Q9NQX6 463 aaPredicted RBP2.9□□□□□ -1.95
SF3B1-203ENST00000414174 TVP23BQ9NYZ1 205 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 NUDT4Q9NZJ9 180 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 FUT9Q9Y231 359 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 WASHC3Q9Y3C0 194 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 ZNF106Q9H2Y7 1883 aaKnown RBP2.9□□□□□ -1.95
SF3B1-203ENST00000414174 LAMC1P11047 1609 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 MTCL1Q9Y4B5 1905 aaKnown RBP2.89□□□□□ -1.95
SF3B1-203ENST00000414174 PLIN4Q96Q06 1357 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 CUX1P39880 1505 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 hCG_1818297A0A087WSY0 165 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 SAA2-SAA4A0A096LPE2 208 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 TRGV10A0A0A0MS01 117 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 TRAV8-2A0A0B4J237 113 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 LOC101059948A0A1B0GTJ6 334 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 TEX48A0A1B0GUV7 120 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 KNCNA6PVL3 124 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 C15orf62A8K5M9 175 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 A8MT66 165 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 VWC2LB2RUY7 222 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 C8orf87E5RJ46 101 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 TMEM262E9PQX1 116 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 J3QT63 122 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 SLC17A2O00624 439 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 KLF7O75840 302 aaPredicted RBP2.89□□□□□ -1.95
SF3B1-203ENST00000414174 GPANK1O95872 356 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 HLA-DRB1P01911 266 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 EIF4EP06730 217 aaKnown RBP2.89□□□□□ -1.95
SF3B1-203ENST00000414174 MMP7P09237 267 aaPredicted RBP2.89□□□□□ -1.95
SF3B1-203ENST00000414174 GLI3P10071 1580 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 COL11A2P13942 1736 aaPredicted RBP2.89□□□□□ -1.95
SF3B1-203ENST00000414174 CTLA4P16410 223 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 CCL1P22362 96 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 CRYGSP22914 178 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 FKBP2P26885 142 aaKnown RBP2.89□□□□□ -1.95
SF3B1-203ENST00000414174 PRSS3P35030 304 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 DRD3P35462 400 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 ATP4BP51164 291 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 FOXA3P55318 350 aaPredicted RBP2.89□□□□□ -1.95
SF3B1-203ENST00000414174 HLA-DRB3P79483 266 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 PLGLB1Q02325 96 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 Q0VG73 95 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 EIF3IQ13347 325 aaKnown RBP2.89□□□□□ -1.95
SF3B1-203ENST00000414174 TTC32Q5I0X7 151 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 KLF17Q5JT82 389 aaPredicted RBP2.89□□□□□ -1.95
SF3B1-203ENST00000414174 FKBP1CQ5VVH2 108 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 ZNF324BQ6AW86 544 aaPredicted RBP2.89□□□□□ -1.95
SF3B1-203ENST00000414174 XAF1Q6GPH4 301 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 OR2T2Q6IF00 324 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 LCN12Q6JVE5 192 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 MORN3Q6PF18 240 aaPredicted RBP2.89□□□□□ -1.95
SF3B1-203ENST00000414174 SPATA31D1Q6ZQQ2 1576 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 Q6ZS92 163 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 CEACAM19Q7Z692 300 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 ATOH7Q8N100 152 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 ANKRD29Q8N6D5 301 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 Q8N9P0 234 aaPredicted RBP2.89□□□□□ -1.95
SF3B1-203ENST00000414174 ZFP62Q8NB50 900 aaPredicted RBP2.89□□□□□ -1.95
SF3B1-203ENST00000414174 OR2T33Q8NG76 320 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 OR1J1Q8NGS3 322 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 OR52N5Q8NH56 324 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 PHLDA1Q8WV24 401 aaPredicted RBP2.89□□□□□ -1.95
SF3B1-203ENST00000414174 TWIST2Q8WVJ9 160 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 NEUROG1Q92886 237 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms