RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 SFRP2Q96HF1 295 aa12.16□□□□□ -0.46
SEMA3F-202ENST00000413852 HSPB9Q9BQS6 159 aa12.16□□□□□ -0.46
SEMA3F-202ENST00000413852 PARD6AQ9NPB6 346 aa12.16□□□□□ -0.46
SEMA3F-202ENST00000413852 SIT1Q9Y3P8 196 aa12.16□□□□□ -0.46
SEMA3F-202ENST00000413852 MPC1Q9Y5U8 109 aa12.16□□□□□ -0.46
SEMA3F-202ENST00000413852 DMXL1Q9Y485 3027 aa12.16□□□□□ -0.46
SEMA3F-202ENST00000413852 CADP27708 2225 aa12.15□□□□□ -0.46
SEMA3F-202ENST00000413852 OR5B21A6NL26 309 aa12.15□□□□□ -0.46
SEMA3F-202ENST00000413852 F6UZH7 168 aa12.15□□□□□ -0.46
SEMA3F-202ENST00000413852 M0R143 59 aa12.15□□□□□ -0.46
SEMA3F-202ENST00000413852 SLC25A40Q8TBP6 338 aa12.15□□□□□ -0.46
SEMA3F-202ENST00000413852 COQ2Q96H96 371 aa12.15□□□□□ -0.46
SEMA3F-202ENST00000413852 OBP2BQ9NPH6 170 aa12.15□□□□□ -0.46
SEMA3F-202ENST00000413852 IGKV3D-15A0A087WSY6 115 aa12.15□□□□□ -0.46
SEMA3F-202ENST00000413852 K7EN84 100 aa12.15□□□□□ -0.46
SEMA3F-202ENST00000413852 SH2D1BO14796 132 aa12.15□□□□□ -0.46
SEMA3F-202ENST00000413852 FCGR3BO75015 233 aa12.15□□□□□ -0.46
SEMA3F-202ENST00000413852 CMTM2Q8TAZ6 248 aa12.15□□□□□ -0.46
SEMA3F-202ENST00000413852 DIRC2Q96SL1 478 aa12.15□□□□□ -0.46
SEMA3F-202ENST00000413852 ACTL6BO94805 426 aa12.15□□□□□ -0.47
SEMA3F-202ENST00000413852 IGHEP01854 428 aa12.15□□□□□ -0.47
SEMA3F-202ENST00000413852 P0C879 139 aa12.15□□□□□ -0.47
SEMA3F-202ENST00000413852 SRP14P37108 136 aaKnown RBP12.15□□□□□ -0.47
SEMA3F-202ENST00000413852 TCL1AP56279 114 aa12.15□□□□□ -0.47
SEMA3F-202ENST00000413852 C1orf194Q5T5A4 169 aa12.15□□□□□ -0.47
SEMA3F-202ENST00000413852 TIMM9Q9Y5J7 89 aa12.15□□□□□ -0.47
SEMA3F-202ENST00000413852 MARCH11A6NNE9 402 aa12.14□□□□□ -0.47
SEMA3F-202ENST00000413852 CD1BP29016 333 aa12.14□□□□□ -0.47
SEMA3F-202ENST00000413852 ARR3P36575 388 aa12.14□□□□□ -0.47
SEMA3F-202ENST00000413852 IER3P46695 156 aa12.14□□□□□ -0.47
SEMA3F-202ENST00000413852 OR1C1Q15619 314 aa12.14□□□□□ -0.47
SEMA3F-202ENST00000413852 KRTCAP3Q53RY4 240 aa12.14□□□□□ -0.47
SEMA3F-202ENST00000413852 ATP1A1-AS1Q5TC04 95 aa12.14□□□□□ -0.47
SEMA3F-202ENST00000413852 TMEM144Q7Z5S9 345 aa12.14□□□□□ -0.47
SEMA3F-202ENST00000413852 RTL8AQ9BWD3 113 aa12.14□□□□□ -0.47
SEMA3F-202ENST00000413852 MS4A5Q9H3V2 200 aa12.14□□□□□ -0.47
SEMA3F-202ENST00000413852 MBNL3Q9NUK0 354 aaKnown RBP12.14□□□□□ -0.47
SEMA3F-202ENST00000413852 BOKQ9UMX3 212 aaPredicted RBP12.14□□□□□ -0.47
SEMA3F-202ENST00000413852 HCFC1P51610 2035 aa12.14□□□□□ -0.47
SEMA3F-202ENST00000413852 NTN3O00634 580 aaPredicted RBP12.14□□□□□ -0.47
SEMA3F-202ENST00000413852 PROP1O75360 226 aa12.14□□□□□ -0.47
SEMA3F-202ENST00000413852 KITLGP21583 273 aa12.14□□□□□ -0.47
SEMA3F-202ENST00000413852 TIMP3P35625 211 aa12.14□□□□□ -0.47
SEMA3F-202ENST00000413852 ERVK11-1P61568 191 aa12.14□□□□□ -0.47
SEMA3F-202ENST00000413852 MSMO1Q15800 293 aa12.14□□□□□ -0.47
SEMA3F-202ENST00000413852 RPL39P5Q59GN2 51 aa12.14□□□□□ -0.47
SEMA3F-202ENST00000413852 Q8TCH9 128 aa12.14□□□□□ -0.47
SEMA3F-202ENST00000413852 SEPSECSQ9HD40 501 aaKnown RBP12.14□□□□□ -0.47
SEMA3F-202ENST00000413852 KCNIP1Q9NZI2 227 aa12.14□□□□□ -0.47
SEMA3F-202ENST00000413852 AHRRA9YTQ3 701 aa12.13□□□□□ -0.47
SEMA3F-202ENST00000413852 SOX8P57073 446 aa12.13□□□□□ -0.47
SEMA3F-202ENST00000413852 ZNF90Q03938 601 aa12.13□□□□□ -0.47
SEMA3F-202ENST00000413852 TMEM68Q96MH6 324 aa12.13□□□□□ -0.47
SEMA3F-202ENST00000413852 LINC00470Q9BZP3 86 aa12.13□□□□□ -0.47
SEMA3F-202ENST00000413852 RP1L1Q8IWN7 2480 aaPredicted RBP12.13□□□□□ -0.47
SEMA3F-202ENST00000413852 MDFIC2A0A1B0GVS7 189 aa12.13□□□□□ -0.47
SEMA3F-202ENST00000413852 NPIPB11E5RHQ5 1161 aa12.13□□□□□ -0.47
SEMA3F-202ENST00000413852 TYMSP04818 313 aa12.13□□□□□ -0.47
SEMA3F-202ENST00000413852 FXYD3Q14802 87 aa12.13□□□□□ -0.47
SEMA3F-202ENST00000413852 Q6ZVH6 145 aa12.13□□□□□ -0.47
SEMA3F-202ENST00000413852 TMEM208Q9BTX3 173 aa12.13□□□□□ -0.47
SEMA3F-202ENST00000413852 PKIBQ9C010 78 aa12.13□□□□□ -0.47
SEMA3F-202ENST00000413852 TET2Q6N021 2002 aaPredicted RBP12.13□□□□□ -0.47
SEMA3F-202ENST00000413852 KALRNO60229 2985 aa12.13□□□□□ -0.47
SEMA3F-202ENST00000413852 RAB4AP20338 218 aa12.13□□□□□ -0.47
SEMA3F-202ENST00000413852 CCKARP32238 428 aa12.13□□□□□ -0.47
SEMA3F-202ENST00000413852 MOB3BQ86TA1 216 aa12.13□□□□□ -0.47
SEMA3F-202ENST00000413852 ZCCHC14Q8WYQ9 949 aaKnown RBP12.13□□□□□ -0.47
SEMA3F-202ENST00000413852 NINJ1Q92982 152 aa12.13□□□□□ -0.47
SEMA3F-202ENST00000413852 MGST2Q99735 147 aa12.13□□□□□ -0.47
SEMA3F-202ENST00000413852 TNRC6BQ9UPQ9 1833 aaKnown RBP12.12□□□□□ -0.47
SEMA3F-202ENST00000413852 FOXF2Q12947 444 aa12.12□□□□□ -0.47
SEMA3F-202ENST00000413852 ACSF3Q4G176 576 aaPredicted RBP12.12□□□□□ -0.47
SEMA3F-202ENST00000413852 LINC00596Q86U02 117 aa12.12□□□□□ -0.47
SEMA3F-202ENST00000413852 MRPL18Q9H0U6 180 aaKnown RBP12.12□□□□□ -0.47
SEMA3F-202ENST00000413852 WIPI2Q9Y4P8 454 aa12.12□□□□□ -0.47
SEMA3F-202ENST00000413852 CSMD1Q96PZ7 3565 aa12.12□□□□□ -0.47
SEMA3F-202ENST00000413852 SMPD2O60906 423 aa12.12□□□□□ -0.47
SEMA3F-202ENST00000413852 GATA2P23769 480 aaPredicted RBP12.12□□□□□ -0.47
SEMA3F-202ENST00000413852 EIF4EBP1Q13541 118 aaPredicted RBP12.12□□□□□ -0.47
SEMA3F-202ENST00000413852 PMS2CLQ68D20 193 aa12.12□□□□□ -0.47
SEMA3F-202ENST00000413852 TREML4Q6UXN2 200 aa12.12□□□□□ -0.47
SEMA3F-202ENST00000413852 C1orf229Q6ZS94 237 aaPredicted RBP12.12□□□□□ -0.47
SEMA3F-202ENST00000413852 R3HDM4Q96D70 268 aa12.12□□□□□ -0.47
SEMA3F-202ENST00000413852 HINT2Q9BX68 163 aa12.12□□□□□ -0.47
SEMA3F-202ENST00000413852 PARD6GQ9BYG4 376 aaPredicted RBP12.12□□□□□ -0.47
SEMA3F-202ENST00000413852 GP6Q9HCN6 339 aa12.12□□□□□ -0.47
SEMA3F-202ENST00000413852 HEYLQ9NQ87 328 aaPredicted RBP12.12□□□□□ -0.47
SEMA3F-202ENST00000413852 FOXJ2Q9P0K8 574 aa12.12□□□□□ -0.47
SEMA3F-202ENST00000413852 MAP1BP46821 2468 aaKnown RBP12.12□□□□□ -0.47
SEMA3F-202ENST00000413852 FABP6P51161 128 aa12.11□□□□□ -0.47
SEMA3F-202ENST00000413852 KRTDAPP60985 99 aa12.11□□□□□ -0.47
SEMA3F-202ENST00000413852 ATOH7Q8N100 152 aa12.11□□□□□ -0.47
SEMA3F-202ENST00000413852 RYDENQ9NUL5 291 aaKnown RBP12.11□□□□□ -0.47
SEMA3F-202ENST00000413852 TNCP24821 2201 aa12.11□□□□□ -0.47
SEMA3F-202ENST00000413852 ATMQ13315 3056 aa12.11□□□□□ -0.47
SEMA3F-202ENST00000413852 KIR2DL5BA0A0G2JN68 375 aa12.11□□□□□ -0.47
SEMA3F-202ENST00000413852 KIR2DL5BA0A0G2JPC4 375 aa12.11□□□□□ -0.47
SEMA3F-202ENST00000413852 MBP02144 154 aa12.11□□□□□ -0.47
SEMA3F-202ENST00000413852 OR10J1P30954 320 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms