RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 NUBP2Q9Y5Y2 271 aa10.31□□□□□ -0.76
HDAC8-210ENST00000412342 TRAV41A0A0B4J266 112 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 TCRBV4S1A1TA0A5B7 111 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 GPR31O00270 319 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 SOX15O60248 233 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 PGLYRP1O75594 196 aaPredicted RBP10.3□□□□□ -0.76
HDAC8-210ENST00000412342 IGLV1-40P01703 118 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 OPN1MWP04001 364 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 CSF1P09603 554 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 OPN1MW2P0DN77 364 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 OPN1MW3P0DN78 364 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 VDAC1P21796 283 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 PSMB8P28062 276 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 ETV6P41212 452 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 KIR2DS2P43631 304 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 TSPAN5P62079 268 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 FOXE3Q13461 319 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 NSUN5P1Q3KNT7 163 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 VMA21Q3ZAQ7 101 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 STEAP1BQ6NZ63 245 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 TEX38Q6PEX7 206 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 IDO2Q6ZQW0 420 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 LCNL1Q6ZST4 164 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 VKORC1L1Q8N0U8 176 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 SPAG16Q8N0X2 631 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 PUSL1Q8N0Z8 303 aaKnown RBP10.3□□□□□ -0.76
HDAC8-210ENST00000412342 OR6Q1Q8NGQ2 317 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 TRIM63Q969Q1 353 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 FAM103A1Q9BTL3 118 aaKnown RBP10.3□□□□□ -0.76
HDAC8-210ENST00000412342 GON7Q9BXV9 100 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 WSB1Q9Y6I7 421 aa10.3□□□□□ -0.76
HDAC8-210ENST00000412342 ANKRD20A5PA0PJZ0 165 aa10.29□□□□□ -0.76
HDAC8-210ENST00000412342 RAB3DO95716 219 aa10.29□□□□□ -0.76
HDAC8-210ENST00000412342 RLN1P04808 185 aa10.29□□□□□ -0.76
HDAC8-210ENST00000412342 RPLP1P05386 114 aaKnown RBP10.29□□□□□ -0.76
HDAC8-210ENST00000412342 ELANEP08246 267 aa10.29□□□□□ -0.76
HDAC8-210ENST00000412342 RPL23AP62750 156 aaKnown RBP10.29□□□□□ -0.76
HDAC8-210ENST00000412342 CATR1Q13166 79 aa10.29□□□□□ -0.76
HDAC8-210ENST00000412342 KIAA0141Q14154 515 aaPredicted RBP10.29□□□□□ -0.76
HDAC8-210ENST00000412342 POU2AF1Q16633 256 aa10.29□□□□□ -0.76
HDAC8-210ENST00000412342 PRSS8Q16651 343 aa10.29□□□□□ -0.76
HDAC8-210ENST00000412342 ASPHD1Q5U4P2 390 aa10.29□□□□□ -0.76
HDAC8-210ENST00000412342 FAAP20Q6NZ36 180 aa10.29□□□□□ -0.76
HDAC8-210ENST00000412342 C18orf65Q6ZTR6 163 aa10.29□□□□□ -0.76
HDAC8-210ENST00000412342 OR4C16Q8NGL9 310 aa10.29□□□□□ -0.76
HDAC8-210ENST00000412342 OR51H1Q8NH63 302 aa10.29□□□□□ -0.76
HDAC8-210ENST00000412342 ARPC1AQ92747 370 aa10.29□□□□□ -0.76
HDAC8-210ENST00000412342 A0A1W2PRX2 142 aa10.28□□□□□ -0.76
HDAC8-210ENST00000412342 IL6RP08887 468 aaPredicted RBP10.28□□□□□ -0.76
HDAC8-210ENST00000412342 S100A5P33763 92 aa10.28□□□□□ -0.76
HDAC8-210ENST00000412342 FXYD3Q14802 87 aa10.28□□□□□ -0.76
HDAC8-210ENST00000412342 ECSCRQ19T08 205 aa10.28□□□□□ -0.76
HDAC8-210ENST00000412342 ZNF585BQ52M93 769 aa10.28□□□□□ -0.76
HDAC8-210ENST00000412342 PHLDA2Q53GA4 152 aa10.28□□□□□ -0.76
HDAC8-210ENST00000412342 AKIRIN2Q53H80 203 aa10.28□□□□□ -0.76
HDAC8-210ENST00000412342 SLC38A6Q8IZM9 456 aa10.28□□□□□ -0.76
HDAC8-210ENST00000412342 KLK15Q9H2R5 256 aa10.28□□□□□ -0.76
HDAC8-210ENST00000412342 ZNF430Q9H8G1 570 aaPredicted RBP10.28□□□□□ -0.76
HDAC8-210ENST00000412342 ZFP57Q9NU63 452 aa10.28□□□□□ -0.76
HDAC8-210ENST00000412342 A6NHS1 94 aa10.27□□□□□ -0.77
HDAC8-210ENST00000412342 KBTBD11O94819 623 aa10.27□□□□□ -0.77
HDAC8-210ENST00000412342 S1PR2O95136 353 aa10.27□□□□□ -0.77
HDAC8-210ENST00000412342 HPRT1P00492 218 aa10.27□□□□□ -0.77
HDAC8-210ENST00000412342 IFNA6P05013 189 aa10.27□□□□□ -0.77
HDAC8-210ENST00000412342 AKAIN1P0CW23 69 aa10.27□□□□□ -0.77
HDAC8-210ENST00000412342 F2RP25116 425 aa10.27□□□□□ -0.77
HDAC8-210ENST00000412342 PTBP1P26599 531 aaKnown RBP eCLIP10.27□□□□□ -0.776e-21■■■■■ 45.1
HDAC8-210ENST00000412342 TAS2R31P59538 309 aa10.27□□□□□ -0.77
HDAC8-210ENST00000412342 RND3P61587 244 aa10.27□□□□□ -0.77
HDAC8-210ENST00000412342 MEF2DQ14814 521 aa10.27□□□□□ -0.77
HDAC8-210ENST00000412342 LPCAT3Q6P1A2 487 aa10.27□□□□□ -0.77
HDAC8-210ENST00000412342 ETV3LQ6ZN32 361 aa10.27□□□□□ -0.77
HDAC8-210ENST00000412342 CMTM1Q8IZ96 169 aa10.27□□□□□ -0.77
HDAC8-210ENST00000412342 TCTEX1D1Q8N7M0 179 aa10.27□□□□□ -0.77
HDAC8-210ENST00000412342 LFNGQ8NES3 379 aa10.27□□□□□ -0.77
HDAC8-210ENST00000412342 OR13C8Q8NGS7 320 aa10.27□□□□□ -0.77
HDAC8-210ENST00000412342 TERB2Q8NHR7 220 aa10.27□□□□□ -0.77
HDAC8-210ENST00000412342 GRPEL2Q8TAA5 225 aa10.27□□□□□ -0.77
HDAC8-210ENST00000412342 FAM110DQ8TAY7 271 aaPredicted RBP10.27□□□□□ -0.77
HDAC8-210ENST00000412342 TMEM167AQ8TBQ9 72 aa10.27□□□□□ -0.77
HDAC8-210ENST00000412342 RHOVQ96L33 236 aa10.27□□□□□ -0.77
HDAC8-210ENST00000412342 THAP7Q9BT49 309 aaPredicted RBP10.27□□□□□ -0.77
HDAC8-210ENST00000412342 SRRQ9GZT4 340 aa10.27□□□□□ -0.77
HDAC8-210ENST00000412342 PLEKHA2Q9HB19 425 aa10.27□□□□□ -0.77
HDAC8-210ENST00000412342 SLC2A9Q9NRM0 540 aa10.27□□□□□ -0.77
HDAC8-210ENST00000412342 FOXA2Q9Y261 457 aaPredicted RBP10.27□□□□□ -0.77
HDAC8-210ENST00000412342 A0A1W2PN81 502 aa10.26□□□□□ -0.77
HDAC8-210ENST00000412342 OR2A4O95047 310 aa10.26□□□□□ -0.77
HDAC8-210ENST00000412342 HRASP01112 189 aa10.26□□□□□ -0.77
HDAC8-210ENST00000412342 CHRNA7P36544 502 aa10.26□□□□□ -0.77
HDAC8-210ENST00000412342 PPP5CP53041 499 aa10.26□□□□□ -0.77
HDAC8-210ENST00000412342 GNB1P62873 340 aa10.26□□□□□ -0.77
HDAC8-210ENST00000412342 KLF9Q13886 244 aaPredicted RBP10.26□□□□□ -0.77
HDAC8-210ENST00000412342 CXorf66Q5JRM2 361 aaPredicted RBP10.26□□□□□ -0.77
HDAC8-210ENST00000412342 KHDC1LQ5JSQ8 128 aa10.26□□□□□ -0.77
HDAC8-210ENST00000412342 C10orf55Q5SWW7 151 aa10.26□□□□□ -0.77
HDAC8-210ENST00000412342 OR4A47Q6IF82 309 aa10.26□□□□□ -0.77
HDAC8-210ENST00000412342 UNQ5815/PRO19632Q6UWF5 114 aa10.26□□□□□ -0.77
HDAC8-210ENST00000412342 TBC1D26Q86UD7 250 aa10.26□□□□□ -0.77
HDAC8-210ENST00000412342 MMD2Q8IY49 270 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms