RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 TMEM127O75204 238 aa12.67□□□□□ -0.38
SCRN1-203ENST00000409570 OR9G9P0C7N8 305 aa12.67□□□□□ -0.38
SCRN1-203ENST00000409570 RAB6AP20340 208 aa12.67□□□□□ -0.38
SCRN1-203ENST00000409570 RHOGP84095 191 aa12.67□□□□□ -0.38
SCRN1-203ENST00000409570 EWSR1Q01844 656 aaKnown RBP eCLIP12.67□□□□□ -0.38
SCRN1-203ENST00000409570 ZNF45Q02386 682 aa12.67□□□□□ -0.38
SCRN1-203ENST00000409570 C2orf76Q3KRA6 126 aa12.67□□□□□ -0.38
SCRN1-203ENST00000409570 RPP25LQ8N5L8 163 aaKnown RBP12.67□□□□□ -0.38
SCRN1-203ENST00000409570 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.67□□□□□ -0.38
SCRN1-203ENST00000409570 OR56B1Q8NGI3 324 aa12.67□□□□□ -0.38
SCRN1-203ENST00000409570 PHB2Q99623 299 aa12.67□□□□□ -0.38
SCRN1-203ENST00000409570 LPAR5Q9H1C0 372 aa12.67□□□□□ -0.38
SCRN1-203ENST00000409570 RIMS4Q9H426 269 aaPredicted RBP12.67□□□□□ -0.38
SCRN1-203ENST00000409570 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.66□□□□□ -0.38
SCRN1-203ENST00000409570 TRBV9A0A0B4J1U6 114 aa12.66□□□□□ -0.38
SCRN1-203ENST00000409570 NUPR2A6NF83 97 aa12.66□□□□□ -0.38
SCRN1-203ENST00000409570 FAM223BA6NKX1 122 aa12.66□□□□□ -0.38
SCRN1-203ENST00000409570 PRH1P02810 166 aa12.66□□□□□ -0.38
SCRN1-203ENST00000409570 FOLR2P14207 255 aa12.66□□□□□ -0.38
SCRN1-203ENST00000409570 TMEM177Q53S58 311 aa12.66□□□□□ -0.38
SCRN1-203ENST00000409570 HES5Q5TA89 166 aa12.66□□□□□ -0.38
SCRN1-203ENST00000409570 FAM223AQ8IWN6 122 aa12.66□□□□□ -0.38
SCRN1-203ENST00000409570 OR51E2Q9H255 320 aa12.66□□□□□ -0.38
SCRN1-203ENST00000409570 Q9N2K0 584 aa12.66□□□□□ -0.38
SCRN1-203ENST00000409570 TECRQ9NZ01 308 aaKnown RBP12.66□□□□□ -0.38
SCRN1-203ENST00000409570 MGAT4AQ9UM21 535 aa12.66□□□□□ -0.38
SCRN1-203ENST00000409570 DMRT1Q9Y5R6 373 aa12.66□□□□□ -0.38
SCRN1-203ENST00000409570 METTL21EPA6NDL7 271 aa12.65□□□□□ -0.38
SCRN1-203ENST00000409570 SOCS1O15524 211 aa12.65□□□□□ -0.38
SCRN1-203ENST00000409570 GADD45AP24522 165 aa12.65□□□□□ -0.38
SCRN1-203ENST00000409570 CLDN12P56749 244 aa12.65□□□□□ -0.38
SCRN1-203ENST00000409570 SCAND1P57086 179 aa12.65□□□□□ -0.38
SCRN1-203ENST00000409570 OR10A3P58181 314 aa12.65□□□□□ -0.38
SCRN1-203ENST00000409570 ATP5G2Q06055 141 aa12.65□□□□□ -0.38
SCRN1-203ENST00000409570 CEMP1Q6PRD7 247 aaPredicted RBP12.65□□□□□ -0.38
SCRN1-203ENST00000409570 KCTD12Q96CX2 325 aaKnown RBP12.65□□□□□ -0.38
SCRN1-203ENST00000409570 C5orf30Q96GV9 206 aa12.65□□□□□ -0.38
SCRN1-203ENST00000409570 GGTLC1Q9BX51 225 aa12.65□□□□□ -0.38
SCRN1-203ENST00000409570 RDH8Q9NYR8 311 aa12.65□□□□□ -0.38
SCRN1-203ENST00000409570 SELENOKQ9Y6D0 94 aa12.65□□□□□ -0.38
SCRN1-203ENST00000409570 A0A0J9YWU9 116 aa12.64□□□□□ -0.39
SCRN1-203ENST00000409570 LOC100506127A0A0U1RQW1 187 aa12.64□□□□□ -0.39
SCRN1-203ENST00000409570 TMEM272A0A1B0GTI8 110 aa12.64□□□□□ -0.39
SCRN1-203ENST00000409570 PPP5D1E7EU14 171 aa12.64□□□□□ -0.39
SCRN1-203ENST00000409570 SHOXO15266 292 aa12.64□□□□□ -0.39
SCRN1-203ENST00000409570 ARL6IP1Q15041 203 aa12.64□□□□□ -0.39
SCRN1-203ENST00000409570 TNXAQ16473 311 aa12.64□□□□□ -0.39
SCRN1-203ENST00000409570 CROCCP3Q8IVE0 287 aa12.64□□□□□ -0.39
SCRN1-203ENST00000409570 SRSF12Q8WXF0 261 aaKnown RBP12.64□□□□□ -0.39
SCRN1-203ENST00000409570 SDHAF2Q9NX18 166 aa12.64□□□□□ -0.39
SCRN1-203ENST00000409570 PCLOQ9Y6V0 5065 aa12.63□□□□□ -0.39
SCRN1-203ENST00000409570 VPS13DQ5THJ4 4388 aa12.63□□□□□ -0.39
SCRN1-203ENST00000409570 LOC102724200A0A096LPH7 203 aaPredicted RBP12.63□□□□□ -0.39
SCRN1-203ENST00000409570 TUSC2O75896 110 aa12.63□□□□□ -0.39
SCRN1-203ENST00000409570 SCGNO76038 276 aa12.63□□□□□ -0.39
SCRN1-203ENST00000409570 SDC2P34741 201 aa12.63□□□□□ -0.39
SCRN1-203ENST00000409570 PRSS8Q16651 343 aa12.63□□□□□ -0.39
SCRN1-203ENST00000409570 SFXN4Q6P4A7 337 aa12.63□□□□□ -0.39
SCRN1-203ENST00000409570 SLC16A13Q7RTY0 426 aa12.63□□□□□ -0.39
SCRN1-203ENST00000409570 TMEM61Q8N0U2 210 aa12.63□□□□□ -0.39
SCRN1-203ENST00000409570 TEX45Q8NA69 505 aa12.63□□□□□ -0.39
SCRN1-203ENST00000409570 CACNG8Q8WXS5 425 aa12.63□□□□□ -0.39
SCRN1-203ENST00000409570 YIPF6Q96EC8 236 aa12.63□□□□□ -0.39
SCRN1-203ENST00000409570 OR2D2Q9H210 308 aa12.63□□□□□ -0.39
SCRN1-203ENST00000409570 DNAH6Q9C0G6 4158 aa12.62□□□□□ -0.39
SCRN1-203ENST00000409570 FOXI3A8MTJ6 420 aaPredicted RBP12.62□□□□□ -0.39
SCRN1-203ENST00000409570 LGALS9O00182 355 aa12.62□□□□□ -0.39
SCRN1-203ENST00000409570 MPPED1O15442 326 aa12.62□□□□□ -0.39
SCRN1-203ENST00000409570 DEDDO75618 318 aa12.62□□□□□ -0.39
SCRN1-203ENST00000409570 HLA-AP01891 365 aaKnown RBP12.62□□□□□ -0.39
SCRN1-203ENST00000409570 TMEM50BP56557 158 aa12.62□□□□□ -0.39
SCRN1-203ENST00000409570 UBE2KP61086 200 aa12.62□□□□□ -0.39
SCRN1-203ENST00000409570 TNFRSF9Q07011 255 aa12.62□□□□□ -0.39
SCRN1-203ENST00000409570 NR2C2APQ86WQ0 139 aa12.62□□□□□ -0.39
SCRN1-203ENST00000409570 WFDC3Q8IUB2 231 aa12.62□□□□□ -0.39
SCRN1-203ENST00000409570 CENPOQ9BU64 300 aa12.62□□□□□ -0.39
SCRN1-203ENST00000409570 C12orf4Q9NQ89 552 aa12.62□□□□□ -0.39
SCRN1-203ENST00000409570 TRDCB7Z8K6 153 aa12.61□□□□□ -0.39
SCRN1-203ENST00000409570 OR2J3O76001 311 aa12.61□□□□□ -0.39
SCRN1-203ENST00000409570 OR2C1O95371 312 aa12.61□□□□□ -0.39
SCRN1-203ENST00000409570 CD3GP09693 182 aa12.61□□□□□ -0.39
SCRN1-203ENST00000409570 CBLN1P23435 193 aa12.61□□□□□ -0.39
SCRN1-203ENST00000409570 MRPS15P82914 257 aaKnown RBP12.61□□□□□ -0.39
SCRN1-203ENST00000409570 TAGLNQ01995 201 aaKnown RBP12.61□□□□□ -0.39
SCRN1-203ENST00000409570 CBX3Q13185 183 aa12.61□□□□□ -0.39
SCRN1-203ENST00000409570 RTL8BQ17RB0 113 aa12.61□□□□□ -0.39
SCRN1-203ENST00000409570 VMA21Q3ZAQ7 101 aa12.61□□□□□ -0.39
SCRN1-203ENST00000409570 IDO2Q6ZQW0 420 aa12.61□□□□□ -0.39
SCRN1-203ENST00000409570 LYG2Q86SG7 212 aa12.61□□□□□ -0.39
SCRN1-203ENST00000409570 NECAP1Q8NC96 275 aa12.61□□□□□ -0.39
SCRN1-203ENST00000409570 OR10R2Q8NGX6 335 aa12.61□□□□□ -0.39
SCRN1-203ENST00000409570 ACOT12Q8WYK0 555 aa12.61□□□□□ -0.39
SCRN1-203ENST00000409570 RAB3CQ96E17 227 aa12.61□□□□□ -0.39
SCRN1-203ENST00000409570 PECRQ9BY49 303 aa12.61□□□□□ -0.39
SCRN1-203ENST00000409570 MRPS26Q9BYN8 205 aaKnown RBP12.61□□□□□ -0.39
SCRN1-203ENST00000409570 DAPK2Q9UIK4 370 aa12.61□□□□□ -0.39
SCRN1-203ENST00000409570 KIAA1109Q2LD37 5005 aa12.61□□□□□ -0.39
SCRN1-203ENST00000409570 RYR1P21817 5038 aa12.6□□□□□ -0.39
SCRN1-203ENST00000409570 GGCTO75223 188 aaKnown RBP12.6□□□□□ -0.39
SCRN1-203ENST00000409570 NDUFB8O95169 186 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms