RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 AMMECR1Q9Y4X0 333 aaPredicted RBP11.4□□□□□ -0.59
GPNMB-203ENST00000409458 KPTNQ9Y664 436 aa11.4□□□□□ -0.59
GPNMB-203ENST00000409458 ODF3BA8MYP8 253 aa11.39□□□□□ -0.59
GPNMB-203ENST00000409458 H7C2Y5 167 aa11.39□□□□□ -0.59
GPNMB-203ENST00000409458 FOXH1O75593 365 aa11.39□□□□□ -0.59
GPNMB-203ENST00000409458 RRASP10301 218 aa11.39□□□□□ -0.59
GPNMB-203ENST00000409458 HOXB4P17483 251 aaPredicted RBP11.39□□□□□ -0.59
GPNMB-203ENST00000409458 CAV2P51636 162 aa11.39□□□□□ -0.59
GPNMB-203ENST00000409458 EWSR1Q01844 656 aaKnown RBP eCLIP11.39□□□□□ -0.59
GPNMB-203ENST00000409458 POU2AF1Q16633 256 aa11.39□□□□□ -0.59
GPNMB-203ENST00000409458 LDLRAD2Q5SZI1 272 aa11.39□□□□□ -0.59
GPNMB-203ENST00000409458 OR4A47Q6IF82 309 aa11.39□□□□□ -0.59
GPNMB-203ENST00000409458 C1orf122Q6ZSJ8 110 aa11.39□□□□□ -0.59
GPNMB-203ENST00000409458 PDPNQ86YL7 162 aa11.39□□□□□ -0.59
GPNMB-203ENST00000409458 ST8SIA2Q92186 375 aa11.39□□□□□ -0.59
GPNMB-203ENST00000409458 RHOVQ96L33 236 aa11.39□□□□□ -0.59
GPNMB-203ENST00000409458 PCGF1Q9BSM1 259 aa11.39□□□□□ -0.59
GPNMB-203ENST00000409458 SMIM3Q9BZL3 60 aa11.39□□□□□ -0.59
GPNMB-203ENST00000409458 RBKSQ9H477 322 aa11.39□□□□□ -0.59
GPNMB-203ENST00000409458 LPAR2Q9HBW0 351 aa11.39□□□□□ -0.59
GPNMB-203ENST00000409458 SRRM4A7MD48 611 aaKnown RBP11.38□□□□□ -0.59
GPNMB-203ENST00000409458 H3BP45 60 aa11.38□□□□□ -0.59
GPNMB-203ENST00000409458 LY6LH3BQJ8 138 aa11.38□□□□□ -0.59
GPNMB-203ENST00000409458 RBMXL2O75526 392 aaKnown RBP11.38□□□□□ -0.59
GPNMB-203ENST00000409458 HRASP01112 189 aa11.38□□□□□ -0.59
GPNMB-203ENST00000409458 UBE2KP61086 200 aa11.38□□□□□ -0.59
GPNMB-203ENST00000409458 RELBQ01201 579 aa11.38□□□□□ -0.59
GPNMB-203ENST00000409458 TAGLNQ01995 201 aaKnown RBP11.38□□□□□ -0.59
GPNMB-203ENST00000409458 GPR157Q5UAW9 335 aa11.38□□□□□ -0.59
GPNMB-203ENST00000409458 PDZD9Q8IXQ8 264 aa11.38□□□□□ -0.59
GPNMB-203ENST00000409458 RAB40CQ96S21 281 aa11.38□□□□□ -0.59
GPNMB-203ENST00000409458 UNKLQ9H9P5 680 aaKnown RBP11.38□□□□□ -0.59
GPNMB-203ENST00000409458 USP9YO00507 2555 aaPredicted RBP11.37□□□□□ -0.59
GPNMB-203ENST00000409458 ABCA2Q9BZC7 2435 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 IGHV3-72A0A0B4J1Y9 119 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 RNASEK-C17orf49H0YIS7 233 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 SHOXO15266 292 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 IFNA7P01567 189 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 ARHGDIBP52566 201 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 NHLH2Q02577 135 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 AARDQ4LEZ3 155 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 TMEM177Q53S58 311 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 SPINK9Q5DT21 86 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 HIST2H2BCQ6DN03 193 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 ALKAL2Q6UX46 152 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 TMEM252Q8N6L7 170 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 OR4A16Q8NH70 328 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 ZDHHC16Q969W1 377 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 MARVELD3Q96A59 401 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 RPEQ96AT9 228 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 HARBI1Q96MB7 349 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 PSMG3-AS1Q96PY0 264 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 UBQLN2Q9UHD9 624 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 POLR3KQ9Y2Y1 108 aaPredicted RBP11.37□□□□□ -0.59
GPNMB-203ENST00000409458 WASHC3Q9Y3C0 194 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 WSB1Q9Y6I7 421 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 CSMD2Q7Z408 3487 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 NBPF19A0A087WUL8 3843 aa11.37□□□□□ -0.59
GPNMB-203ENST00000409458 IGHV1-3A0A0C4DH29 117 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 A0A1W2PRD5 423 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 A0A1W2PRF3 423 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 A0A1W2PRM7 423 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 SAA1P0DJI8 122 aaPredicted RBP11.36□□□□□ -0.59
GPNMB-203ENST00000409458 RAB13P51153 203 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 DVL1P1P54792 670 aaPredicted RBP11.36□□□□□ -0.59
GPNMB-203ENST00000409458 DSCR9P59020 149 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 RPL23AP62750 156 aaKnown RBP11.36□□□□□ -0.59
GPNMB-203ENST00000409458 CLEC12BQ2HXU8 276 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 TPTE2P1Q5T6R2 138 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 STOML3Q8TAV4 291 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 OSR1Q8TAX0 266 aaPredicted RBP11.36□□□□□ -0.59
GPNMB-203ENST00000409458 FLYWCH2Q96CP2 140 aaKnown RBP11.36□□□□□ -0.59
GPNMB-203ENST00000409458 TBX15Q96SF7 602 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 PSENENQ9NZ42 101 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 TET2Q6N021 2002 aaPredicted RBP11.36□□□□□ -0.59
GPNMB-203ENST00000409458 CELSR2Q9HCU4 2923 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 A0A1W2PPI3 338 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 C15orf61A6NNL5 157 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 TXNL1O43396 289 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 MED6O75586 246 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 TOX4O94842 621 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 GAPDHP04406 335 aaKnown RBP11.36□□□□□ -0.59
GPNMB-203ENST00000409458 IL6RP08887 468 aaPredicted RBP11.36□□□□□ -0.59
GPNMB-203ENST00000409458 HTR1DP28221 377 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 HTR2BP41595 481 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 TMEM267Q0VDI3 215 aaPredicted RBP11.36□□□□□ -0.59
GPNMB-203ENST00000409458 RPL7L1Q6DKI1 246 aaKnown RBP11.36□□□□□ -0.59
GPNMB-203ENST00000409458 LHFPL4Q7Z7J7 247 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 OR4C13Q8NGP0 309 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 LHX4Q969G2 390 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 SMIM8Q96KF7 97 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 SLC25A31Q9H0C2 315 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 WFDC1Q9HC57 220 aa11.36□□□□□ -0.59
GPNMB-203ENST00000409458 SPG11Q96JI7 2443 aa11.35□□□□□ -0.59
GPNMB-203ENST00000409458 TAAR5O14804 337 aa11.35□□□□□ -0.59
GPNMB-203ENST00000409458 TPT1P13693 172 aaKnown RBP11.35□□□□□ -0.59
GPNMB-203ENST00000409458 MC5RP33032 325 aa11.35□□□□□ -0.59
GPNMB-203ENST00000409458 MOB3BQ86TA1 216 aa11.35□□□□□ -0.59
GPNMB-203ENST00000409458 PUSL1Q8N0Z8 303 aaKnown RBP11.35□□□□□ -0.59
GPNMB-203ENST00000409458 DTD1Q8TEA8 209 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms